Cow genome map
Conread name: | rgul0117_o20.y1 |
Conread position: | 1-566 |
Cow position: | chr25:28188404-28187837 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 133 |
Conread position: | 6-490 |
Cow position: | chr25:12757012-12756531 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 325, 113 |
Conread position: | 60-413 |
Cow position: | chr25:4002413-4002752 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 253 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 271, 63 |
Conread position: | 154-582 |
Cow position: | chr25:18206606-18206174 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 30 |
Conread position: | 175-413 |
Cow position: | chr25:12824302-12824068 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 169 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 21, 60 |
Conread position: | 178-426 |
Cow position: | chr25:12261176-12260930 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 174 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 148, 18 |
Conread position: | 189-552 |
Cow position: | chr25:23355619-23356007 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 277 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 40, 258 |
Conread position: | 190-413 |
Cow position: | chr25:26654637-26654861 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 99, 6 |
Conread position: | 195-402 |
Cow position: | chr25:17702229-17702030 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 146 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 195-411 |
Cow position: | chr25:23389543-23389330 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 155 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 125, 29 |
Conread position: | 195-413 |
Cow position: | chr25:27504451-27504226 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 154 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 195-429 |
Cow position: | chr25:8347243-8347476 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 168 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 121, 36 |
Conread position: | 195-434 |
Cow position: | chr25:10330660-10330439 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 167 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 195-441 |
Cow position: | chr25:25051650-25051400 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 176 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 130, 39 |
Conread position: | 195-446 |
Cow position: | chr25:6886243-6885988 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 180 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 131, 36 |
Conread position: | 195-552 |
Cow position: | chr25:2126203-2126555 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 255 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 136, 36 |
Conread position: | 195-553 |
Cow position: | chr25:16430290-16429952 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 240 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 299, 28 |
Conread position: | 195-564 |
Cow position: | chr25:40957252-40956882 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 253 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 120, 34 |
Conread position: | 195-582 |
Cow position: | chr25:25866664-25867028 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 271 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 287, 39 |
Conread position: | 196-543 |
Cow position: | chr25:33691289-33691643 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 238 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 135, 28 |
Conread position: | 196-558 |
Cow position: | chr25:36081608-36081975 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 241 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 8, 15 |
Conread position: | 197-520 |
Cow position: | chr25:38425100-38425423 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 209 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 120, 107 |
Conread position: | 197-563 |
Cow position: | chr25:8512355-8511989 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 256 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 134, 38 |
Conread position: | 198-551 |
Cow position: | chr25:26757176-26757540 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 249 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 163, 33 |
Conread position: | 200-570 |
Cow position: | chr25:34236826-34236460 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 263 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 83, 24 |
Conread position: | 202-413 |
Cow position: | chr25:9957291-9957088 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 147 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 150, 29 |
Conread position: | 203-550 |
Cow position: | chr25:19633875-19633542 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 254 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 124, 27 |
Conread position: | 203-564 |
Cow position: | chr25:20076236-20076603 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 250 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 54, 21 |
Conread position: | 205-578 |
Cow position: | chr25:17659973-17660382 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 282 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 58, 19 |
Conread position: | 207-460 |
Cow position: | chr25:5837220-5836968 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 171 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 124, 24 |
Conread position: | 207-562 |
Cow position: | chr25:10748756-10748398 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 246 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 123, 24 |
Conread position: | 207-566 |
Cow position: | chr25:1837986-1838349 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 241 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 141, 24 |
Conread position: | 208-411 |
Cow position: | chr25:10366005-10365803 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 119, 23 |
Conread position: | 208-557 |
Cow position: | chr25:18265911-18266263 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 237 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 117, 16 |
Conread position: | 208-566 |
Cow position: | chr25:26087262-26087629 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 254 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 123, 23 |
Conread position: | 208-568 |
Cow position: | chr25:14467335-14466984 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 252 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 123, 19 |
Conread position: | 209-506 |
Cow position: | chr25:33260488-33260780 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 204 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 122, 11 |
Conread position: | 209-553 |
Cow position: | chr25:38357852-38358188 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 235 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 102, 22 |
Conread position: | 211-539 |
Cow position: | chr25:23672135-23671818 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 220 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 105, 35 |
Conread position: | 211-539 |
Cow position: | chr25:23739509-23739192 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 222 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 105, 35 |
Conread position: | 213-535 |
Cow position: | chr25:22735875-22736192 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 217 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 16, 83 |
Conread position: | 215-434 |
Cow position: | chr25:20394957-20395165 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 200, 16 |
Conread position: | 215-582 |
Cow position: | chr25:30035302-30035679 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 16 |
Conread position: | 216-512 |
Cow position: | chr25:22575767-22575470 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 199 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 60, 48 |
Conread position: | 223-404 |
Cow position: | chr25:8560630-8560806 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 139 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 108, 40 |
Conread position: | 223-571 |
Cow position: | chr25:8576454-8576807 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 241 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 105, 79 |
Conread position: | 231-432 |
Cow position: | chr25:20785815-20785614 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 103, 71 |
Conread position: | 232-423 |
Cow position: | chr25:36033206-36033399 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 140 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 98, 144 |
Conread position: | 235-554 |
Cow position: | chr25:28012847-28012555 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 221 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 245-499 |
Cow position: | chr25:12239365-12239106 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 182 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 86, 57 |
Conread position: | 266-574 |
Cow position: | chr25:13122975-13123274 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 206 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 61, 49 |
Conread position: | 272-521 |
Cow position: | chr25:33786276-33786024 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 182 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 31, 62 |
Conread position: | 284-552 |
Cow position: | chr25:13472072-13471808 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 206 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 47, 91 |
Conread position: | 309-582 |
Cow position: | chr25:10013573-10013303 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 190 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 246, 24 |
Conread position: | 328-553 |
Cow position: | chr25:34639497-34639268 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 166 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 45, 134 |
Conread position: | 330-564 |
Cow position: | chr25:36501369-36501135 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 158 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 86 |
Conread position: | 338-561 |
Cow position: | chr25:12932507-12932728 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 152 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 76, 106 |
Conread position: | 346-564 |
Cow position: | chr25:26240423-26240644 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 68, 19 |
Conread position: | 359-553 |
Cow position: | chr25:12833070-12832872 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 144 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 14, 53 |
Show alignments to all cow chromosomes.