Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 1-490
Cow position:
Alignm length: 508
Alignm identity: 338
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 127, 164

Conread position: 1-520
Cow position:
Alignm length: 533
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 156

Conread position: 1-557
Cow position:
Alignm length: 569
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 137

Conread position: 1-566
Cow position:
Alignm length: 578
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 132

Conread position: 2-557
Cow position:
Alignm length: 571
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 149

Conread position: 2-582
Cow position:
Alignm length: 593
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 15-405
Cow position:
Alignm length: 397
Alignm identity: 261
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 48

Conread position: 16-575
Cow position:
Alignm length: 569
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 49

Conread position: 21-413
Cow position:
Alignm length: 405
Alignm identity: 278
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 91, 20

Conread position: 21-413
Cow position:
Alignm length: 398
Alignm identity: 265
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 168

Conread position: 58-550
Cow position:
Alignm length: 504
Alignm identity: 334
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 137, 57

Conread position: 62-378
Cow position:
Alignm length: 324
Alignm identity: 206
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 161

Conread position: 139-559
Cow position:
Alignm length: 433
Alignm identity: 292
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 19

Conread position: 150-423
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 10, 37

Conread position: 166-483
Cow position:
Alignm length: 326
Alignm identity: 223
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 28, 38

Conread position: 174-553
Cow position:
Alignm length: 393
Alignm identity: 270
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 15, 61

Conread position: 174-571
Cow position:
Alignm length: 409
Alignm identity: 271
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 22

Conread position: 176-437
Cow position:
Alignm length: 269
Alignm identity: 186
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 7, 61

Conread position: 184-413
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 147, 12

Conread position: 188-520
Cow position:
Alignm length: 341
Alignm identity: 220
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 154, 8

Conread position: 188-553
Cow position:
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 188-553
Cow position:
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 8

Conread position: 188-557
Cow position:
Alignm length: 376
Alignm identity: 253
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 41

Conread position: 188-558
Cow position:
Alignm length: 371
Alignm identity: 241
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 188-566
Cow position:
Alignm length: 391
Alignm identity: 258
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 9, 44

Conread position: 189-571
Cow position:
Alignm length: 390
Alignm identity: 255
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 133, 7

Conread position: 189-582
Cow position:
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 7

Conread position: 190-414
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 34

Conread position: 190-446
Cow position:
Alignm length: 260
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 42

Conread position: 190-557
Cow position:
Alignm length: 377
Alignm identity: 254
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 6

Conread position: 190-564
Cow position:
Alignm length: 384
Alignm identity: 258
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 125, 7

Conread position: 190-566
Cow position:
Alignm length: 385
Alignm identity: 240
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 6

Conread position: 192-539
Cow position:
Alignm length: 361
Alignm identity: 238
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 225, 54

Conread position: 194-536
Cow position:
Alignm length: 355
Alignm identity: 231
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 45, 21

Conread position: 194-552
Cow position:
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 37

Conread position: 194-553
Cow position:
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 41

Conread position: 195-403
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 115, 29

Conread position: 195-404
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 93, 36

Conread position: 195-413
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 36

Conread position: 195-414
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 136, 36

Conread position: 195-418
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 36

Conread position: 195-422
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 29

Conread position: 195-423
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 138, 36

Conread position: 195-433
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 130, 184

Conread position: 195-437
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 36

Conread position: 195-448
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 230, 29

Conread position: 195-469
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 127, 29

Conread position: 195-486
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 93, 36

Conread position: 195-486
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 121, 29

Conread position: 195-494
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 77, 29

Conread position: 195-519
Cow position:
Alignm length: 331
Alignm identity: 208
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 36

Conread position: 195-558
Cow position:
Alignm length: 377
Alignm identity: 242
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 65, 169

Conread position: 195-567
Cow position:
Alignm length: 383
Alignm identity: 250
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 220, 138

Conread position: 195-567
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 136, 40

Conread position: 195-582
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 38

