Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 65-496 |
| Cow position: | chr22:11031857-11032273 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 76-372 |
| Cow position: | chr22:44610023-44610298 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 80, 124 |
| Conread position: | 80-372 |
| Cow position: | chr22:2395923-2395632 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 85-289 |
| Cow position: | chr22:8740316-8740132 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 85-494 |
| Cow position: | chr22:1269667-1269272 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 85-495 |
| Cow position: | chr22:6503024-6502613 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 86-495 |
| Cow position: | chr22:35907271-35906871 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 109 |
| Conread position: | 86-496 |
| Cow position: | chr22:1322253-1322647 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 63 |
| Conread position: | 88-496 |
| Cow position: | chr22:23853788-23854180 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 100 |
| Conread position: | 97-496 |
| Cow position: | chr22:3306265-3305876 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 62 |
| Conread position: | 101-343 |
| Cow position: | chr22:1283186-1282947 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 119, 94 |
| Conread position: | 109-493 |
| Cow position: | chr22:37132577-37132942 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 86 |
| Conread position: | 110-352 |
| Cow position: | chr22:44476022-44476253 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 152, 78 |
| Conread position: | 113-487 |
| Cow position: | chr22:15956018-15955665 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 116-379 |
| Cow position: | chr22:46522378-46522118 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 83, 45 |
| Conread position: | 140-316 |
| Cow position: | chr22:41419208-41419030 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 148-494 |
| Cow position: | chr22:36269412-36269752 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 177-445 |
| Cow position: | chr22:8148266-8148003 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 214-495 |
| Cow position: | chr22:19143446-19143167 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 218-496 |
| Cow position: | chr22:34599651-34599919 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 220-496 |
| Cow position: | chr22:525445-525169 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 220-496 |
| Cow position: | chr22:560459-560183 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 243 |
| Conread position: | 224-365 |
| Cow position: | chr22:1860990-1861135 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 224-496 |
| Cow position: | chr22:326919-326648 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 226-395 |
| Cow position: | chr22:1522264-1522436 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-495 |
| Cow position: | chr22:44396695-44396967 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr22:15313699-15313431 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 86 |
| Conread position: | 226-496 |
| Cow position: | chr22:17328486-17328214 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 233 |
| Conread position: | 226-496 |
| Cow position: | chr22:18816133-18815860 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 243 |
| Conread position: | 226-496 |
| Cow position: | chr22:31313592-31313865 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr22:31334785-31334512 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr22:39469270-39468996 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 244 |
| Conread position: | 235-493 |
| Cow position: | chr22:44934242-44934499 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 0 |
| Conread position: | 237-496 |
| Cow position: | chr22:12731407-12731150 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 212, 21 |
| Conread position: | 240-496 |
| Cow position: | chr22:21589592-21589855 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 253-415 |
| Cow position: | chr22:44490162-44490324 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-465 |
| Cow position: | chr22:15851598-15851810 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 169, 208 |
| Conread position: | 253-494 |
| Cow position: | chr22:1879070-1879309 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 253-496 |
| Cow position: | chr22:537378-537618 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 253-496 |
| Cow position: | chr22:3278079-3277837 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 193 |
| Conread position: | 253-496 |
| Cow position: | chr22:5308384-5308626 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 253-496 |
| Cow position: | chr22:18027556-18027799 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 212 |
| Conread position: | 253-496 |
| Cow position: | chr22:27284308-27284550 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 253-496 |
| Cow position: | chr22:27309496-27309258 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 253-496 |
| Cow position: | chr22:36184040-36184275 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 199, 92 |
| Conread position: | 253-496 |
| Cow position: | chr22:44369348-44369108 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 192, 82 |
| Conread position: | 253-496 |
| Cow position: | chr22:48004817-48005062 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 132 |
| Conread position: | 257-496 |
| Cow position: | chr22:6020944-6021182 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 258-496 |
| Cow position: | chr22:5233000-5232763 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 259-496 |
| Cow position: | chr22:693906-694143 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 151, 207 |
| Conread position: | 259-496 |
| Cow position: | chr22:10909550-10909316 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 259-496 |
| Cow position: | chr22:16814169-16814405 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 259-496 |
| Cow position: | chr22:20240559-20240325 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 202, 75 |
| Conread position: | 262-496 |
| Cow position: | chr22:1520722-1520496 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
Show alignments to all cow chromosomes.