Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 65-496 |
| Cow position: | chr29:802822-802394 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 34 |
| Conread position: | 85-496 |
| Cow position: | chr29:105160-105571 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 111 |
| Conread position: | 88-330 |
| Cow position: | chr29:9617424-9617663 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 127, 65 |
| Conread position: | 88-496 |
| Cow position: | chr29:14085992-14085600 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 108 |
| Conread position: | 101-487 |
| Cow position: | chr29:15949403-15949024 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 214-496 |
| Cow position: | chr29:25932281-25932008 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 220-496 |
| Cow position: | chr29:410267-409991 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 220-496 |
| Cow position: | chr29:2841115-2840841 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 220-496 |
| Cow position: | chr29:10647993-10647715 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 248 |
| Conread position: | 220-496 |
| Cow position: | chr29:38227236-38227515 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 221-493 |
| Cow position: | chr29:21426767-21426497 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 226-487 |
| Cow position: | chr29:19653371-19653629 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 127 |
| Conread position: | 226-495 |
| Cow position: | chr29:2100108-2100380 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 226-495 |
| Cow position: | chr29:16022793-16023067 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 245 |
| Conread position: | 226-495 |
| Cow position: | chr29:20251422-20251693 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 226-496 |
| Cow position: | chr29:2690163-2690436 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 257 |
| Conread position: | 226-496 |
| Cow position: | chr29:7430956-7430683 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr29:10823706-10823435 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 226-496 |
| Cow position: | chr29:23976103-23976370 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 226-496 |
| Cow position: | chr29:26164559-26164287 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 226-496 |
| Cow position: | chr29:32540073-32540344 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 126 |
| Conread position: | 226-496 |
| Cow position: | chr29:40502719-40502448 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 228-496 |
| Cow position: | chr29:39079447-39079176 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 170 |
| Conread position: | 233-372 |
| Cow position: | chr29:21543093-21542955 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 235-473 |
| Cow position: | chr29:42650538-42650779 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 234 |
| Conread position: | 235-496 |
| Cow position: | chr29:6266228-6265964 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 176 |
| Conread position: | 235-496 |
| Cow position: | chr29:42802398-42802662 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 234 |
| Conread position: | 235-496 |
| Cow position: | chr29:43322827-43323089 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 239-496 |
| Cow position: | chr29:45587088-45586832 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 240-491 |
| Cow position: | chr29:5957883-5958129 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 240-496 |
| Cow position: | chr29:34799532-34799274 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 228 |
| Conread position: | 245-404 |
| Cow position: | chr29:16770404-16770563 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 253-490 |
| Cow position: | chr29:19885357-19885591 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 253-496 |
| Cow position: | chr29:610325-610084 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 253-496 |
| Cow position: | chr29:31181702-31181933 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 257-495 |
| Cow position: | chr29:18856652-18856416 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 258-496 |
| Cow position: | chr29:35297161-35297399 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 208 |
| Conread position: | 259-496 |
| Cow position: | chr29:669764-669529 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 259-496 |
| Cow position: | chr29:7844624-7844860 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr29:15894557-15894321 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr29:15968568-15968332 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr29:16110709-16110944 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 259-496 |
| Cow position: | chr29:27250049-27249814 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 259-496 |
| Cow position: | chr29:34925772-34926007 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
Show alignments to all cow chromosomes.