Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               146-547
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               173, 8
               

               Conread position:
               154-547
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               157-557
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               174-553
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               185-413
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               132, 12
               

               Conread position:
               187-490
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               188-413
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               6, 28
               

               Conread position:
               188-524
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               229, 51
               

               Conread position:
               188-551
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               128, 8
               

               Conread position:
               188-551
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               188-558
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 190
               

               Conread position:
               188-564
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 44
               

               Conread position:
               190-425
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               141, 6
               

               Conread position:
               190-438
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               136, 7
               

               Conread position:
               190-539
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               39, 6
               

               Conread position:
               190-555
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               190-566
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               162, 7
               

               Conread position:
               190-566
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               125, 6
               

               Conread position:
               193-564
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 53
               

               Conread position:
               195-404
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               157, 34
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               154, 114
               

               Conread position:
               195-423
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               195-424
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               195-429
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               136, 29
               

               Conread position:
               195-480
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               195-485
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               234, 29
               

               Conread position:
               195-487
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               195-544
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               195-548
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               131, 29
               

               Conread position:
               195-557
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               195-563
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               157, 36
               

               Conread position:
               195-582
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               276
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               196-440
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               196-534
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               8, 112
               

               Conread position:
               196-561
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               197-451
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               198-413
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               198-434
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               218, 26
               

               Conread position:
               203-414
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               124, 28
               

               Conread position:
               203-422
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               203-521
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               203-551
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               212, 21
               

               Conread position:
               204-423
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               204-426
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               204-437
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               204-539
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               159, 19
               

               Conread position:
               204-554
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               207-406
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               124, 13
               

               Conread position:
               207-448
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               207-510
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               98, 148
               

               Conread position:
               207-520
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               123, 24
               

               Conread position:
               207-562
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               207-578
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               208-413
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               121, 16
               

               Conread position:
               208-429
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               208-566
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               209-486
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 108
               

               Conread position:
               209-537
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               122, 22
               

               Conread position:
               210-520
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               214-467
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               214-508
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               202, 10
               

               Conread position:
               223-413
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               223-520
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               228-564
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               92, 115
               

               Conread position:
               231-465
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               91, 71
               

               Conread position:
               235-539
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               81, 226
               

               Conread position:
               237-431
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               94, 137
               

               Conread position:
               244-557
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               53, 222
               

               Conread position:
               245-539
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               245-543
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               246-553
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               170, 94
               

               Conread position:
               253-582
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               266-553
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 145
               

               Conread position:
               273-562
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               279-571
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 187
               

               Conread position:
               293-566
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 82
               

               Conread position:
               330-575
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               332-557
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               102, 196
               

               Conread position:
               332-582
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               333-582
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               338-541
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               338-582
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               351-582
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               369-580
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               385-541
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 117
               
Show alignments to all cow chromosomes.