Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 1-564
Cow position:
Alignm length: 579
Alignm identity: 374
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 125, 57

Conread position: 3-512
Cow position:
Alignm length: 517
Alignm identity: 335
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 53

Conread position: 12-413
Cow position:
Alignm length: 408
Alignm identity: 282
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 114, 61

Conread position: 12-547
Cow position:
Alignm length: 561
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 38

Conread position: 22-402
Cow position:
Alignm length: 392
Alignm identity: 262
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 92

Conread position: 22-479
Cow position:
Alignm length: 463
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 112

Conread position: 31-557
Cow position:
Alignm length: 536
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 14

Conread position: 89-553
Cow position:
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 45

Conread position: 112-433
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 5, 35

Conread position: 147-423
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 7

Conread position: 154-423
Cow position:
Alignm length: 272
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 177, 42

Conread position: 154-555
Cow position:
Alignm length: 408
Alignm identity: 267
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 30

Conread position: 166-413
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 79

Conread position: 171-444
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 21, 26

Conread position: 178-582
Cow position:
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 181-557
Cow position:
Alignm length: 384
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 52

Conread position: 184-469
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 147, 12

Conread position: 184-571
Cow position:
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 12

Conread position: 185-452
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 132, 19

Conread position: 186-542
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 144, 10

Conread position: 186-578
Cow position:
Alignm length: 405
Alignm identity: 289
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 10

Conread position: 187-427
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 9

Conread position: 188-403
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 127, 8

Conread position: 188-413
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 143, 9

Conread position: 188-542
Cow position:
Alignm length: 361
Alignm identity: 233
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 37

Conread position: 188-543
Cow position:
Alignm length: 369
Alignm identity: 241
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 139, 8

Conread position: 188-562
Cow position:
Alignm length: 380
Alignm identity: 255
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 8, 118

Conread position: 189-521
Cow position:
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 42

Conread position: 189-553
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 7

Conread position: 189-558
Cow position:
Alignm length: 381
Alignm identity: 253
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 138, 7

Conread position: 189-564
Cow position:
Alignm length: 388
Alignm identity: 263
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 136, 7

Conread position: 190-449
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 137, 6

Conread position: 190-539
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 141, 6

Conread position: 190-574
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 25

Conread position: 192-553
Cow position:
Alignm length: 365
Alignm identity: 247
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 17

Conread position: 192-557
Cow position:
Alignm length: 378
Alignm identity: 254
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 138, 39

Conread position: 193-404
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 155, 10

Conread position: 195-402
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 136, 36

Conread position: 195-413
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 46

Conread position: 195-424
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 131, 34

Conread position: 195-429
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 34, 102

Conread position: 195-438
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 38

Conread position: 195-440
Cow position:
Alignm length: 249
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 34

Conread position: 195-444
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 138, 8

Conread position: 195-451
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 136, 25

Conread position: 195-452
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 239, 138

Conread position: 195-483
Cow position:
Alignm length: 300
Alignm identity: 199
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 125, 36

Conread position: 195-485
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 136, 36

Conread position: 195-520
Cow position:
Alignm length: 335
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 136, 25

Conread position: 195-531
Cow position:
Alignm length: 348
Alignm identity: 235
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 136, 36

Conread position: 195-543
Cow position:
Alignm length: 355
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 107, 29

Conread position: 195-553
Cow position:
Alignm length: 366
Alignm identity: 247
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 231, 76

Conread position: 195-553
Cow position:
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 36

Conread position: 195-553
Cow position:
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 9

Conread position: 195-557
Cow position:
Alignm length: 372
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 139, 38

Conread position: 195-566
Cow position:
Alignm length: 375
Alignm identity: 245
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 239, 75

Conread position: 195-571
Cow position:
Alignm length: 383
Alignm identity: 254
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 212, 36

Conread position: 196-422
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 164, 35

Conread position: 196-423
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 101

Conread position: 196-426
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 35

Conread position: 196-543
Cow position:
Alignm length: 356
Alignm identity: 247
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 135, 35

Conread position: 196-557
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 7

Conread position: 196-566
Cow position:
Alignm length: 391
Alignm identity: 267
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 86, 35

Conread position: 197-582
Cow position:
Alignm length: 395
Alignm identity: 260
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 114, 23

Conread position: 198-554
Cow position:
Alignm length: 365
Alignm identity: 240
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 26

