Cow genome map
| Conread name: | rgul0118_l22.y1 |
| Conread position: | 135-476 |
| Cow position: | chr3:48458095-48458423 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 225, 27 |
| Conread position: | 135-551 |
| Cow position: | chr3:69222572-69222155 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 27 |
| Conread position: | 138-487 |
| Cow position: | chr3:12018796-12019130 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 144-561 |
| Cow position: | chr3:66334993-66335391 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 260, 19 |
| Conread position: | 145-491 |
| Cow position: | chr3:7662505-7662171 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 260, 19 |
| Conread position: | 145-498 |
| Cow position: | chr3:24540111-24540473 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 133, 173 |
| Conread position: | 145-509 |
| Cow position: | chr3:32509935-32509591 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 145-526 |
| Cow position: | chr3:18625816-18626200 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 20 |
| Conread position: | 145-551 |
| Cow position: | chr3:9463488-9463099 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 283 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 132, 16 |
| Conread position: | 146-493 |
| Cow position: | chr3:73443938-73444271 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 148, 44 |
| Conread position: | 150-493 |
| Cow position: | chr3:1359684-1359344 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 16 |
| Conread position: | 150-500 |
| Cow position: | chr3:74542226-74541888 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 255, 14 |
| Conread position: | 150-534 |
| Cow position: | chr3:8559218-8558831 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 125, 16 |
| Conread position: | 151-563 |
| Cow position: | chr3:22375672-22376088 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 13 |
| Conread position: | 155-524 |
| Cow position: | chr3:43383592-43383950 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 158-492 |
| Cow position: | chr3:961417-961753 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 159-488 |
| Cow position: | chr3:22877790-22878114 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 58 |
| Conread position: | 165-570 |
| Cow position: | chr3:18905099-18904694 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 166-570 |
| Cow position: | chr3:56301118-56300718 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 285 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 245, 31 |
| Conread position: | 168-570 |
| Cow position: | chr3:33721209-33720830 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 274 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 236, 98 |
| Conread position: | 189-524 |
| Cow position: | chr3:16528042-16527718 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 216, 19 |
| Conread position: | 190-570 |
| Cow position: | chr3:34820630-34821011 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 204, 22 |
| Conread position: | 197-554 |
| Cow position: | chr3:2486522-2486170 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 160, 51 |
| Conread position: | 235-532 |
| Cow position: | chr3:73428831-73428545 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 111, 33 |
| Conread position: | 236-551 |
| Cow position: | chr3:7849850-7849529 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 41 |
| Conread position: | 278-520 |
| Cow position: | chr3:18036849-18036606 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 279-561 |
| Cow position: | chr3:76283920-76284198 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 129, 32 |
| Conread position: | 279-571 |
| Cow position: | chr3:44100610-44100313 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 290-526 |
| Cow position: | chr3:17783274-17783037 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 104, 50 |
| Conread position: | 313-522 |
| Cow position: | chr3:46050667-46050870 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 186, 27 |
| Conread position: | 355-530 |
| Cow position: | chr3:78912863-78912684 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 14 |
Show alignments to all cow chromosomes.