Cow genome map
Conread name: | rgul0117_o20.y1 |
Conread position: | 1-546 |
Cow position: | chr19:19661567-19662122 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 146 |
Conread position: | 25-562 |
Cow position: | chr19:35064617-35064097 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 372, 102 |
Conread position: | 42-566 |
Cow position: | chr19:14347586-14348110 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 347 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 10, 98 |
Conread position: | 95-582 |
Cow position: | chr19:42092570-42092100 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 38 |
Conread position: | 170-402 |
Cow position: | chr19:30435923-30436164 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 176 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 34, 19 |
Conread position: | 170-582 |
Cow position: | chr19:36478595-36479016 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 11 |
Conread position: | 178-532 |
Cow position: | chr19:4599791-4600129 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 182-562 |
Cow position: | chr19:21285371-21284987 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 269 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 106, 7 |
Conread position: | 185-561 |
Cow position: | chr19:9387350-9387727 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 264 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 140, 11 |
Conread position: | 187-554 |
Cow position: | chr19:40714878-40715227 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 252 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 132, 10 |
Conread position: | 188-409 |
Cow position: | chr19:38396553-38396340 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 170 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 188-413 |
Cow position: | chr19:8839320-8839545 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 8, 44 |
Conread position: | 188-582 |
Cow position: | chr19:20699806-20700202 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 44 |
Conread position: | 189-486 |
Cow position: | chr19:18788386-18788085 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 205 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 45, 14 |
Conread position: | 190-433 |
Cow position: | chr19:10786638-10786404 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 235, 7 |
Conread position: | 190-543 |
Cow position: | chr19:36977195-36976836 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 249 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 137, 6 |
Conread position: | 190-553 |
Cow position: | chr19:3177829-3178174 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 6 |
Conread position: | 194-483 |
Cow position: | chr19:6556677-6556968 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 189 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 173, 183 |
Conread position: | 195-404 |
Cow position: | chr19:23005640-23005427 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 160 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 102, 36 |
Conread position: | 195-430 |
Cow position: | chr19:18786600-18786364 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 64, 38 |
Conread position: | 195-430 |
Cow position: | chr19:23785913-23786151 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 176 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 132, 184 |
Conread position: | 195-434 |
Cow position: | chr19:5656385-5656152 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 167 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 122, 29 |
Conread position: | 195-439 |
Cow position: | chr19:8033464-8033716 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 178 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 16, 37 |
Conread position: | 195-450 |
Cow position: | chr19:38392522-38392784 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 186 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 136, 179 |
Conread position: | 195-452 |
Cow position: | chr19:4445895-4445642 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 174 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 122, 36 |
Conread position: | 195-452 |
Cow position: | chr19:33912908-33912645 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 195 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 130, 36 |
Conread position: | 195-469 |
Cow position: | chr19:33932416-33932146 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 190 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 220, 36 |
Conread position: | 195-472 |
Cow position: | chr19:673-942 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 195 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 239, 19 |
Conread position: | 195-488 |
Cow position: | chr19:47727843-47727552 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 196 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 120, 36 |
Conread position: | 195-543 |
Cow position: | chr19:35741882-35742238 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 244 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 136, 151 |
Conread position: | 195-548 |
Cow position: | chr19:3084482-3084125 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 29 |
Conread position: | 195-558 |
Cow position: | chr19:22765342-22765712 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 36 |
Conread position: | 195-558 |
Cow position: | chr19:31595024-31595392 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 243 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 120, 36 |
Conread position: | 195-566 |
Cow position: | chr19:21198852-21199238 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 250 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 122, 36 |
Conread position: | 195-566 |
Cow position: | chr19:23304769-23304391 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 261 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 128, 36 |
Conread position: | 195-571 |
Cow position: | chr19:6515986-6516370 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 266 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 125, 34 |
Conread position: | 196-423 |
Cow position: | chr19:26086919-26087148 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 160 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 8, 37 |
Conread position: | 196-531 |
Cow position: | chr19:42205664-42205989 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 227 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 135, 28 |
Conread position: | 196-566 |
Cow position: | chr19:20671175-20670807 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 255 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 135, 35 |
Conread position: | 196-566 |
Cow position: | chr19:35540030-35540398 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 250 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 94, 107 |
Conread position: | 196-582 |
Cow position: | chr19:30746128-30746528 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 28 |
Conread position: | 196-582 |
Cow position: | chr19:31396164-31395778 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 28 |
Conread position: | 197-531 |
Cow position: | chr19:14592778-14593121 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 233 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 134, 27 |
Conread position: | 198-543 |
