Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-546
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 146
               

               Conread position:
               25-562
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               372, 102
               

               Conread position:
               42-566
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               347
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               95-582
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               170-402
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               170-582
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               178-532
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               182-562
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               185-561
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               140, 11
               

               Conread position:
               187-554
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               132, 10
               

               Conread position:
               188-409
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               188-413
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               8, 44
               

               Conread position:
               188-582
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 44
               

               Conread position:
               189-486
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               190-433
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               235, 7
               

               Conread position:
               190-543
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               137, 6
               

               Conread position:
               190-553
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 6
               

               Conread position:
               194-483
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               173, 183
               

               Conread position:
               195-404
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               195-430
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               195-430
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               132, 184
               

               Conread position:
               195-434
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               195-439
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               195-450
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               136, 179
               

               Conread position:
               195-452
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 36
               

               Conread position:
               195-452
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               130, 36
               

               Conread position:
               195-469
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               220, 36
               

               Conread position:
               195-472
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               239, 19
               

               Conread position:
               195-488
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               120, 36
               

               Conread position:
               195-543
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               136, 151
               

               Conread position:
               195-548
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               195-558
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               195-558
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               120, 36
               

               Conread position:
               195-566
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               122, 36
               

               Conread position:
               195-566
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               128, 36
               

               Conread position:
               195-571
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 34
               

               Conread position:
               196-423
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               196-531
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               196-566
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               135, 35
               

               Conread position:
               196-566
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               94, 107
               

               Conread position:
               196-582
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 28
               

               Conread position:
               196-582
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               197-531
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               134, 27
               

               Conread position:
               198-543
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               133, 11
               

               Conread position:
               201-558
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               130, 28
               

               Conread position:
               202-413
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               202-414
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 27
               

               Conread position:
               203-433
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               203-536
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               130, 28
               

               Conread position:
               203-539
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               203-542
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               203-542
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               128, 21
               

               Conread position:
               204-450
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               117, 20
               

               Conread position:
               204-480
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               207-543
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               218, 17
               

               Conread position:
               207-565
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               145, 33
               

               Conread position:
               207-582
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 23
               

               Conread position:
               207-582
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 24
               

               Conread position:
               207-582
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               280
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               199, 95
               

               Conread position:
               208-431
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               209-404
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               210-573
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               212-562
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               217-566
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               307, 14
               

               Conread position:
               220-578
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 90
               

               Conread position:
               223-539
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               223-543
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               102, 154
               

               Conread position:
               227-429
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               198, 47
               

               Conread position:
               230-540
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               86, 174
               

               Conread position:
               231-435
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               232-484
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               235-582
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               244-433
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 137
               

               Conread position:
               244-557
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               92, 121
               

               Conread position:
               245-566
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               70, 126
               

               Conread position:
               254-571
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               255-582
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               260-434
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 116
               

               Conread position:
               270-486
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 108
               

               Conread position:
               270-534
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               270-571
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               300-552
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               314-538
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               331-552
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               86, 18
               

               Conread position:
               356-582
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               387-582
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               430-582
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 61
               
Show alignments to all cow chromosomes.