Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 99
               

               Conread position:
               2-580
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 113
               

               Conread position:
               21-557
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 37
               

               Conread position:
               22-539
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               343
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               104, 111
               

               Conread position:
               122-413
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               146-543
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               187, 7
               

               Conread position:
               156-448
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               42, 76
               

               Conread position:
               166-577
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               290
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               177-553
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               183-510
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               133, 15
               

               Conread position:
               187-534
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               188-553
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 8
               

               Conread position:
               188-566
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               188-578
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               189-573
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               189-582
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 7
               

               Conread position:
               190-543
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               141, 6
               

               Conread position:
               193-413
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               194-436
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               136, 30
               

               Conread position:
               195-404
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               195-423
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               139, 36
               

               Conread position:
               195-423
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               195-520
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               130, 36
               

               Conread position:
               195-556
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               195-558
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               195-562
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 29
               

               Conread position:
               195-566
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               120, 32
               

               Conread position:
               196-419
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               196-434
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               196-543
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               220, 28
               

               Conread position:
               196-564
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 192
               

               Conread position:
               197-558
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               134, 36
               

               Conread position:
               198-432
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               225, 33
               

               Conread position:
               198-557
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               74, 33
               

               Conread position:
               198-566
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               171, 26
               

               Conread position:
               201-533
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               201-564
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               203-426
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               203-429
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               203-504
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               203-533
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               25, 103
               

               Conread position:
               203-562
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               203-575
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               204-405
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               204-413
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               152, 20
               

               Conread position:
               204-433
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               204-559
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               204-566
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               209, 27
               

               Conread position:
               206-493
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               111, 25
               

               Conread position:
               207-401
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               124, 6
               

               Conread position:
               207-553
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               248
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               113, 24
               

               Conread position:
               209-564
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               122, 22
               

               Conread position:
               210-578
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               211-434
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               211-543
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               212-484
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 12
               

               Conread position:
               212-527
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               99, 42
               

               Conread position:
               212-543
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               119, 19
               

               Conread position:
               212-566
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               212-582
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               213-564
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               214-426
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               215-566
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               102, 9
               

               Conread position:
               220-553
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 84
               

               Conread position:
               221-449
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               62, 149
               

               Conread position:
               224-505
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               227-554
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               231-524
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               206, 64
               

               Conread position:
               244-479
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 134
               

               Conread position:
               244-578
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 178
               

               Conread position:
               253-553
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               254-539
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               169, 5
               

               Conread position:
               260-557
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               261-484
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 157
               

               Conread position:
               267-484
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               167, 78
               

               Conread position:
               274-564
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               48, 99
               

               Conread position:
               275-542
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               277-550
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               139, 56
               

               Conread position:
               283-556
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               292-582
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               296-553
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 24
               

               Conread position:
               333-575
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               349-514
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               380-582
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               428-582
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               126, 114
               
Show alignments to all cow chromosomes.