Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 1-484
Cow position: chrX:38840464-38840939 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 155

Conread position: 1-538
Cow position: chrX:37066885-37067425 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 367
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 109, 149

Conread position: 1-540
Cow position: chrX:24259998-24259468 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 362
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 43

Conread position: 1-554
Cow position: chrX:7425039-7425590 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 132

Conread position: 2-540
Cow position: chrX:40788769-40789317 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 3-534
Cow position: chrX:2764448-2764967 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 92

Conread position: 12-521
Cow position: chrX:158208-157685 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 60

Conread position: 13-566
Cow position: chrX:38549036-38549584 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 365
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 95, 30

Conread position: 21-543
Cow position: chrX:29032015-29032524 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 343
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 301, 106

Conread position: 22-557
Cow position: chrX:17631200-17630673 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 112

Conread position: 37-409
Cow position: chrX:22821658-22822027 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 89, 96

Conread position: 154-514
Cow position: chrX:18293652-18294003 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 72

Conread position: 154-557
Cow position: chrX:630580-630182 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 143, 20

Conread position: 159-582
Cow position: chrX:21815985-21816423 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 55

Conread position: 161-489
Cow position: chrX:9635452-9635130 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 211
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 23

Conread position: 171-538
Cow position: chrX:25281729-25281374 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 26, 13

Conread position: 173-578
Cow position: chrX:24827066-24827461 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 37

Conread position: 174-542
Cow position: chrX:30729662-30729299 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 10

Conread position: 174-553
Cow position: chrX:35925708-35926081 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 174-582
Cow position: chrX:4631929-4631513 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 177-402
Cow position: chrX:19023182-19023413 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 7

Conread position: 184-566
Cow position: chrX:42247431-42247045 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 163, 19

Conread position: 186-442
Cow position: chrX:41743668-41743922 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 10

Conread position: 187-543
Cow position: chrX:11082857-11082508 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 9

Conread position: 188-429
Cow position: chrX:40035692-40035447 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 8

Conread position: 188-436
Cow position: chrX:14884205-14883955 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 8

Conread position: 188-557
Cow position: chrX:25337936-25338315 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 8

Conread position: 188-557
Cow position: chrX:28111263-28111637 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 8

Conread position: 188-582
Cow position: chrX:35632997-35632599 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 77, 8

Conread position: 189-553
Cow position: chrX:11981889-11982262 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 7

Conread position: 190-433
Cow position: chrX:17725737-17725974 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 8

Conread position: 190-484
Cow position: chrX:28845605-28845888 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 162, 6

Conread position: 190-490
Cow position: chrX:488249-488544 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 141, 7

Conread position: 190-520
Cow position: chrX:24366070-24365730 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 6

Conread position: 190-563
Cow position: chrX:28787125-28787480 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 191, 6

Conread position: 190-566
Cow position: chrX:38094766-38094383 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 141, 6

Conread position: 190-568
Cow position: chrX:18695162-18694793 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 264, 6

Conread position: 191-578
Cow position: chrX:12826505-12826905 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 43

Conread position: 192-409
Cow position: chrX:21665834-21665616 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 33

Conread position: 194-558
Cow position: chrX:11718018-11717654 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 175, 30

Conread position: 195-404
Cow position: chrX:36692998-36693207 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 121, 25

Conread position: 195-413
Cow position: chrX:8797011-8797233 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 131, 29

Conread position: 195-413
Cow position: chrX:14924763-14924981 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 36

Conread position: 195-413
Cow position: chrX:38439236-38439458 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 36

Conread position: 195-423
Cow position: chrX:34401760-34401988 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 136, 36

Conread position: 195-430
Cow position: chrX:1616288-1616047 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 39

Conread position: 195-433
Cow position: chrX:8730842-8731086 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 34

Conread position: 195-433
Cow position: chrX:37232172-37232413 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 132, 36

Conread position: 195-433
Cow position: chrX:40269239-40269489 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 65, 36

Conread position: 195-438
Cow position: chrX:30162760-30163002 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 29

Conread position: 195-450
Cow position: chrX:40557913-40557662 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 236, 36

