Cow genome map
| Conread name: | rgul0117_o20.y1 |
| Conread position: | 1-548 |
| Cow position: | chr26:22622538-22623098 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 6 |
| Conread position: | 22-547 |
| Cow position: | chr26:2610204-2609698 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 342 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 310, 75 |
| Conread position: | 30-460 |
| Cow position: | chr26:17676136-17675719 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 32-558 |
| Cow position: | chr26:8810724-8811246 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 157-562 |
| Cow position: | chr26:3019715-3019296 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 158-547 |
| Cow position: | chr26:12668918-12669307 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 174-566 |
| Cow position: | chr26:9104549-9104154 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 177-412 |
| Cow position: | chr26:5685181-5685418 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 154, 54 |
| Conread position: | 181-453 |
| Cow position: | chr26:10491521-10491793 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 186-413 |
| Cow position: | chr26:7961382-7961602 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 188-407 |
| Cow position: | chr26:3186346-3186568 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 120 |
| Conread position: | 188-533 |
| Cow position: | chr26:14359368-14359027 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 188-582 |
| Cow position: | chr26:30603374-30602958 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 43 |
| Conread position: | 189-429 |
| Cow position: | chr26:20260337-20260566 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 163, 42 |
| Conread position: | 189-564 |
| Cow position: | chr26:16604033-16604411 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 98, 7 |
| Conread position: | 190-413 |
| Cow position: | chr26:25737220-25737444 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 190-441 |
| Cow position: | chr26:3921998-3921756 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 190-582 |
| Cow position: | chr26:2603848-2603472 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 191-514 |
| Cow position: | chr26:15938402-15938721 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 41 |
| Conread position: | 195-405 |
| Cow position: | chr26:12661762-12661553 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 171, 29 |
| Conread position: | 195-423 |
| Cow position: | chr26:8897137-8896905 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 123, 29 |
| Conread position: | 195-425 |
| Cow position: | chr26:27594396-27594614 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 147, 29 |
| Conread position: | 195-445 |
| Cow position: | chr26:4664676-4664432 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 195-489 |
| Cow position: | chr26:2389298-2389003 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 195-540 |
| Cow position: | chr26:33112631-33112287 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 132, 45 |
| Conread position: | 195-566 |
| Cow position: | chr26:26294435-26294069 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 157, 36 |
| Conread position: | 196-562 |
| Cow position: | chr26:29353758-29353390 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 251 |
| Conread position: | 197-423 |
| Cow position: | chr26:1329300-1329524 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 200-554 |
| Cow position: | chr26:33227564-33227906 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 202-519 |
| Cow position: | chr26:6079126-6078814 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 220, 22 |
| Conread position: | 203-543 |
| Cow position: | chr26:7103276-7102942 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 122, 217 |
| Conread position: | 203-552 |
| Cow position: | chr26:6827927-6828277 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 28 |
| Conread position: | 203-557 |
| Cow position: | chr26:9666646-9666297 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 211, 28 |
| Conread position: | 203-564 |
| Cow position: | chr26:21859585-21859949 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 203-577 |
| Cow position: | chr26:21013134-21013486 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 338, 28 |
| Conread position: | 204-404 |
| Cow position: | chr26:19769323-19769123 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 127, 27 |
| Conread position: | 204-547 |
| Cow position: | chr26:9064109-9064449 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 204-564 |
| Cow position: | chr26:8700288-8699922 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 27 |
| Conread position: | 205-414 |
| Cow position: | chr26:27491740-27491530 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 125, 35 |
| Conread position: | 205-553 |
| Cow position: | chr26:34031864-34032208 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 26 |
| Conread position: | 207-444 |
| Cow position: | chr26:8277807-8277565 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 207-566 |
| Cow position: | chr26:798533-798169 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 212-404 |
| Cow position: | chr26:8504028-8504224 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 212-571 |
| Cow position: | chr26:21242874-21243227 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 137, 12 |
| Conread position: | 213-543 |
| Cow position: | chr26:17204367-17204041 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 215-520 |
| Cow position: | chr26:13979359-13979045 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 219-452 |
| Cow position: | chr26:5552785-5553012 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 224-413 |
| Cow position: | chr26:17288987-17289176 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 73 |
| Conread position: | 225-547 |
| Cow position: | chr26:783152-782823 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 98, 59 |
| Conread position: | 249-562 |
| Cow position: | chr26:19110708-19111035 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 78, 55 |
| Conread position: | 259-538 |
| Cow position: | chr26:16510599-16510889 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 267-557 |
| Cow position: | chr26:30605539-30605249 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 269-553 |
| Cow position: | chr26:28421927-28421648 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 269-561 |
| Cow position: | chr26:10292423-10292722 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 166, 62 |
| Conread position: | 277-578 |
| Cow position: | chr26:15632324-15632630 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 54, 77 |
Show alignments to all cow chromosomes.