Cow genome map
Conread name: | rgul0117_o20.y1 |
Conread position: | 1-552 |
Cow position: | chr23:3140423-3140948 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 99 |
Conread position: | 2-580 |
Cow position: | chr23:2436766-2436208 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 329, 113 |
Conread position: | 21-557 |
Cow position: | chr23:37224508-37223970 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 37 |
Conread position: | 22-539 |
Cow position: | chr23:25358296-25358808 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 343 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 104, 111 |
Conread position: | 122-413 |
Cow position: | chr23:4810415-4810709 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 198 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 17, 6 |
Conread position: | 146-543 |
Cow position: | chr23:4562579-4562975 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 271 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 187, 7 |
Conread position: | 156-448 |
Cow position: | chr23:19538296-19538004 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 203 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 42, 76 |
Conread position: | 166-577 |
Cow position: | chr23:21630945-21631343 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 290 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 30, 8 |
Conread position: | 177-553 |
Cow position: | chr23:9725503-9725145 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 271 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 99, 17 |
Conread position: | 183-510 |
Cow position: | chr23:645058-645385 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 230 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 133, 15 |
Conread position: | 187-534 |
Cow position: | chr23:16237529-16237168 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 257 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 16, 9 |
Conread position: | 188-553 |
Cow position: | chr23:10415294-10414924 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 8 |
Conread position: | 188-566 |
Cow position: | chr23:20435319-20434951 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 235 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 8, 43 |
Conread position: | 188-578 |
Cow position: | chr23:40526238-40525859 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 37 |
Conread position: | 189-573 |
Cow position: | chr23:792301-791914 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 56 |
Conread position: | 189-582 |
Cow position: | chr23:25408573-25408966 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 7 |
Conread position: | 190-543 |
Cow position: | chr23:19002334-19001979 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 247 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 141, 6 |
Conread position: | 193-413 |
Cow position: | chr23:38854999-38854781 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 162 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 9, 39 |
Conread position: | 194-436 |
Cow position: | chr23:3727664-3727417 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 176 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 136, 30 |
Conread position: | 195-404 |
Cow position: | chr23:361173-360969 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 9, 16 |
Conread position: | 195-413 |
Cow position: | chr23:10852790-10853007 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 164 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 122, 29 |
Conread position: | 195-413 |
Cow position: | chr23:12408773-12408554 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 36 |
Conread position: | 195-423 |
Cow position: | chr23:1605417-1605642 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 161 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 139, 36 |
Conread position: | 195-423 |
Cow position: | chr23:21452995-21452766 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 173 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 136, 36 |
Conread position: | 195-520 |
Cow position: | chr23:18802535-18802203 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 228 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 130, 36 |
Conread position: | 195-556 |
Cow position: | chr23:31607424-31607052 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 255 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 9, 102 |
Conread position: | 195-558 |
Cow position: | chr23:344440-344083 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 249 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 136, 36 |
Conread position: | 195-562 |
Cow position: | chr23:20752751-20753114 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 29 |
Conread position: | 195-566 |
Cow position: | chr23:1924095-1923725 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 252 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 120, 32 |
Conread position: | 196-419 |
Cow position: | chr23:14191289-14191514 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 165 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 12, 26 |
Conread position: | 196-434 |
Cow position: | chr23:9268329-9268569 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 171 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 135, 28 |
Conread position: | 196-543 |
Cow position: | chr23:13514921-13515273 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 249 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 220, 28 |
Conread position: | 196-564 |
Cow position: | chr23:5389440-5389809 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 192 |
Conread position: | 197-558 |
Cow position: | chr23:29034053-29034419 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 234 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 134, 36 |
Conread position: | 198-432 |
Cow position: | chr23:16881416-16881186 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 159 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 225, 33 |
Conread position: | 198-557 |
Cow position: | chr23:17092747-17092394 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 248 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 74, 33 |
Conread position: | 198-566 |
Cow position: | chr23:6592952-6592596 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 249 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 171, 26 |
Conread position: | 201-533 |
Cow position: | chr23:23284890-23285202 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 201-564 |
Cow position: | chr23:17000445-17000815 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 250 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 68, 28 |
Conread position: | 203-426 |
Cow position: | chr23:11473763-11473540 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 166 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 45, 21 |
Conread position: | 203-429 |
Cow position: | chr23:29459342-29459119 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 169 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 118, 21 |
Conread position: | 203-504 |
Cow position: | chr23:16610064-16609755 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 28 |
Conread position: | 203-533 |
Cow position: | chr23:21394824-21394495 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 232 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 25, 103 |
Conread position: | 203-562 |
Cow position: | chr23:9711843-9711488 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 246 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 79, 28 |
