Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 64-445 |
| Cow position: | chr10:15860725-15860371 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 76-298 |
| Cow position: | chr10:42629136-42629356 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 114 |
| Conread position: | 76-484 |
| Cow position: | chr10:28931208-28930805 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 80-494 |
| Cow position: | chr10:21900590-21900189 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 85-494 |
| Cow position: | chr10:32064768-32065186 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 131 |
| Conread position: | 85-495 |
| Cow position: | chr10:31524303-31524692 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 88-496 |
| Cow position: | chr10:38545702-38545317 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 104 |
| Conread position: | 89-270 |
| Cow position: | chr10:13364318-13364144 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 70 |
| Conread position: | 89-270 |
| Cow position: | chr10:13365508-13365334 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 70 |
| Conread position: | 97-486 |
| Cow position: | chr10:14861461-14861839 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 45 |
| Conread position: | 101-496 |
| Cow position: | chr10:3543014-3542632 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 98 |
| Conread position: | 106-490 |
| Cow position: | chr10:16476451-16476829 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 110-454 |
| Cow position: | chr10:38847935-38848269 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 47 |
| Conread position: | 110-486 |
| Cow position: | chr10:41775018-41774649 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 111, 78 |
| Conread position: | 111-496 |
| Cow position: | chr10:26596826-26597210 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 40 |
| Conread position: | 115-473 |
| Cow position: | chr10:11820999-11821341 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 252, 52 |
| Conread position: | 121-379 |
| Cow position: | chr10:20370987-20370752 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 156-390 |
| Cow position: | chr10:42749032-42749266 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 157-377 |
| Cow position: | chr10:42110599-42110812 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 204-496 |
| Cow position: | chr10:17432952-17432660 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 221-360 |
| Cow position: | chr10:62216929-62217072 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 223-496 |
| Cow position: | chr10:7281771-7281496 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 224-381 |
| Cow position: | chr10:8339718-8339881 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 225-360 |
| Cow position: | chr10:62778680-62778813 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 225-374 |
| Cow position: | chr10:124644-124788 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 225-475 |
| Cow position: | chr10:44294589-44294342 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 220, 129 |
| Conread position: | 226-374 |
| Cow position: | chr10:25359725-25359877 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-426 |
| Cow position: | chr10:32651059-32651262 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 113 |
| Conread position: | 226-495 |
| Cow position: | chr10:57989668-57989396 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr10:8290304-8290575 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 226-496 |
| Cow position: | chr10:19511932-19512205 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 226-496 |
| Cow position: | chr10:21487241-21487514 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 226-496 |
| Cow position: | chr10:38345036-38344762 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 244 |
| Conread position: | 226-496 |
| Cow position: | chr10:62408525-62408252 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 227-496 |
| Cow position: | chr10:30685186-30684916 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 227-496 |
| Cow position: | chr10:38538178-38537905 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 243 |
| Conread position: | 232-496 |
| Cow position: | chr10:39040964-39040706 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 252-495 |
| Cow position: | chr10:2120657-2120416 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 253-484 |
| Cow position: | chr10:54978895-54978675 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 253-494 |
| Cow position: | chr10:55093615-55093856 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 118, 213 |
| Conread position: | 253-496 |
| Cow position: | chr10:21400321-21400079 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 253-496 |
| Cow position: | chr10:21740402-21740160 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 230, 154 |
| Conread position: | 253-496 |
| Cow position: | chr10:25564908-25564669 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 192, 90 |
| Conread position: | 253-496 |
| Cow position: | chr10:28641889-28642130 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 253-496 |
| Cow position: | chr10:41877268-41877512 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 62 |
| Conread position: | 258-496 |
| Cow position: | chr10:39180138-39180377 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 259-371 |
| Cow position: | chr10:19758704-19758816 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-371 |
| Cow position: | chr10:19802909-19803021 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-377 |
| Cow position: | chr10:11685317-11685203 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 259-485 |
| Cow position: | chr10:19495930-19495705 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 164, 152 |
| Conread position: | 259-496 |
| Cow position: | chr10:280267-280016 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 76 |
| Conread position: | 259-496 |
| Cow position: | chr10:5849270-5849034 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 259-496 |
| Cow position: | chr10:14804192-14804425 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 259-496 |
| Cow position: | chr10:32578644-32578879 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 62 |
| Conread position: | 259-496 |
| Cow position: | chr10:41157803-41158039 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr10:51952266-51952030 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr10:56065029-56065265 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 262-496 |
| Cow position: | chr10:11698602-11698835 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
Show alignments to all cow chromosomes.