Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 69-490 |
| Cow position: | chr28:10647229-10646831 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 33 |
| Conread position: | 76-496 |
| Cow position: | chr28:10071457-10071852 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 80-494 |
| Cow position: | chr28:14913672-14914084 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 79, 164 |
| Conread position: | 83-279 |
| Cow position: | chr28:5764728-5764907 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 85-197 |
| Cow position: | chr28:11356887-11356774 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 85-496 |
| Cow position: | chr28:10497852-10497452 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 86-296 |
| Cow position: | chr28:24704401-24704609 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 134, 117 |
| Conread position: | 87-493 |
| Cow position: | chr28:5813182-5813576 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 20 |
| Conread position: | 88-398 |
| Cow position: | chr28:21359504-21359811 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 114 |
| Conread position: | 101-432 |
| Cow position: | chr28:10617638-10617322 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 89 |
| Conread position: | 102-348 |
| Cow position: | chr28:29092387-29092143 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 115, 92 |
| Conread position: | 105-348 |
| Cow position: | chr28:32330513-32330281 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 107-495 |
| Cow position: | chr28:2989049-2988674 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 40 |
| Conread position: | 115-445 |
| Cow position: | chr28:10230021-10229700 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 225, 72 |
| Conread position: | 115-491 |
| Cow position: | chr28:7789749-7789389 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 30 |
| Conread position: | 124-315 |
| Cow position: | chr28:14946845-14947026 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 144-496 |
| Cow position: | chr28:3020517-3020181 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 208-496 |
| Cow position: | chr28:22260870-22260581 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 217-496 |
| Cow position: | chr28:5114009-5113728 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 220-496 |
| Cow position: | chr28:10581693-10581415 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 248 |
| Conread position: | 220-496 |
| Cow position: | chr28:18520167-18519880 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 37, 192 |
| Conread position: | 223-496 |
| Cow position: | chr28:33252606-33252875 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 170 |
| Conread position: | 226-415 |
| Cow position: | chr28:14705374-14705181 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-487 |
| Cow position: | chr28:29820031-29820296 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 244 |
| Conread position: | 226-492 |
| Cow position: | chr28:12150601-12150869 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 226-496 |
| Cow position: | chr28:1505161-1505435 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 244 |
| Conread position: | 226-496 |
| Cow position: | chr28:1814570-1814299 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 149 |
| Conread position: | 226-496 |
| Cow position: | chr28:5566442-5566719 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 244 |
| Conread position: | 226-496 |
| Cow position: | chr28:5751408-5751139 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 199 |
| Conread position: | 226-496 |
| Cow position: | chr28:5937773-5938049 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 178 |
| Conread position: | 226-496 |
| Cow position: | chr28:13460267-13460537 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 226-496 |
| Cow position: | chr28:17388779-17389052 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 167 |
| Conread position: | 226-496 |
| Cow position: | chr28:17667000-17666729 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 226-496 |
| Cow position: | chr28:26425954-26425681 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr28:32792083-32791808 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 213 |
| Conread position: | 226-496 |
| Cow position: | chr28:34594276-34594548 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 123 |
| Conread position: | 227-496 |
| Cow position: | chr28:782693-782961 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 227-496 |
| Cow position: | chr28:7002288-7002559 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 148 |
| Conread position: | 232-496 |
| Cow position: | chr28:2083898-2084162 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 119 |
| Conread position: | 235-365 |
| Cow position: | chr28:7901669-7901803 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 235-496 |
| Cow position: | chr28:1167574-1167312 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 232 |
| Conread position: | 253-490 |
| Cow position: | chr28:22233078-22232842 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 258-496 |
| Cow position: | chr28:1953456-1953695 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 217, 207 |
| Conread position: | 258-496 |
| Cow position: | chr28:6780007-6779773 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 14 |
| Conread position: | 259-403 |
| Cow position: | chr28:30805360-30805216 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 122, 137 |
| Conread position: | 259-495 |
| Cow position: | chr28:485235-485000 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr28:6538934-6538698 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 259-496 |
| Cow position: | chr28:7822585-7822821 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr28:14750874-14751109 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 264-496 |
| Cow position: | chr28:2724590-2724359 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 276-496 |
| Cow position: | chr28:3191895-3191686 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.