Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 1-562
Cow position:
Alignm length: 567
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 1-566
Cow position:
Alignm length: 581
Alignm identity: 372
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 128

Conread position: 2-582
Cow position:
Alignm length: 596
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 154

Conread position: 45-401
Cow position:
Alignm length: 362
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 112

Conread position: 51-552
Cow position:
Alignm length: 520
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 79

Conread position: 58-533
Cow position:
Alignm length: 491
Alignm identity: 322
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 68, 52

Conread position: 59-469
Cow position:
Alignm length: 428
Alignm identity: 295
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 217, 66

Conread position: 156-413
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 62

Conread position: 174-538
Cow position:
Alignm length: 373
Alignm identity: 255
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 10

Conread position: 177-487
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 143, 54

Conread position: 181-553
Cow position:
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 171

Conread position: 184-448
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 143, 12

Conread position: 184-516
Cow position:
Alignm length: 340
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 143, 34

Conread position: 184-582
Cow position:
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 192

Conread position: 186-413
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 53

Conread position: 186-535
Cow position:
Alignm length: 354
Alignm identity: 230
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 119, 11

Conread position: 188-426
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 139, 9

Conread position: 188-429
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 188-430
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 33

Conread position: 188-441
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 8, 16

Conread position: 188-484
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 143, 8

Conread position: 188-489
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 44

Conread position: 188-520
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 44

Conread position: 188-553
Cow position:
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 43

Conread position: 188-564
Cow position:
Alignm length: 401
Alignm identity: 280
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 46, 8

Conread position: 188-567
Cow position:
Alignm length: 387
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 189-539
Cow position:
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 35

Conread position: 189-553
Cow position:
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 42

Conread position: 190-413
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 26

Conread position: 191-433
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 6, 34

Conread position: 191-553
Cow position:
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 301

Conread position: 194-431
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 37

Conread position: 194-539
Cow position:
Alignm length: 372
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 37

Conread position: 195-413
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 195-413
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 29

Conread position: 195-414
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 111, 116

Conread position: 195-414
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 36

Conread position: 195-424
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 123, 36

Conread position: 195-426
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 101

Conread position: 195-433
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 136, 49

Conread position: 195-433
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 136, 29

Conread position: 195-434
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 31

Conread position: 195-437
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 123, 36

Conread position: 195-438
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 136, 29

Conread position: 195-469
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 36

Conread position: 195-488
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 211, 69

Conread position: 195-514
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 144

Conread position: 195-539
Cow position:
Alignm length: 350
Alignm identity: 244
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 136, 22

Conread position: 195-540
Cow position:
Alignm length: 355
Alignm identity: 231
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 121, 36

Conread position: 195-544
Cow position:
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 29

Conread position: 195-553
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 131, 36

Conread position: 195-557
Cow position:
Alignm length: 368
Alignm identity: 245
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 165, 25

Conread position: 195-558
Cow position:
Alignm length: 376
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 36

Conread position: 195-564
Cow position:
Alignm length: 380
Alignm identity: 252
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 120, 24

Conread position: 195-566
Cow position:
Alignm length: 392
Alignm identity: 256
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 111, 36

Conread position: 195-568
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 36

Conread position: 196-413
Cow position:
Alignm length: 223
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 35

Conread position: 196-413
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 48

Conread position: 196-434
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 68, 21

Conread position: 196-534
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 133

Conread position: 196-564
Cow position:
Alignm length: 384
Alignm identity: 251
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 27

Conread position: 196-564
Cow position:
Alignm length: 377
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 92, 35

Conread position: 196-582
Cow position:
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 23

Conread position: 197-434
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 109, 32

Conread position: 197-503
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 5

Conread position: 198-582
Cow position:
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 33

Conread position: 203-412
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 203-413
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 23

Conread position: 203-413
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 30

Conread position: 203-413
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 117, 21

Conread position: 203-543
Cow position:
Alignm length: 342
Alignm identity: 236
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 214, 36

Conread position: 203-566
Cow position:
Alignm length: 367
Alignm identity: 234
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 230, 30

Conread position: 204-413
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 27

Conread position: 204-414
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 204-414
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 27

Conread position: 204-494
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 113, 25

Conread position: 204-533
Cow position:
Alignm length: 337
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 20

Conread position: 204-562
Cow position:
Alignm length: 364
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 27

Conread position: 207-429
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 159, 24

Conread position: 207-511
Cow position:
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 17

Conread position: 207-562
Cow position:
Alignm length: 367
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 239

Conread position: 207-562
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 199, 16

Conread position: 207-582
Cow position:
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 23

Conread position: 208-432
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 81

Conread position: 208-531
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 122, 23

Conread position: 208-534
Cow position:
Alignm length: 337
Alignm identity: 230
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 123, 16

Conread position: 208-543
Cow position:
Alignm length: 347
Alignm identity: 242
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 154, 23

Conread position: 209-557
Cow position:
Alignm length: 352
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 22

Conread position: 209-578
Cow position:
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 22

Conread position: 209-578
Cow position:
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 211-578
Cow position:
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 20

Conread position: 212-566
Cow position:
Alignm length: 362
Alignm identity: 232
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 119, 19

Conread position: 214-555
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 138

Conread position: 217-388
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 114, 87

Conread position: 220-413
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 13

Conread position: 220-539
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 111, 11

Conread position: 221-402
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 110, 32

Conread position: 222-541
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 9

Conread position: 223-414
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 21

Conread position: 224-530
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 147

Conread position: 226-566
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 189, 86

Conread position: 226-582
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 227-452
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 104, 151

Conread position: 230-564
Cow position:
Alignm length: 344
Alignm identity: 234
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 104, 186

Conread position: 231-489
Cow position:
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 166

Conread position: 231-564
Cow position:
Alignm length: 342
Alignm identity: 236
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 95, 103

Conread position: 231-571
Cow position:
Alignm length: 352
Alignm identity: 228
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 43

Conread position: 236-554
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 169, 112

Conread position: 237-534
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 125

Conread position: 238-558
Cow position:
Alignm length: 330
Alignm identity: 216
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 142

Conread position: 244-429
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 49

Conread position: 244-433
Cow position:
Alignm length: 190
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 244-553
Cow position:
Alignm length: 319
Alignm identity: 218
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 58

Conread position: 247-557
Cow position:
Alignm length: 319
Alignm identity: 205
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 45

Conread position: 250-566
Cow position:
Alignm length: 324
Alignm identity: 208
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 9

Conread position: 252-391
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 79, 52

Conread position: 252-564
Cow position:
Alignm length: 321
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 74

Conread position: 253-543
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 62, 105

Conread position: 254-580
Cow position:
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 56

Conread position: 256-578
Cow position:
Alignm length: 350
Alignm identity: 233
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 201

Conread position: 260-543
Cow position:
Alignm length: 291
Alignm identity: 189
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 35

Conread position: 265-489
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 106

Conread position: 269-486
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 11

Conread position: 269-553
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 127, 31

Conread position: 273-564
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 81

Conread position: 275-562
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 43

Conread position: 279-554
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 283-553
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 283-562
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 179

Conread position: 284-538
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 94

Conread position: 290-557
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 18

Conread position: 304-564
Cow position:
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 6

Conread position: 307-557
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 19

Conread position: 308-553
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 45

Conread position: 333-557
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 124

Conread position: 345-543
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 37

Conread position: 347-582
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 14

Conread position: 348-581
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 90, 41

Conread position: 354-519
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 362-582
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 129

Conread position: 373-561
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 192

Conread position: 385-553
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 91

Show alignments to all cow chromosomes.