Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-566
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 133
               

               Conread position:
               6-490
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 113
               

               Conread position:
               60-413
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               271, 63
               

               Conread position:
               154-582
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               175-413
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               178-426
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               148, 18
               

               Conread position:
               189-552
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 258
               

               Conread position:
               190-413
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               99, 6
               

               Conread position:
               195-402
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               195-411
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               125, 29
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               195-429
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               121, 36
               

               Conread position:
               195-434
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               195-441
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               130, 39
               

               Conread position:
               195-446
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               131, 36
               

               Conread position:
               195-552
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               195-553
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               299, 28
               

               Conread position:
               195-564
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               120, 34
               

               Conread position:
               195-582
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               287, 39
               

               Conread position:
               196-543
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               196-558
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               197-520
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               120, 107
               

               Conread position:
               197-563
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               134, 38
               

               Conread position:
               198-551
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               163, 33
               

               Conread position:
               200-570
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               202-413
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               150, 29
               

               Conread position:
               203-550
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               124, 27
               

               Conread position:
               203-564
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               205-578
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               207-460
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               207-562
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               123, 24
               

               Conread position:
               207-566
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               208-411
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               119, 23
               

               Conread position:
               208-557
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               117, 16
               

               Conread position:
               208-566
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               123, 23
               

               Conread position:
               208-568
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               123, 19
               

               Conread position:
               209-506
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               122, 11
               

               Conread position:
               209-553
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               211-539
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 35
               

               Conread position:
               211-539
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               105, 35
               

               Conread position:
               213-535
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               215-434
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               200, 16
               

               Conread position:
               215-582
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 16
               

               Conread position:
               216-512
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               223-404
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               223-571
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               105, 79
               

               Conread position:
               231-432
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               232-423
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               98, 144
               

               Conread position:
               235-554
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               245-499
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               86, 57
               

               Conread position:
               266-574
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               272-521
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               284-552
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               309-582
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               246, 24
               

               Conread position:
               328-553
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               330-564
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               338-561
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 106
               

               Conread position:
               346-564
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               359-553
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 53
               
Show alignments to all cow chromosomes.