Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 15-496 |
| Cow position: | chr18:51660479-51660957 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 441, 0 |
| Conread position: | 86-328 |
| Cow position: | chr18:29237359-29237589 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 97-496 |
| Cow position: | chr18:8168928-8169320 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 97-496 |
| Cow position: | chr18:54171310-54170920 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 101-278 |
| Cow position: | chr18:51275700-51275535 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 103-487 |
| Cow position: | chr18:46868330-46867956 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 115, 78 |
| Conread position: | 167-491 |
| Cow position: | chr18:29765260-29765586 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 220-373 |
| Cow position: | chr18:24700772-24700616 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 222-496 |
| Cow position: | chr18:27987410-27987682 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 224-360 |
| Cow position: | chr18:16534322-16534462 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 226-465 |
| Cow position: | chr18:32652548-32652789 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 226-496 |
| Cow position: | chr18:14130735-14131009 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 244 |
| Conread position: | 226-496 |
| Cow position: | chr18:16088498-16088764 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 226-496 |
| Cow position: | chr18:16176272-16175999 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 226-496 |
| Cow position: | chr18:27837971-27837698 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr18:28973557-28973271 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 256 |
| Conread position: | 226-496 |
| Cow position: | chr18:36508678-36508951 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 244 |
| Conread position: | 226-496 |
| Cow position: | chr18:37505409-37505679 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 226-496 |
| Cow position: | chr18:40478728-40479001 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr18:52651265-52651536 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 233-361 |
| Cow position: | chr18:47719225-47719098 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 233-496 |
| Cow position: | chr18:33269184-33269442 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 235-359 |
| Cow position: | chr18:53786198-53786322 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 21 |
| Conread position: | 235-473 |
| Cow position: | chr18:23798003-23798241 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 235-478 |
| Cow position: | chr18:41840469-41840224 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 233 |
| Conread position: | 235-496 |
| Cow position: | chr18:51481195-51481452 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 235-496 |
| Cow position: | chr18:54023769-54023522 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 243-496 |
| Cow position: | chr18:33336225-33336483 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 228 |
| Conread position: | 253-361 |
| Cow position: | chr18:2019307-2019199 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-496 |
| Cow position: | chr18:51342056-51342298 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 258-360 |
| Cow position: | chr18:51310961-51311063 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-496 |
| Cow position: | chr18:11274730-11274494 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr18:22602863-22603097 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 259-496 |
| Cow position: | chr18:24040356-24040113 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 213 |
| Conread position: | 259-496 |
| Cow position: | chr18:33953199-33952965 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 259-496 |
| Cow position: | chr18:51462703-51462468 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 259-496 |
| Cow position: | chr18:55088548-55088308 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 66, 210 |
Show alignments to all cow chromosomes.