Conread position: | 203-575 |
Cow position: | chr23:7845033-7845413 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 255 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 9, 30 |
Conread position: | 204-405 |
Cow position: | chr23:14662249-14662057 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 146 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 204-413 |
Cow position: | chr23:26319164-26319373 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 149 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 152, 20 |
Conread position: | 204-433 |
Cow position: | chr23:2259850-2259621 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 165 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 123, 20 |
Conread position: | 204-559 |
Cow position: | chr23:24867049-24867415 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 238 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 123, 27 |
Conread position: | 204-566 |
Cow position: | chr23:6995222-6994870 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 234 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 209, 27 |
Conread position: | 206-493 |
Cow position: | chr23:38248649-38248928 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 211 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 111, 25 |
Conread position: | 207-401 |
Cow position: | chr23:11564589-11564400 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 152 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 124, 6 |
Conread position: | 207-553 |
Cow position: | chr23:5737977-5737622 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 248 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 113, 24 |
Conread position: | 209-564 |
Cow position: | chr23:15872949-15872582 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 248 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 122, 22 |
Conread position: | 210-578 |
Cow position: | chr23:3715518-3715882 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 21 |
Conread position: | 211-434 |
Cow position: | chr23:17606152-17605934 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 165 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 20, 60 |
Conread position: | 211-543 |
Cow position: | chr23:5603519-5603195 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 221 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 20, 87 |
Conread position: | 212-484 |
Cow position: | chr23:670375-670650 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 190 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 115, 12 |
Conread position: | 212-527 |
Cow position: | chr23:7063752-7063442 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 221 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 99, 42 |
Conread position: | 212-543 |
Cow position: | chr23:40862094-40862435 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 234 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 119, 19 |
Conread position: | 212-566 |
Cow position: | chr23:16700284-16699929 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 234 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 103, 19 |
Conread position: | 212-582 |
Cow position: | chr23:7322042-7321680 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 12 |
Conread position: | 213-564 |
Cow position: | chr23:13359576-13359936 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 257 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 33, 11 |
Conread position: | 214-426 |
Cow position: | chr23:5706756-5706962 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 153 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 32, 20 |
Conread position: | 215-566 |
Cow position: | chr23:1398278-1397926 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 236 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 102, 9 |
Conread position: | 220-553 |
Cow position: | chr23:11068984-11069311 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 84 |
Conread position: | 221-449 |
Cow position: | chr23:35254475-35254245 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 62, 149 |
Conread position: | 224-505 |
Cow position: | chr23:615145-614850 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 216 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 227-554 |
Cow position: | chr23:30307677-30308008 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 239 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 93, 30 |
Conread position: | 231-524 |
Cow position: | chr23:2531567-2531277 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 192 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 206, 64 |
Conread position: | 244-479 |
Cow position: | chr23:18902265-18902026 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 160 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 87, 134 |
Conread position: | 244-578 |
Cow position: | chr23:21659723-21660070 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 228 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 60, 178 |
Conread position: | 253-553 |
Cow position: | chr23:20172999-20173282 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 220 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 78, 118 |
Conread position: | 254-539 |
Cow position: | chr23:1663484-1663763 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 206 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 169, 5 |
Conread position: | 260-557 |
Cow position: | chr23:35177120-35177422 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 199 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 54, 91 |
Conread position: | 261-484 |
Cow position: | chr23:30773877-30773656 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 11, 157 |
Conread position: | 267-484 |
Cow position: | chr23:15505725-15505932 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 167, 78 |
Conread position: | 274-564 |
Cow position: | chr23:40651646-40651362 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 192 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 48, 99 |
Conread position: | 275-542 |
Cow position: | chr23:27290965-27290693 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 181 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 56, 149 |
Conread position: | 277-550 |
Cow position: | chr23:18963911-18963652 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 196 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 139, 56 |
Conread position: | 283-556 |
Cow position: | chr23:1767650-1767931 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 185 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 292-582 |
Cow position: | chr23:7252902-7253196 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 210 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 39, 20 |
Conread position: | 296-553 |
Cow position: | chr23:10845058-10844796 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 35, 24 |
Conread position: | 333-575 |
Cow position: | chr23:30745708-30745447 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 349-514 |
Cow position: | chr23:13647521-13647352 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 27, 135 |
Conread position: | 380-582 |
Cow position: | chr23:8737916-8737698 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 164 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 428-582 |
Cow position: | chr23:5265538-5265380 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 116 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 126, 114 |
Show alignments to all cow chromosomes.