Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-432
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 132
               

               Conread position:
               79-413
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               47, 124
               

               Conread position:
               85-553
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               148-553
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 9
               

               Conread position:
               152-413
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               175, 14
               

               Conread position:
               158-573
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               287
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               177-564
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               10, 46
               

               Conread position:
               185-405
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 47
               

               Conread position:
               186-547
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 122
               

               Conread position:
               187-413
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               129, 10
               

               Conread position:
               188-413
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               116, 8
               

               Conread position:
               188-573
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               189-442
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               190-413
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               164, 6
               

               Conread position:
               190-564
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               6, 35
               

               Conread position:
               191-404
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               191-561
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               140, 36
               

               Conread position:
               192-566
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               193-404
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               150, 27
               

               Conread position:
               194-511
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               195-429
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               195-429
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               195-432
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               121, 29
               

               Conread position:
               195-450
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               165, 36
               

               Conread position:
               195-535
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               155, 36
               

               Conread position:
               195-547
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               195-563
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               154, 29
               

               Conread position:
               195-564
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               195-564
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 18
               

               Conread position:
               195-582
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 27
               

               Conread position:
               196-425
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               210, 35
               

               Conread position:
               196-469
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               198-415
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               198-429
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               133, 33
               

               Conread position:
               198-520
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               133, 33
               

               Conread position:
               199-426
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               200-564
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               201-566
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               202-560
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               106, 27
               

               Conread position:
               203-429
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               203-460
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               203-510
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 28
               

               Conread position:
               203-539
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               203-557
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               94, 26
               

               Conread position:
               203-562
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               203-563
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               203-582
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               204-483
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               204-539
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               206-582
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               207-413
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               207-434
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               207-534
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               207-553
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               124, 17
               

               Conread position:
               207-578
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 17
               

               Conread position:
               208-557
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               157, 23
               

               Conread position:
               208-566
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               209-558
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               212-430
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               119, 19
               

               Conread position:
               212-581
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               220, 19
               

               Conread position:
               221-433
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 10
               

               Conread position:
               221-582
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 13
               

               Conread position:
               223-562
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               258, 79
               

               Conread position:
               224-516
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               195, 78
               

               Conread position:
               225-423
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               225-449
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               124, 90
               

               Conread position:
               226-562
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               171, 84
               

               Conread position:
               231-540
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               100, 62
               

               Conread position:
               232-558
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               184, 101
               

               Conread position:
               244-423
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               244-566
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               246-550
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               170, 49
               

               Conread position:
               249-548
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               253-541
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 101
               

               Conread position:
               260-582
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               261-582
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               291-553
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 80
               

               Conread position:
               303-550
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               330-578
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               331-557
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 18
               

               Conread position:
               341-553
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               84, 8
               

               Conread position:
               358-553
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.