Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 1-566
Cow position: chr25:28188404-28187837 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 133

Conread position: 6-490
Cow position: chr25:12757012-12756531 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 113

Conread position: 60-413
Cow position: chr25:4002413-4002752 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 271, 63

Conread position: 154-582
Cow position: chr25:18206606-18206174 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 175-413
Cow position: chr25:12824302-12824068 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 60

Conread position: 178-426
Cow position: chr25:12261176-12260930 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 18

Conread position: 189-552
Cow position: chr25:23355619-23356007 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 258

Conread position: 190-413
Cow position: chr25:26654637-26654861 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 6

Conread position: 195-402
Cow position: chr25:17702229-17702030 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 195-411
Cow position: chr25:23389543-23389330 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 125, 29

Conread position: 195-413
Cow position: chr25:27504451-27504226 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 195-429
Cow position: chr25:8347243-8347476 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 121, 36

Conread position: 195-434
Cow position: chr25:10330660-10330439 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 195-441
Cow position: chr25:25051650-25051400 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 130, 39

Conread position: 195-446
Cow position: chr25:6886243-6885988 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 131, 36

Conread position: 195-552
Cow position: chr25:2126203-2126555 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 136, 36

Conread position: 195-553
Cow position: chr25:16430290-16429952 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 299, 28

Conread position: 195-564
Cow position: chr25:40957252-40956882 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 120, 34

Conread position: 195-582
Cow position: chr25:25866664-25867028 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 271
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 287, 39

Conread position: 196-543
Cow position: chr25:33691289-33691643 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 135, 28

Conread position: 196-558
Cow position: chr25:36081608-36081975 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 15

Conread position: 197-520
Cow position: chr25:38425100-38425423 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 209
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 107

Conread position: 197-563
Cow position: chr25:8512355-8511989 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 134, 38

Conread position: 198-551
Cow position: chr25:26757176-26757540 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 163, 33

Conread position: 200-570
Cow position: chr25:34236826-34236460 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 83, 24

Conread position: 202-413
Cow position: chr25:9957291-9957088 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 150, 29

Conread position: 203-550
Cow position: chr25:19633875-19633542 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 124, 27

Conread position: 203-564
Cow position: chr25:20076236-20076603 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 21

Conread position: 205-578
Cow position: chr25:17659973-17660382 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 19

Conread position: 207-460
Cow position: chr25:5837220-5836968 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 124, 24

Conread position: 207-562
Cow position: chr25:10748756-10748398 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 24

Conread position: 207-566
Cow position: chr25:1837986-1838349 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 141, 24

Conread position: 208-411
Cow position: chr25:10366005-10365803 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 119, 23

Conread position: 208-557
Cow position: chr25:18265911-18266263 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 16

Conread position: 208-566
Cow position: chr25:26087262-26087629 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 123, 23

Conread position: 208-568
Cow position: chr25:14467335-14466984 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 123, 19

Conread position: 209-506
Cow position: chr25:33260488-33260780 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 11

Conread position: 209-553
Cow position: chr25:38357852-38358188 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 102, 22

Conread position: 211-539
Cow position: chr25:23672135-23671818 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 105, 35

Conread position: 211-539
Cow position: chr25:23739509-23739192 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 35

Conread position: 213-535
Cow position: chr25:22735875-22736192 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 83

Conread position: 215-434
Cow position: chr25:20394957-20395165 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 200, 16

Conread position: 215-582
Cow position: chr25:30035302-30035679 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 16

Conread position: 216-512
Cow position: chr25:22575767-22575470 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 48

Conread position: 223-404
Cow position: chr25:8560630-8560806 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 108, 40

Conread position: 223-571
Cow position: chr25:8576454-8576807 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 79

Conread position: 231-432
Cow position: chr25:20785815-20785614 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 71

Conread position: 232-423
Cow position: chr25:36033206-36033399 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 144

Conread position: 235-554
Cow position: chr25:28012847-28012555 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 245-499
Cow position: chr25:12239365-12239106 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 57

Conread position: 266-574
Cow position: chr25:13122975-13123274 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 49

Conread position: 272-521
Cow position: chr25:33786276-33786024 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 62

Conread position: 284-552
Cow position: chr25:13472072-13471808 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 91

Conread position: 309-582
Cow position: chr25:10013573-10013303 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 246, 24

Conread position: 328-553
Cow position: chr25:34639497-34639268 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 134

Conread position: 330-564
Cow position: chr25:36501369-36501135 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 86

Conread position: 338-561
Cow position: chr25:12932507-12932728 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 106

Conread position: 346-564
Cow position: chr25:26240423-26240644 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 19

Conread position: 359-553
Cow position: chr25:12833070-12832872 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 14, 53

Show alignments to all cow chromosomes.