Conread position: 200-467
Cow position:
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 200-541
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 130, 31

Conread position: 200-562
Cow position:
Alignm length: 373
Alignm identity: 251
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 166, 24

Conread position: 200-582
Cow position:
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 24

Conread position: 201-490
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 8

Conread position: 201-543
Cow position:
Alignm length: 355
Alignm identity: 237
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 10, 19

Conread position: 203-412
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 203-413
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 112, 21

Conread position: 203-413
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 203-424
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 175

Conread position: 203-427
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 28

Conread position: 203-438
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 128, 28

Conread position: 203-539
Cow position:
Alignm length: 343
Alignm identity: 219
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 202, 30

Conread position: 203-543
Cow position:
Alignm length: 349
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 28

Conread position: 203-560
Cow position:
Alignm length: 364
Alignm identity: 240
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 40

Conread position: 203-561
Cow position:
Alignm length: 370
Alignm identity: 250
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 128, 28

Conread position: 203-566
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 32

Conread position: 204-398
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 27

Conread position: 204-485
Cow position:
Alignm length: 290
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 116, 91

Conread position: 204-557
Cow position:
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 27

Conread position: 204-582
Cow position:
Alignm length: 388
Alignm identity: 254
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 215, 27

Conread position: 206-428
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 28

Conread position: 206-566
Cow position:
Alignm length: 375
Alignm identity: 239
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 17

Conread position: 206-578
Cow position:
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 9

Conread position: 207-508
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 65, 32

Conread position: 207-542
Cow position:
Alignm length: 345
Alignm identity: 219
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 24

Conread position: 207-557
Cow position:
Alignm length: 364
Alignm identity: 243
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 120, 46

Conread position: 207-563
Cow position:
Alignm length: 364
Alignm identity: 245
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 25, 102

Conread position: 208-423
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 16

Conread position: 208-538
Cow position:
Alignm length: 332
Alignm identity: 212
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 81

Conread position: 209-557
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 22

Conread position: 210-471
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 121, 21

Conread position: 210-543
Cow position:
Alignm length: 343
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 108, 21

Conread position: 211-423
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 20

Conread position: 212-434
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 115, 19

Conread position: 213-437
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 126, 118

Conread position: 215-534
Cow position:
Alignm length: 327
Alignm identity: 218
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 170

Conread position: 215-544
Cow position:
Alignm length: 335
Alignm identity: 222
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 16

Conread position: 215-562
Cow position:
Alignm length: 350
Alignm identity: 233
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 9

Conread position: 215-581
Cow position:
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 7

Conread position: 218-414
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 26

Conread position: 219-563
Cow position:
Alignm length: 366
Alignm identity: 252
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 11

Conread position: 220-582
Cow position:
Alignm length: 386
Alignm identity: 265
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 71, 227

Conread position: 223-404
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 108, 79

Conread position: 226-433
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 198, 13

Conread position: 226-547
Cow position:
Alignm length: 327
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 105, 110

Conread position: 227-542
Cow position:
Alignm length: 323
Alignm identity: 217
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 13

Conread position: 230-430
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 144

Conread position: 231-449
Cow position:
Alignm length: 221
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 194, 85

Conread position: 244-568
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 301

Conread position: 246-562
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 85, 134

Conread position: 255-520
Cow position:
Alignm length: 276
Alignm identity: 180
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 81

Conread position: 257-581
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 101

Conread position: 258-549
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 92

Conread position: 259-562
Cow position:
Alignm length: 309
Alignm identity: 203
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 69

Conread position: 275-582
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 278, 21

Conread position: 276-541
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 192, 55

Conread position: 277-558
Cow position:
Alignm length: 283
Alignm identity: 186
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 205, 5

Conread position: 278-539
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 85

Conread position: 278-547
Cow position:
Alignm length: 284
Alignm identity: 199
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 46, 208

Conread position: 286-582
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 133, 10

Conread position: 290-444
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 10, 85

Conread position: 302-541
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 309-582
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 90

Conread position: 313-571
Cow position:
Alignm length: 263
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 60

Conread position: 332-582
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 46

Conread position: 342-582
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 349-553
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 34

Conread position: 349-567
Cow position:
Alignm length: 220
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 66

Conread position: 358-553
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 382-539
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 439-582
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 11

Show alignments to all cow chromosomes.