Cow genome map
| Conread name: | rgul0117_o20.y1 |
| Conread position: | 2-542 |
| Cow position: | chr6:30473909-30474454 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 182 |
| Conread position: | 11-564 |
| Cow position: | chr6:56376751-56376201 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 11-582 |
| Cow position: | chr6:3374959-3374400 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 122 |
| Conread position: | 22-564 |
| Cow position: | chr6:48573284-48572732 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 25-564 |
| Cow position: | chr6:28080292-28079766 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 346 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 101, 65 |
| Conread position: | 31-431 |
| Cow position: | chr6:53651646-53652055 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 84-582 |
| Cow position: | chr6:4667121-4666624 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 291, 218 |
| Conread position: | 146-553 |
| Cow position: | chr6:11383245-11382833 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 150-558 |
| Cow position: | chr6:8788308-8787895 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 156-576 |
| Cow position: | chr6:16518125-16517721 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 174-567 |
| Cow position: | chr6:29084470-29084056 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 181-514 |
| Cow position: | chr6:32677307-32676984 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 141, 15 |
| Conread position: | 183-547 |
| Cow position: | chr6:36652185-36652553 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 185-543 |
| Cow position: | chr6:47327301-47326946 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 188-418 |
| Cow position: | chr6:23986964-23986750 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 6 |
| Conread position: | 188-454 |
| Cow position: | chr6:30285461-30285726 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 136, 8 |
| Conread position: | 188-514 |
| Cow position: | chr6:55140892-55140570 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 188-563 |
| Cow position: | chr6:2582645-2583005 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 8 |
| Conread position: | 188-566 |
| Cow position: | chr6:24004321-24004686 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 189-521 |
| Cow position: | chr6:7173997-7173644 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 189-531 |
| Cow position: | chr6:34549184-34549517 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 189-553 |
| Cow position: | chr6:30315286-30314913 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 7 |
| Conread position: | 189-566 |
| Cow position: | chr6:9008841-9008462 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 126, 42 |
| Conread position: | 190-413 |
| Cow position: | chr6:7824533-7824756 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 6, 34 |
| Conread position: | 190-413 |
| Cow position: | chr6:13741469-13741696 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 190-543 |
| Cow position: | chr6:31525821-31526173 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 225, 10 |
| Conread position: | 190-582 |
| Cow position: | chr6:10422946-10423338 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 6 |
| Conread position: | 191-401 |
| Cow position: | chr6:55366551-55366335 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 194-514 |
| Cow position: | chr6:49821300-49821617 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 149, 15 |
| Conread position: | 194-564 |
| Cow position: | chr6:57119153-57118794 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 195-400 |
| Cow position: | chr6:30128549-30128339 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 136, 36 |
| Conread position: | 195-402 |
| Cow position: | chr6:1783996-1783795 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 157, 36 |
| Conread position: | 195-411 |
| Cow position: | chr6:67544516-67544305 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 157, 29 |
| Conread position: | 195-413 |
| Cow position: | chr6:1891069-1890851 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 122, 34 |
| Conread position: | 195-413 |
| Cow position: | chr6:33852009-33851804 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 195-433 |
| Cow position: | chr6:23695774-23696007 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 195-442 |
| Cow position: | chr6:52478651-52478390 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 122, 29 |
| Conread position: | 195-449 |
| Cow position: | chr6:16737797-16738050 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 195-451 |
| Cow position: | chr6:31879596-31879352 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 127, 29 |
| Conread position: | 195-469 |
| Cow position: | chr6:47625183-47624908 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 125, 39 |
| Conread position: | 195-514 |
| Cow position: | chr6:52556698-52556382 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 195-532 |
| Cow position: | chr6:16700035-16700378 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 136, 24 |
| Conread position: | 195-558 |
| Cow position: | chr6:49398840-49398478 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 195-564 |
| Cow position: | chr6:48807223-48806861 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 195-566 |
| Cow position: | chr6:15242612-15242986 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 126, 16 |
| Conread position: | 195-578 |
| Cow position: | chr6:57685935-57686317 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 196-413 |
| Cow position: | chr6:56849795-56850005 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 196-419 |
| Cow position: | chr6:24468615-24468392 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 135, 65 |
| Conread position: | 196-437 |
| Cow position: | chr6:60152813-60153054 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 196-438 |
| Cow position: | chr6:8637052-8637297 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 196-538 |
