Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-582
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 62
               

               Conread position:
               2-493
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 17
               

               Conread position:
               3-539
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               11-551
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 25
               

               Conread position:
               30-561
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               343
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               142, 30
               

               Conread position:
               39-450
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               87, 94
               

               Conread position:
               50-553
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 79
               

               Conread position:
               147-574
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               169-414
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               172-564
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               159, 19
               

               Conread position:
               177-423
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               154, 13
               

               Conread position:
               180-461
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               185-433
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               11, 127
               

               Conread position:
               185-503
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               186-426
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               186-539
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               238, 10
               

               Conread position:
               187-539
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               37, 32
               

               Conread position:
               188-459
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               205, 10
               

               Conread position:
               188-566
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               188-571
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               188-582
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               190-425
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               128, 6
               

               Conread position:
               194-440
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               222, 37
               

               Conread position:
               194-549
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               238, 37
               

               Conread position:
               195-408
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               195-410
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               136, 29
               

               Conread position:
               195-418
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               195-419
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               144, 36
               

               Conread position:
               195-434
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               220, 108
               

               Conread position:
               195-532
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 29
               

               Conread position:
               195-566
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               195-571
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               136, 29
               

               Conread position:
               195-582
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               222, 120
               

               Conread position:
               196-490
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               143, 28
               

               Conread position:
               196-533
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               201, 28
               

               Conread position:
               196-582
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 35
               

               Conread position:
               197-432
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               120, 27
               

               Conread position:
               197-557
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               199-564
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               132, 11
               

               Conread position:
               202-562
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               129, 7
               

               Conread position:
               203-404
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               74, 28
               

               Conread position:
               203-485
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               203-525
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               131, 28
               

               Conread position:
               203-539
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               216, 28
               

               Conread position:
               203-553
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               213, 21
               

               Conread position:
               203-555
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               114, 21
               

               Conread position:
               203-558
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               215, 28
               

               Conread position:
               203-578
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               204-405
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               204-439
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               114, 20
               

               Conread position:
               204-440
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               204-510
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               205-564
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               205-582
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 19
               

               Conread position:
               207-553
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               212, 17
               

               Conread position:
               209-538
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               114, 22
               

               Conread position:
               211-582
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               212-549
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               194, 90
               

               Conread position:
               212-564
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               215-418
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               215-424
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 158
               

               Conread position:
               217-519
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               114, 13
               

               Conread position:
               222-449
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               223-534
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               223-554
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               176, 83
               

               Conread position:
               223-582
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               109, 69
               

               Conread position:
               224-437
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               103, 154
               

               Conread position:
               224-448
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               224-543
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               25, 154
               

               Conread position:
               224-562
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               224-582
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               225-538
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               227-553
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 68
               

               Conread position:
               230-553
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               231-542
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               89, 142
               

               Conread position:
               237-582
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               124, 73
               

               Conread position:
               245-578
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               249-557
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 169
               

               Conread position:
               252-547
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               272-434
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               278-557
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 262
               

               Conread position:
               284-553
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               308-571
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               330-531
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               330-553
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               353-535
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               353-582
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 182
               

               Conread position:
               361-582
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               65, 12
               
Show alignments to all cow chromosomes.