Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 6
               

               Conread position:
               22-547
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               342
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               310, 75
               

               Conread position:
               30-460
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 20
               

               Conread position:
               32-558
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               157-562
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 81
               

               Conread position:
               158-547
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               174-566
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               177-412
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               154, 54
               

               Conread position:
               181-453
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               186-413
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               188-407
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               8, 120
               

               Conread position:
               188-533
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 36
               

               Conread position:
               188-582
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 43
               

               Conread position:
               189-429
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               163, 42
               

               Conread position:
               189-564
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               98, 7
               

               Conread position:
               190-413
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               125, 7
               

               Conread position:
               190-441
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               190-582
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 6
               

               Conread position:
               191-514
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               195-405
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               171, 29
               

               Conread position:
               195-423
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               123, 29
               

               Conread position:
               195-425
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               195-445
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               160, 36
               

               Conread position:
               195-489
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               125, 29
               

               Conread position:
               195-540
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               132, 45
               

               Conread position:
               195-566
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               157, 36
               

               Conread position:
               196-562
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 251
               

               Conread position:
               197-423
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               200-554
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               134, 24
               

               Conread position:
               202-519
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               220, 22
               

               Conread position:
               203-543
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               122, 217
               

               Conread position:
               203-552
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               203-557
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               211, 28
               

               Conread position:
               203-564
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               128, 43
               

               Conread position:
               203-577
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               338, 28
               

               Conread position:
               204-404
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               127, 27
               

               Conread position:
               204-547
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               121, 27
               

               Conread position:
               204-564
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               205-414
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               125, 35
               

               Conread position:
               205-553
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 26
               

               Conread position:
               207-444
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               207-566
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               212-404
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               119, 12
               

               Conread position:
               212-571
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               137, 12
               

               Conread position:
               213-543
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 11
               

               Conread position:
               215-520
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               219-452
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               224-413
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 73
               

               Conread position:
               225-547
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               249-562
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               259-538
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               267-557
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               269-553
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               269-561
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               166, 62
               

               Conread position:
               277-578
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               54, 77
               
Show alignments to all cow chromosomes.