Cow genome map
| Conread name: | rgul0118_l22.y1 |
| Conread position: | 126-496 |
| Cow position: | chr11:48155839-48155461 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 137-401 |
| Cow position: | chr11:33287887-33287617 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 133, 75 |
| Conread position: | 146-567 |
| Cow position: | chr11:10374599-10375005 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 18 |
| Conread position: | 146-571 |
| Cow position: | chr11:64757377-64756974 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 14 |
| Conread position: | 150-543 |
| Cow position: | chr11:24398615-24398232 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 14 |
| Conread position: | 151-570 |
| Cow position: | chr11:25936115-25936545 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 123 |
| Conread position: | 155-532 |
| Cow position: | chr11:48699651-48699272 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 183-522 |
| Cow position: | chr11:23983028-23982671 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 7 |
| Conread position: | 187-571 |
| Cow position: | chr11:74709724-74710119 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 80 |
| Conread position: | 203-528 |
| Cow position: | chr11:15469778-15469466 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 202, 23 |
| Conread position: | 213-493 |
| Cow position: | chr11:47571490-47571774 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 146 |
| Conread position: | 232-527 |
| Cow position: | chr11:18383778-18384073 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 45 |
| Conread position: | 232-551 |
| Cow position: | chr11:85724511-85724829 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 86, 45 |
| Conread position: | 276-522 |
| Cow position: | chr11:12072411-12072658 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 277-525 |
| Cow position: | chr11:56579944-56580194 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 278-502 |
| Cow position: | chr11:56523338-56523113 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 296-521 |
| Cow position: | chr11:57223569-57223791 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 296-545 |
| Cow position: | chr11:28764206-28763956 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 305-528 |
| Cow position: | chr11:26316961-26317185 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 310-511 |
| Cow position: | chr11:36354395-36354600 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 342-571 |
| Cow position: | chr11:80390180-80390422 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 343-530 |
| Cow position: | chr11:9711768-9711578 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 358-552 |
| Cow position: | chr11:40098770-40098965 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 420-568 |
| Cow position: | chr11:8403060-8403212 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 85 |
Show alignments to all cow chromosomes.