Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 72-367 |
| Cow position: | chr12:1138222-1138502 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 148, 107 |
| Conread position: | 85-420 |
| Cow position: | chr12:369743-370071 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 85-479 |
| Cow position: | chr12:1869404-1869804 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 102-462 |
| Cow position: | chr12:348542-348908 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 123, 97 |
| Conread position: | 205-496 |
| Cow position: | chr12:8197444-8197733 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 215-496 |
| Cow position: | chr12:2282800-2283082 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 221-372 |
| Cow position: | chr12:8311428-8311580 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 226-496 |
| Cow position: | chr12:1402741-1403014 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 226-496 |
| Cow position: | chr12:6406400-6406127 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr12:11098493-11098764 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 126 |
| Conread position: | 226-496 |
| Cow position: | chr12:22205497-22205224 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 226-496 |
| Cow position: | chr12:27932694-27932415 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 162 |
| Conread position: | 226-496 |
| Cow position: | chr12:28765768-28765499 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 226-496 |
| Cow position: | chr12:42859576-42859304 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 233-347 |
| Cow position: | chr12:45261887-45262000 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 235-445 |
| Cow position: | chr12:21902205-21902414 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 161, 21 |
| Conread position: | 235-490 |
| Cow position: | chr12:21198221-21198474 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 240-496 |
| Cow position: | chr12:14662366-14662108 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 228 |
| Conread position: | 244-368 |
| Cow position: | chr12:251792-251665 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 253-371 |
| Cow position: | chr12:21942044-21942162 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-490 |
| Cow position: | chr12:37558831-37559061 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 258-387 |
| Cow position: | chr12:21208686-21208814 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 259-491 |
| Cow position: | chr12:21254376-21254152 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 259-494 |
| Cow position: | chr12:21426975-21427207 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 259-496 |
| Cow position: | chr12:4157658-4157894 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 259-496 |
| Cow position: | chr12:16821756-16821992 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 161 |
| Conread position: | 259-496 |
| Cow position: | chr12:33986443-33986679 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 259-496 |
| Cow position: | chr12:43031104-43030870 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.