Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-553
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 18
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               363
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 260
               

               Conread position:
               27-485
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               316
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               99, 152
               

               Conread position:
               31-531
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               393, 96
               

               Conread position:
               91-580
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               464, 36
               

               Conread position:
               99-582
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               165-423
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 5
               

               Conread position:
               176-489
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               185-511
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               188-450
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               188-564
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               189-553
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 7
               

               Conread position:
               190-399
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               190-433
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               141, 6
               

               Conread position:
               190-557
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               141, 6
               

               Conread position:
               190-571
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               179, 6
               

               Conread position:
               195-404
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 36
               

               Conread position:
               195-408
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               131, 36
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               195-424
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               157, 34
               

               Conread position:
               195-489
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               138, 36
               

               Conread position:
               195-489
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               149, 36
               

               Conread position:
               195-543
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               138, 34
               

               Conread position:
               195-547
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               220, 69
               

               Conread position:
               195-553
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               195-557
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               195-566
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               241, 36
               

               Conread position:
               195-566
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               195-582
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 36
               

               Conread position:
               196-520
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               77, 34
               

               Conread position:
               196-539
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               135, 35
               

               Conread position:
               197-413
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               121, 33
               

               Conread position:
               198-469
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               234, 33
               

               Conread position:
               198-553
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 196
               

               Conread position:
               198-578
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               133, 33
               

               Conread position:
               198-578
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               200-535
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 29
               

               Conread position:
               200-543
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               200-552
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               131, 31
               

               Conread position:
               202-531
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               203-404
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               149, 19
               

               Conread position:
               203-448
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               130, 21
               

               Conread position:
               203-489
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               203-541
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               203-546
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               203-561
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               204-422
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               204-430
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               204-566
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               111, 20
               

               Conread position:
               206-567
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               171, 64
               

               Conread position:
               207-469
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               124, 17
               

               Conread position:
               207-553
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 17
               

               Conread position:
               207-562
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               207-566
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               113, 13
               

               Conread position:
               207-580
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               209-564
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               140, 22
               

               Conread position:
               210-430
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               213-413
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               213-582
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               215-414
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               215-518
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               291, 19
               

               Conread position:
               215-578
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               221-442
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               224-566
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 92
               

               Conread position:
               224-566
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               225-434
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               226-571
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 153
               

               Conread position:
               228-582
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               188, 84
               

               Conread position:
               230-422
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               101, 122
               

               Conread position:
               233-444
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               243-413
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               109, 90
               

               Conread position:
               247-413
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               247-543
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               247-552
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               207, 84
               

               Conread position:
               263-569
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 109
               

               Conread position:
               265-494
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               268-562
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 127
               

               Conread position:
               275-555
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 90
               

               Conread position:
               276-582
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               278-561
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               137, 24
               

               Conread position:
               279-573
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 245
               

               Conread position:
               298-570
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               302-550
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               368-571
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               48, 122
               
Show alignments to all cow chromosomes.