Cow genome map
| Conread name: | rgul0118_l22.y1 |
| Conread position: | 143-571 |
| Cow position: | chr10:20918240-20917793 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 144-527 |
| Cow position: | chr10:10401224-10400849 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 145-344 |
| Cow position: | chr10:5344848-5344651 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 48 |
| Conread position: | 145-500 |
| Cow position: | chr10:10385020-10385363 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 16 |
| Conread position: | 146-400 |
| Cow position: | chr10:11120651-11120408 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 149, 52 |
| Conread position: | 146-487 |
| Cow position: | chr10:23309091-23309439 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 13 |
| Conread position: | 146-571 |
| Cow position: | chr10:57583053-57583505 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 95, 15 |
| Conread position: | 150-510 |
| Cow position: | chr10:22838331-22838689 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 150-521 |
| Cow position: | chr10:2710081-2710439 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 12 |
| Conread position: | 150-521 |
| Cow position: | chr10:28377591-28377226 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 17, 96 |
| Conread position: | 150-551 |
| Cow position: | chr10:28136622-28136228 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 150-551 |
| Cow position: | chr10:41583164-41582780 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 253, 14 |
| Conread position: | 159-465 |
| Cow position: | chr10:61104790-61104475 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 159-522 |
| Cow position: | chr10:11816417-11816055 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 53 |
| Conread position: | 166-530 |
| Cow position: | chr10:32388542-32388912 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 95 |
| Conread position: | 167-551 |
| Cow position: | chr10:56970967-56970594 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 342, 61 |
| Conread position: | 168-465 |
| Cow position: | chr10:47627996-47628288 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 240, 18 |
| Conread position: | 184-554 |
| Cow position: | chr10:642085-642444 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 13 |
| Conread position: | 197-569 |
| Cow position: | chr10:18042514-18042875 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 208, 29 |
| Conread position: | 223-517 |
| Cow position: | chr10:67076446-67076746 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 260-518 |
| Cow position: | chr10:5344338-5344080 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 145, 8 |
| Conread position: | 268-520 |
| Cow position: | chr10:65280481-65280732 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 308-570 |
| Cow position: | chr10:50014093-50013832 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 103, 211 |
| Conread position: | 311-473 |
| Cow position: | chr10:57420199-57420362 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 33 |
| Conread position: | 311-530 |
| Cow position: | chr10:40511333-40511559 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 317-530 |
| Cow position: | chr10:13401691-13401482 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 318-496 |
| Cow position: | chr10:46461983-46462156 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 57 |
| Conread position: | 335-485 |
| Cow position: | chr10:52681657-52681506 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 71, 119 |
| Conread position: | 361-490 |
| Cow position: | chr10:6279884-6279752 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 373-530 |
| Cow position: | chr10:25638090-25638248 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 374-517 |
| Cow position: | chr10:23333045-23332902 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 375-523 |
| Cow position: | chr10:44261757-44261908 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.