Conread position: 195-469
Cow position: chrX:21672314-21672594 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 136, 29

Conread position: 195-487
Cow position: chrX:43647981-43647686 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 81

Conread position: 195-520
Cow position: chrX:45404071-45403734 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 219
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 36

Conread position: 195-538
Cow position: chrX:29289339-29289687 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 234
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 111, 29

Conread position: 195-557
Cow position: chrX:41733421-41733071 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 238
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 136, 20

Conread position: 195-558
Cow position: chrX:27432156-27431789 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 102, 36

Conread position: 195-564
Cow position: chrX:17964759-17964387 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 29

Conread position: 195-566
Cow position: chrX:38963872-38964245 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 215, 29

Conread position: 195-566
Cow position: chrX:41122835-41123196 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 242
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 29

Conread position: 195-571
Cow position: chrX:8925466-8925839 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 126

Conread position: 195-571
Cow position: chrX:42171536-42171153 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 251
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 25

Conread position: 195-574
Cow position: chrX:39546210-39545837 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 127, 29

Conread position: 195-578
Cow position: chrX:8558700-8558309 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 38

Conread position: 196-434
Cow position: chrX:28836140-28835905 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 50

Conread position: 196-449
Cow position: chrX:26441016-26440765 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 124, 35

Conread position: 196-452
Cow position: chrX:46722979-46722717 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 37

Conread position: 196-525
Cow position: chrX:5638405-5638072 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 28

Conread position: 196-539
Cow position: chrX:7646022-7646361 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 102

Conread position: 196-562
Cow position: chrX:7497009-7497371 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 101, 27

Conread position: 196-566
Cow position: chrX:27394250-27393889 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 328, 35

Conread position: 196-582
Cow position: chrX:11674828-11675224 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 35

Conread position: 196-582
Cow position: chrX:37956130-37956510 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 28

Conread position: 197-433
Cow position: chrX:45414535-45414300 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 118, 34

Conread position: 197-557
Cow position: chrX:31260865-31260487 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 134, 27

Conread position: 197-562
Cow position: chrX:21664957-21664589 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 134, 6

Conread position: 198-554
Cow position: chrX:2300699-2301049 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 133, 33

Conread position: 200-434
Cow position: chrX:42381332-42381102 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 147, 31

Conread position: 201-490
Cow position: chrX:11746611-11746904 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 130, 23

Conread position: 203-413
Cow position: chrX:2648579-2648373 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 203-413
Cow position: chrX:5017637-5017434 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 203-422
Cow position: chrX:33855462-33855244 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 28

Conread position: 203-438
Cow position: chrX:8682159-8681922 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 30

Conread position: 203-539
Cow position: chrX:4554169-4554489 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 183, 21

Conread position: 203-555
Cow position: chrX:6563283-6563645 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 112, 21

Conread position: 203-557
Cow position: chrX:24132380-24132023 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 17

Conread position: 203-558
Cow position: chrX:9201318-9201677 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 27

Conread position: 203-562
Cow position: chrX:36840644-36840995 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 21

Conread position: 203-570
Cow position: chrX:3154475-3154100 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 130, 21

Conread position: 203-578
Cow position: chrX:15994170-15994550 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 97, 131

Conread position: 204-438
Cow position: chrX:33827250-33827012 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 127, 27

Conread position: 204-502
Cow position: chrX:8517648-8517945 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 202, 20

Conread position: 204-550
Cow position: chrX:25571224-25570873 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 99

Conread position: 204-557
Cow position: chrX:32431399-32431752 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 31

Conread position: 205-414
Cow position: chrX:21642705-21642497 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 19

Conread position: 206-413
Cow position: chrX:29509670-29509461 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 28

Conread position: 206-450
Cow position: chrX:29542446-29542200 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 125, 88

Conread position: 207-413
Cow position: chrX:35681120-35681321 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 70

Conread position: 207-551
Cow position: chrX:13245366-13245719 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 12

Conread position: 207-552
Cow position: chrX:3146971-3147324 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 90

