Cow genome map


           Conread name:
           rhea37_k16.y1
        

               Conread position:
               65-365
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               76-493
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               77-467
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               141, 22
               

               Conread position:
               80-493
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 119
               

               Conread position:
               85-321
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               185, 110
               

               Conread position:
               85-392
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               150, 70
               

               Conread position:
               86-397
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 113
               

               Conread position:
               86-496
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               88-496
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               97-492
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               102-395
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               118, 92
               

               Conread position:
               102-485
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               61, 66
               

               Conread position:
               103-496
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               345, 97
               

               Conread position:
               106-331
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               114, 31
               

               Conread position:
               108-373
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               211, 40
               

               Conread position:
               109-494
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 86
               

               Conread position:
               109-494
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               110-473
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 45
               

               Conread position:
               114-473
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               114-496
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               150, 41
               

               Conread position:
               116-448
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               253, 78
               

               Conread position:
               124-377
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               99, 35
               

               Conread position:
               125-496
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 34
               

               Conread position:
               131-333
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               209-487
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               102, 55
               

               Conread position:
               212-490
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               213-496
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 14
               

               Conread position:
               213-496
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 11
               

               Conread position:
               220-496
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 244
               

               Conread position:
               220-496
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               225-372
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               225-372
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               226-363
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               226-493
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 249
               

               Conread position:
               226-494
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 243
               

               Conread position:
               226-495
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 127
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 243
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 243
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 243
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 242
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 243
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 243
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 244
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               227-492
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               227-495
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 205
               

               Conread position:
               227-496
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               227-496
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 243
               

               Conread position:
               233-361
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               233-453
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               235-360
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               235-496
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               235-496
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               235-496
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               240-496
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 116
               

               Conread position:
               246-496
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               253-445
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               156
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               128, 143
               

               Conread position:
               253-496
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               253-496
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               128, 208
               

               Conread position:
               253-496
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               58, 220
               

               Conread position:
               253-496
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               253-496
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 212
               

               Conread position:
               253-496
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               131, 220
               

               Conread position:
               253-496
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               253-496
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 91
               

               Conread position:
               254-492
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               191, 14
               

               Conread position:
               255-496
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 56
               

               Conread position:
               258-496
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               259-444
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               259-485
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 202
               

               Conread position:
               259-490
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               259-491
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-495
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 157
               

               Conread position:
               259-495
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-495
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 89
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 207
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               259-496
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               262-496
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               263-496
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 125
               

               Conread position:
               264-439
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               264-487
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 0
               
Show alignments to all cow chromosomes.