| Cow position: | chr6:59277163-59276820 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 35 |
| Conread position: | 196-557 |
| Cow position: | chr6:55475027-55475396 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 135, 23 |
| Conread position: | 196-582 |
| Cow position: | chr6:24917930-24917553 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 196-582 |
| Cow position: | chr6:45617663-45617263 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 35 |
| Conread position: | 197-444 |
| Cow position: | chr6:4383271-4383508 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 134, 27 |
| Conread position: | 197-486 |
| Cow position: | chr6:58315827-58316119 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 105, 46 |
| Conread position: | 197-553 |
| Cow position: | chr6:41557252-41557605 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 6 |
| Conread position: | 197-566 |
| Cow position: | chr6:21534837-21535189 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 163, 34 |
| Conread position: | 198-426 |
| Cow position: | chr6:23248184-23247959 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 198-552 |
| Cow position: | chr6:55936197-55935841 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 199-567 |
| Cow position: | chr6:21110749-21111102 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 153, 105 |
| Conread position: | 200-457 |
| Cow position: | chr6:60166549-60166286 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 131, 24 |
| Conread position: | 200-519 |
| Cow position: | chr6:58594328-58594000 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 201-582 |
| Cow position: | chr6:63406460-63406843 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 283 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 202-562 |
| Cow position: | chr6:35703403-35703064 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 131, 29 |
| Conread position: | 203-406 |
| Cow position: | chr6:42839950-42840159 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 131, 26 |
| Conread position: | 203-413 |
| Cow position: | chr6:11789783-11789995 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 203-430 |
| Cow position: | chr6:48344112-48344342 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 128, 21 |
| Conread position: | 203-439 |
| Cow position: | chr6:899500-899273 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 203-480 |
| Cow position: | chr6:54807007-54807291 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 203-485 |
| Cow position: | chr6:22863616-22863348 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 203-486 |
| Cow position: | chr6:8318382-8318090 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 203-511 |
| Cow position: | chr6:33984749-33985073 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 203-521 |
| Cow position: | chr6:35415737-35415410 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 203-522 |
| Cow position: | chr6:47847917-47847601 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 212, 28 |
| Conread position: | 203-547 |
| Cow position: | chr6:47026266-47026608 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 203-550 |
| Cow position: | chr6:60931116-60930762 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 203-557 |
| Cow position: | chr6:45065222-45064876 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 203-558 |
| Cow position: | chr6:42565470-42565829 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 125, 28 |
| Conread position: | 203-561 |
| Cow position: | chr6:24223377-24223015 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 203-563 |
| Cow position: | chr6:9026301-9026666 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 128, 28 |
| Conread position: | 203-564 |
| Cow position: | chr6:1907323-1907667 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 128, 165 |
| Conread position: | 203-564 |
| Cow position: | chr6:4864750-4864399 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 222, 14 |
| Conread position: | 204-423 |
| Cow position: | chr6:15923212-15922996 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 111, 20 |
| Conread position: | 204-430 |
| Cow position: | chr6:1889296-1889080 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 204-451 |
| Cow position: | chr6:61130697-61130446 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 204-557 |
| Cow position: | chr6:35435788-35436135 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 148, 98 |
| Conread position: | 205-582 |
| Cow position: | chr6:9469439-9469807 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 205-582 |
| Cow position: | chr6:38899970-38899601 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 45 |
| Conread position: | 206-552 |
| Cow position: | chr6:51191602-51191970 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 206-582 |
| Cow position: | chr6:13592497-13592880 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 25 |
| Conread position: | 207-484 |
| Cow position: | chr6:39092303-39092564 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 207-490 |
| Cow position: | chr6:38614612-38614893 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 207-558 |
| Cow position: | chr6:67214530-67214891 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 207-566 |
| Cow position: | chr6:38440970-38441322 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 145, 24 |
| Conread position: | 207-566 |
| Cow position: | chr6:47339561-47339206 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 199, 105 |
| Conread position: | 207-571 |
| Cow position: | chr6:27710443-27710807 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 24 |
| Conread position: | 207-581 |
| Cow position: | chr6:12519306-12519664 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 208-557 |
| Cow position: | chr6:20172010-20172364 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 209-542 |
| Cow position: | chr6:6701478-6701151 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 142 |
| Conread position: | 209-554 |
| Cow position: | chr6:6596372-6596709 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 209-578 |
