Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 74-496 |
| Cow position: | chr19:27052296-27051893 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 13 |
| Conread position: | 76-328 |
| Cow position: | chr19:17019036-17019287 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 84-487 |
| Cow position: | chr19:3138151-3138551 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 86-371 |
| Cow position: | chr19:263356-263646 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 88-496 |
| Cow position: | chr19:352427-352030 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 97-330 |
| Cow position: | chr19:39689253-39689481 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 121, 47 |
| Conread position: | 101-339 |
| Cow position: | chr19:32222788-32222552 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 101-495 |
| Cow position: | chr19:39669275-39668891 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 94 |
| Conread position: | 101-496 |
| Cow position: | chr19:162863-162485 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 56 |
| Conread position: | 108-326 |
| Cow position: | chr19:43257-43469 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 110-487 |
| Cow position: | chr19:32182838-32182475 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 111-312 |
| Cow position: | chr19:189682-189879 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 115-460 |
| Cow position: | chr19:32203399-32203734 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 106, 81 |
| Conread position: | 126-339 |
| Cow position: | chr19:35377418-35377629 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 208-495 |
| Cow position: | chr19:439108-438820 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 166 |
| Conread position: | 214-490 |
| Cow position: | chr19:893265-892991 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 214-496 |
| Cow position: | chr19:75919-75632 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 110 |
| Conread position: | 220-496 |
| Cow position: | chr19:341566-341843 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 221-415 |
| Cow position: | chr19:40817357-40817166 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 222-372 |
| Cow position: | chr19:4532283-4532132 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 225-387 |
| Cow position: | chr19:417016-417173 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 225-389 |
| Cow position: | chr19:28376842-28377003 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 226-496 |
| Cow position: | chr19:5729179-5729452 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr19:7488663-7488934 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 226-496 |
| Cow position: | chr19:33873776-33874047 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 199 |
| Conread position: | 226-496 |
| Cow position: | chr19:33941960-33942224 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 226-496 |
| Cow position: | chr19:39185196-39184923 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr19:39390858-39391127 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 188 |
| Conread position: | 235-496 |
| Cow position: | chr19:172570-172827 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 252-496 |
| Cow position: | chr19:2274006-2273762 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 204 |
| Conread position: | 253-496 |
| Cow position: | chr19:28593638-28593878 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 253-496 |
| Cow position: | chr19:32211699-32211457 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 208 |
| Conread position: | 258-444 |
| Cow position: | chr19:5208551-5208737 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-495 |
| Cow position: | chr19:204342-204578 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 7, 199 |
| Conread position: | 259-496 |
| Cow position: | chr19:772976-773211 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 259-496 |
| Cow position: | chr19:43144096-43144329 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 259-496 |
| Cow position: | chr19:52151450-52151214 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 273-420 |
| Cow position: | chr19:4386012-4386163 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.