Cow genome map

Conread name: rhea37_k16.y1

Conread position: 72-281
Cow position: chr17:20402077-20402279 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 26

Conread position: 72-486
Cow position: chr17:12670083-12669678 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 95

Conread position: 86-496
Cow position: chr17:4082061-4082463 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 95

Conread position: 87-493
Cow position: chr17:18300392-18299993 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 74

Conread position: 102-487
Cow position: chr17:3708761-3708383 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 57

Conread position: 103-490
Cow position: chr17:20488021-20488398 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 93

Conread position: 104-473
Cow position: chr17:11026787-11026422 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 158, 53

Conread position: 114-494
Cow position: chr17:19019608-19019976 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 115-496
Cow position: chr17:15384301-15384691 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 351

Conread position: 209-496
Cow position: chr17:14040904-14040626 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 103, 0

Conread position: 225-361
Cow position: chr17:35592358-35592494 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 29

Conread position: 225-372
Cow position: chr17:602294-602151 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 225-387
Cow position: chr17:13856625-13856469 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 226-440
Cow position: chr17:25737801-25738018 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 226-495
Cow position: chr17:2579753-2580024 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 54

Conread position: 226-495
Cow position: chr17:6068700-6068964 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 226-495
Cow position: chr17:15850535-15850807 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 243

Conread position: 226-496
Cow position: chr17:3642698-3642423 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 246

Conread position: 226-496
Cow position: chr17:11087586-11087316 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 19

Conread position: 226-496
Cow position: chr17:14894291-14894564 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 243

Conread position: 226-496
Cow position: chr17:18103547-18103279 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 134

Conread position: 226-496
Cow position: chr17:19269228-19268957 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 88

Conread position: 227-496
Cow position: chr17:40804960-40805228 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 228-360
Cow position: chr17:20073100-20072969 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 233-372
Cow position: chr17:27345949-27346086 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 233-496
Cow position: chr17:16857382-16857115 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 8

Conread position: 235-496
Cow position: chr17:24029852-24029599 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 253-426
Cow position: chr17:181525-181696 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 92, 0

Conread position: 253-496
Cow position: chr17:1382652-1382410 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 253-496
Cow position: chr17:2262264-2262507 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 213

Conread position: 253-496
Cow position: chr17:43952401-43952159 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 258-496
Cow position: chr17:34156295-34156532 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 203

Conread position: 259-431
Cow position: chr17:24634122-24634294 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 259-432
Cow position: chr17:2248416-2248243 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 126

Conread position: 259-495
Cow position: chr17:8209274-8209510 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 132, 207

Conread position: 259-496
Cow position: chr17:6119876-6120111 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 93

Conread position: 259-496
Cow position: chr17:14216858-14216629 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 259-496
Cow position: chr17:15435959-15436195 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 259-496
Cow position: chr17:20665558-20665321 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 168, 207

Conread position: 259-496
Cow position: chr17:23324286-23324050 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 202, 194

Conread position: 259-496
Cow position: chr17:24782335-24782569 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 259-496
Cow position: chr17:31767871-31767635 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Show alignments to all cow chromosomes.