Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 76-294 |
| Cow position: | chr21:4184120-4184331 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 85-472 |
| Cow position: | chr21:23861611-23861995 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 116 |
| Conread position: | 86-496 |
| Cow position: | chr21:359662-360058 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 87 |
| Conread position: | 88-496 |
| Cow position: | chr21:2540785-2540395 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 73 |
| Conread position: | 106-410 |
| Cow position: | chr21:6109873-6110174 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 109-490 |
| Cow position: | chr21:21926004-21925629 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 257, 23 |
| Conread position: | 118-496 |
| Cow position: | chr21:27565724-27566101 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 144, 14 |
| Conread position: | 126-494 |
| Cow position: | chr21:9892281-9892623 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 131-496 |
| Cow position: | chr21:21915027-21915383 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 147-490 |
| Cow position: | chr21:20744147-20743820 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 222, 56 |
| Conread position: | 203-496 |
| Cow position: | chr21:23812578-23812870 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 207-496 |
| Cow position: | chr21:29487-29769 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 218-494 |
| Cow position: | chr21:217325-217594 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 136, 9 |
| Conread position: | 220-496 |
| Cow position: | chr21:146343-146621 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 244 |
| Conread position: | 221-419 |
| Cow position: | chr21:34293437-34293631 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 223-496 |
| Cow position: | chr21:40271258-40270982 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 226-484 |
| Cow position: | chr21:30562228-30562489 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr21:2883323-2883048 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 245 |
| Conread position: | 226-496 |
| Cow position: | chr21:3779192-3779467 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 226-496 |
| Cow position: | chr21:10567094-10567367 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr21:10850503-10850775 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 226-496 |
| Cow position: | chr21:27282811-27283085 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 235 |
| Conread position: | 226-496 |
| Cow position: | chr21:31559230-31558961 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 226-496 |
| Cow position: | chr21:33251931-33252198 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 132 |
| Conread position: | 226-496 |
| Cow position: | chr21:35144182-35144455 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr21:48116527-48116799 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 241-496 |
| Cow position: | chr21:2416657-2416906 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 244-496 |
| Cow position: | chr21:13313210-13313466 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 226 |
| Conread position: | 253-490 |
| Cow position: | chr21:467346-467577 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 194, 100 |
| Conread position: | 253-490 |
| Cow position: | chr21:2476091-2475855 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 253-495 |
| Cow position: | chr21:7267081-7266834 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 218 |
| Conread position: | 259-444 |
| Cow position: | chr21:26650497-26650682 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-465 |
| Cow position: | chr21:6340022-6340228 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-494 |
| Cow position: | chr21:12055545-12055311 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr21:2511351-2511587 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr21:11406540-11406304 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 259-496 |
| Cow position: | chr21:11453200-11452966 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 259-496 |
| Cow position: | chr21:11506052-11506288 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 259-496 |
| Cow position: | chr21:37046076-37046312 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 259-496 |
| Cow position: | chr21:37371701-37371937 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr21:39425519-39425753 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 262-376 |
| Cow position: | chr21:26638006-26637892 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-475 |
| Cow position: | chr21:46916046-46916253 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 199, 154 |
| Conread position: | 264-491 |
| Cow position: | chr21:21517987-21518210 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.