Conread position: 207-555
Cow position: chrX:7571681-7572032 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 220, 24

Conread position: 207-555
Cow position: chrX:41884643-41884286 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 118, 24

Conread position: 207-558
Cow position: chrX:6690473-6690131 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 124, 24

Conread position: 207-562
Cow position: chrX:25713575-25713927 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 124, 17

Conread position: 207-566
Cow position: chrX:5900232-5900599 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 24

Conread position: 207-566
Cow position: chrX:13382099-13382462 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 124, 168

Conread position: 208-562
Cow position: chrX:17042466-17042814 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 23

Conread position: 209-426
Cow position: chrX:13177688-13177475 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 106, 11

Conread position: 209-564
Cow position: chrX:40692961-40692617 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 225, 15

Conread position: 209-582
Cow position: chrX:13058357-13058729 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 22

Conread position: 210-546
Cow position: chrX:10959625-10959278 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 165

Conread position: 211-582
Cow position: chrX:24200971-24201339 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 19

Conread position: 212-432
Cow position: chrX:45110434-45110655 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 122, 163

Conread position: 212-566
Cow position: chrX:29602053-29601691 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 29

Conread position: 213-552
Cow position: chrX:20792037-20791692 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 18

Conread position: 215-446
Cow position: chrX:34663060-34662834 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 9

Conread position: 215-492
Cow position: chrX:9227201-9226911 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 167

Conread position: 215-543
Cow position: chrX:42492731-42492409 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 9

Conread position: 215-557
Cow position: chrX:39126121-39126454 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 215-564
Cow position: chrX:2786765-2786422 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 190, 9

Conread position: 215-571
Cow position: chrX:30543503-30543141 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 9

Conread position: 217-539
Cow position: chrX:27023928-27024240 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 7, 92

Conread position: 217-573
Cow position: chrX:29120843-29121192 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 7

Conread position: 217-582
Cow position: chrX:2186043-2186419 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 14

Conread position: 223-543
Cow position: chrX:37910242-37910559 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 203, 74

Conread position: 224-404
Cow position: chrX:6234659-6234481 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 89

Conread position: 224-539
Cow position: chrX:31385983-31386282 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 107, 27

Conread position: 224-557
Cow position: chrX:31340495-31340838 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 107, 231

Conread position: 225-540
Cow position: chrX:28929633-28929951 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 62

Conread position: 226-413
Cow position: chrX:35273144-35273335 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 28, 149

Conread position: 226-563
Cow position: chrX:43730422-43730090 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 199, 94

Conread position: 226-582
Cow position: chrX:2147128-2147499 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 7

Conread position: 228-465
Cow position: chrX:280925-281161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 87, 67

Conread position: 231-548
Cow position: chrX:16687234-16687558 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 72, 29

Conread position: 244-553
Cow position: chrX:905157-905455 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 175, 96

Conread position: 245-457
Cow position: chrX:12094599-12094381 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 130

Conread position: 247-562
Cow position: chrX:47177967-47178276 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 13

Conread position: 248-566
Cow position: chrX:31252230-31252544 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 28

Conread position: 250-457
Cow position: chrX:24309006-24308791 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 92

Conread position: 261-562
Cow position: chrX:38999671-38999980 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 15

Conread position: 265-573
Cow position: chrX:23666954-23667265 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 193

Conread position: 269-547
Cow position: chrX:23254378-23254086 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 281-562
Cow position: chrX:6479845-6480109 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 134, 0

Conread position: 287-566
Cow position: chrX:11085207-11084928 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 89

Conread position: 289-554
Cow position: chrX:39415514-39415245 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 22

Conread position: 293-553
Cow position: chrX:29680404-29680138 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 81

Conread position: 296-542
Cow position: chrX:21566261-21566520 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 302-564
Cow position: chrX:19878915-19879173 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 63

Conread position: 305-550
Cow position: chrX:10329042-10328791 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 64

Conread position: 308-524
Cow position: chrX:26493766-26493538 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 332-569
Cow position: chrX:25441091-25440862 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 226, 31

Show alignments to all cow chromosomes.