| Cow position: | chr6:44377056-44377433 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 211-413 |
| Cow position: | chr6:54864874-54864677 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 141, 13 |
| Conread position: | 212-411 |
| Cow position: | chr6:56902657-56902854 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 212-532 |
| Cow position: | chr6:6995154-6994832 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 212-562 |
| Cow position: | chr6:6367869-6367527 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 214-562 |
| Cow position: | chr6:15782730-15782370 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 117, 17 |
| Conread position: | 215-530 |
| Cow position: | chr6:27870565-27870893 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 216-488 |
| Cow position: | chr6:6721909-6722177 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 220-578 |
| Cow position: | chr6:62326945-62327306 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 99, 137 |
| Conread position: | 221-426 |
| Cow position: | chr6:415897-416105 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 223-532 |
| Cow position: | chr6:39916988-39917284 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 159, 43 |
| Conread position: | 224-521 |
| Cow position: | chr6:58750126-58749831 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 107, 64 |
| Conread position: | 224-546 |
| Cow position: | chr6:12652010-12652334 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 92, 300 |
| Conread position: | 224-553 |
| Cow position: | chr6:1914424-1914763 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 107, 27 |
| Conread position: | 224-564 |
| Cow position: | chr6:24545421-24545761 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 191, 94 |
| Conread position: | 224-578 |
| Cow position: | chr6:11160205-11159839 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 80 |
| Conread position: | 224-578 |
| Cow position: | chr6:32428052-32428400 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 193, 18 |
| Conread position: | 225-485 |
| Cow position: | chr6:10254045-10254310 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 106, 21 |
| Conread position: | 225-541 |
| Cow position: | chr6:6400753-6401076 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 148 |
| Conread position: | 225-557 |
| Cow position: | chr6:42566673-42566995 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 39 |
| Conread position: | 226-551 |
| Cow position: | chr6:57680629-57680303 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 173 |
| Conread position: | 226-557 |
| Cow position: | chr6:14658411-14658747 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 105, 124 |
| Conread position: | 231-562 |
| Cow position: | chr6:65871708-65872033 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 198, 102 |
| Conread position: | 233-553 |
| Cow position: | chr6:49734198-49734525 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 107, 273 |
| Conread position: | 234-494 |
| Cow position: | chr6:62754667-62754411 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 164, 68 |
| Conread position: | 244-556 |
| Cow position: | chr6:12964271-12964599 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 245-404 |
| Cow position: | chr6:65947263-65947099 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 134 |
| Conread position: | 250-555 |
| Cow position: | chr6:5114217-5113914 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 60 |
| Conread position: | 253-450 |
| Cow position: | chr6:37739019-37739218 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 95 |
| Conread position: | 253-491 |
| Cow position: | chr6:16252012-16252239 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 263-582 |
| Cow position: | chr6:50822077-50822400 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 97 |
| Conread position: | 265-582 |
| Cow position: | chr6:23891397-23891728 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 269-402 |
| Cow position: | chr6:64889086-64889224 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 269-582 |
| Cow position: | chr6:54032101-54032398 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 283, 27 |
| Conread position: | 271-557 |
| Cow position: | chr6:53673714-53674004 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 274-542 |
| Cow position: | chr6:42362442-42362706 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 145, 27 |
| Conread position: | 277-521 |
| Cow position: | chr6:55892619-55892873 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 147 |
| Conread position: | 282-531 |
| Cow position: | chr6:47616751-47616494 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 182 |
| Conread position: | 282-543 |
| Cow position: | chr6:35775122-35774857 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 282-557 |
| Cow position: | chr6:52602383-52602118 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 319-582 |
| Cow position: | chr6:7997921-7998186 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 100, 110 |
| Conread position: | 320-582 |
| Cow position: | chr6:31526911-31526645 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 330-552 |
| Cow position: | chr6:51486329-51486551 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 331-553 |
| Cow position: | chr6:20332571-20332347 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 341-553 |
| Cow position: | chr6:50501194-50501412 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 344-564 |
| Cow position: | chr6:20754369-20754154 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 352-552 |
| Cow position: | chr6:67821757-67821961 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 358-553 |
| Cow position: | chr6:18978306-18978494 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 361-582 |
| Cow position: | chr6:46529316-46529551 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 366-548 |
| Cow position: | chr6:57474615-57474793 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 424-553 |
| Cow position: | chr6:60693904-60693777 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.