Conread position: 195-582
Cow position:
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 36

Conread position: 195-582
Cow position:
Alignm length: 408
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 21

Conread position: 196-488
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 28

Conread position: 196-522
Cow position:
Alignm length: 329
Alignm identity: 213
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 81, 175

Conread position: 196-543
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 131, 35

Conread position: 196-552
Cow position:
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 28

Conread position: 196-562
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 35

Conread position: 197-424
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 27

Conread position: 197-424
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 27

Conread position: 197-545
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 118, 34

Conread position: 197-557
Cow position:
Alignm length: 367
Alignm identity: 238
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 118, 36

Conread position: 198-543
Cow position:
Alignm length: 350
Alignm identity: 234
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 134, 26

Conread position: 198-551
Cow position:
Alignm length: 363
Alignm identity: 238
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 116, 279

Conread position: 201-564
Cow position:
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 30

Conread position: 203-404
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 203-408
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 128, 28

Conread position: 203-426
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 128, 28

Conread position: 203-516
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 264, 28

Conread position: 203-516
Cow position:
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 21

Conread position: 203-543
Cow position:
Alignm length: 354
Alignm identity: 243
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 128, 28

Conread position: 203-554
Cow position:
Alignm length: 357
Alignm identity: 233
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 122, 21

Conread position: 203-557
Cow position:
Alignm length: 367
Alignm identity: 238
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 175

Conread position: 203-561
Cow position:
Alignm length: 365
Alignm identity: 237
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 143, 21

Conread position: 203-562
Cow position:
Alignm length: 372
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 28

Conread position: 203-582
Cow position:
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 28

Conread position: 204-543
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 56

Conread position: 204-564
Cow position:
Alignm length: 373
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 20

Conread position: 205-441
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 126, 26

Conread position: 207-532
Cow position:
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 15

Conread position: 207-571
Cow position:
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 208-413
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 208-582
Cow position:
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 23

Conread position: 210-522
Cow position:
Alignm length: 322
Alignm identity: 206
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 107, 21

Conread position: 210-553
Cow position:
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 212-566
Cow position:
Alignm length: 364
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 12

Conread position: 215-423
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 165

Conread position: 215-552
Cow position:
Alignm length: 352
Alignm identity: 246
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 116, 18

Conread position: 215-553
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 9

Conread position: 215-553
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 137

Conread position: 215-578
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 216-413
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 88

Conread position: 216-413
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 115, 15

Conread position: 222-570
Cow position:
Alignm length: 362
Alignm identity: 246
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 146

Conread position: 223-433
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 199

Conread position: 223-562
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 193, 106

Conread position: 225-486
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 109, 77

Conread position: 225-534
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 143

Conread position: 225-539
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 194, 75

Conread position: 227-435
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 147

Conread position: 231-414
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 148

Conread position: 235-553
Cow position:
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 98

Conread position: 244-519
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 98

Conread position: 245-574
Cow position:
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 50

Conread position: 248-414
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 130

Conread position: 250-540
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 250-557
Cow position:
Alignm length: 313
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 26

Conread position: 257-489
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 114

Conread position: 261-578
Cow position:
Alignm length: 333
Alignm identity: 238
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 70, 97

Conread position: 270-562
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 153

Conread position: 274-552
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 94

Conread position: 275-486
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 93

Conread position: 285-543
Cow position:
Alignm length: 270
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 289-460
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 289-540
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 81

Conread position: 293-582
Cow position:
Alignm length: 291
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 126, 261

Conread position: 298-566
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 78

Conread position: 308-521
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 311-553
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 125

Conread position: 330-561
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 45

Conread position: 331-578
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 17

Conread position: 331-582
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 37

Conread position: 341-553
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 32

Conread position: 343-538
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 38

Conread position: 349-543
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 139

Conread position: 349-571
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 145

Conread position: 367-578
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 125, 7

Conread position: 374-582
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 118

Show alignments to all cow chromosomes.