Cow position: | chr19:33468753-33469097 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 239 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 133, 11 |
Conread position: | 201-558 |
Cow position: | chr19:17795627-17795987 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 234 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 130, 28 |
Conread position: | 202-413 |
Cow position: | chr19:16694315-16694100 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 81, 22 |
Conread position: | 202-414 |
Cow position: | chr19:53037421-53037209 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 148 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 113, 27 |
Conread position: | 203-433 |
Cow position: | chr19:11171485-11171256 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 165 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 128, 28 |
Conread position: | 203-536 |
Cow position: | chr19:41212319-41211989 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 229 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 130, 28 |
Conread position: | 203-539 |
Cow position: | chr19:32214538-32214872 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 236 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 28, 78 |
Conread position: | 203-542 |
Cow position: | chr19:5552154-5551835 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 233 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 27, 96 |
Conread position: | 203-542 |
Cow position: | chr19:24144751-24145092 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 236 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 128, 21 |
Conread position: | 204-450 |
Cow position: | chr19:33033712-33033463 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 117, 20 |
Conread position: | 204-480 |
Cow position: | chr19:35782398-35782122 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 200 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 127, 20 |
Conread position: | 207-543 |
Cow position: | chr19:30533679-30534004 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 222 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 218, 17 |
Conread position: | 207-565 |
Cow position: | chr19:38340237-38339884 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 241 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 145, 33 |
Conread position: | 207-582 |
Cow position: | chr19:38545735-38546096 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 23 |
Conread position: | 207-582 |
Cow position: | chr19:42465751-42465386 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 24 |
Conread position: | 207-582 |
Cow position: | chr19:42706619-42706251 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 280 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 199, 95 |
Conread position: | 208-431 |
Cow position: | chr19:904721-904937 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 49, 16 |
Conread position: | 209-404 |
Cow position: | chr19:18242682-18242494 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 210-573 |
Cow position: | chr19:33685836-33686191 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 248 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 27, 46 |
Conread position: | 212-562 |
Cow position: | chr19:22863920-22863575 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 242 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 115, 19 |
Conread position: | 217-566 |
Cow position: | chr19:26976300-26975968 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 226 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 307, 14 |
Conread position: | 220-578 |
Cow position: | chr19:30052251-30051880 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 90 |
Conread position: | 223-539 |
Cow position: | chr19:6881126-6880803 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 221 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 65, 21 |
Conread position: | 223-543 |
Cow position: | chr19:43440915-43441244 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 224 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 102, 154 |
Conread position: | 227-429 |
Cow position: | chr19:13129638-13129832 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 198, 47 |
Conread position: | 230-540 |
Cow position: | chr19:1713384-1713065 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 222 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 86, 174 |
Conread position: | 231-435 |
Cow position: | chr19:28921584-28921788 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 148 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 100, 15 |
Conread position: | 232-484 |
Cow position: | chr19:19241852-19242121 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 203 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 99, 12 |
Conread position: | 235-582 |
Cow position: | chr19:28326665-28326315 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 44 |
Conread position: | 244-433 |
Cow position: | chr19:5185477-5185282 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 136 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 72, 137 |
Conread position: | 244-557 |
Cow position: | chr19:20292314-20292002 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 207 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 92, 121 |
Conread position: | 245-566 |
Cow position: | chr19:22134371-22134053 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 207 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 70, 126 |
Conread position: | 254-571 |
Cow position: | chr19:7404599-7404271 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 212 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 25, 36 |
Conread position: | 255-582 |
Cow position: | chr19:30452992-30452648 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 243 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 260-434 |
Cow position: | chr19:48960179-48960359 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 64, 116 |
Conread position: | 270-486 |
Cow position: | chr19:15936636-15936857 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 20, 108 |
Conread position: | 270-534 |
Cow position: | chr19:12107253-12107520 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 192 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 61, 40 |
Conread position: | 270-571 |
Cow position: | chr19:3081896-3082191 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 217 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 50, 23 |
Conread position: | 300-552 |
Cow position: | chr19:30265153-30264908 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 31, 62 |
Conread position: | 314-538 |
Cow position: | chr19:42274003-42273779 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 149 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 331-552 |
Cow position: | chr19:3585358-3585139 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 170 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 86, 18 |
Conread position: | 356-582 |
Cow position: | chr19:19991376-19991613 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 173 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 17, 5 |
Conread position: | 387-582 |
Cow position: | chr19:31287255-31287051 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 142 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 430-582 |
Cow position: | chr19:38396099-38395942 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 14, 61 |
Show alignments to all cow chromosomes.