Cow genome map
| Conread name: | rhea37_k16.y1 |
| Conread position: | 67-306 |
| Cow position: | chr7:67426507-67426735 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 73-300 |
| Cow position: | chr7:6488292-6488079 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 78-348 |
| Cow position: | chr7:3155290-3155554 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 85-390 |
| Cow position: | chr7:54644330-54644036 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 86-494 |
| Cow position: | chr7:58993770-58994170 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 81 |
| Conread position: | 88-480 |
| Cow position: | chr7:51014452-51014837 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 56 |
| Conread position: | 88-496 |
| Cow position: | chr7:29470634-29471035 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 145 |
| Conread position: | 89-496 |
| Cow position: | chr7:4415554-4415957 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 116 |
| Conread position: | 94-496 |
| Cow position: | chr7:68908509-68908901 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 69 |
| Conread position: | 97-389 |
| Cow position: | chr7:39107731-39107441 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 97-496 |
| Cow position: | chr7:48634630-48635015 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 47 |
| Conread position: | 101-403 |
| Cow position: | chr7:1734596-1734298 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 100 |
| Conread position: | 101-441 |
| Cow position: | chr7:27560368-27560042 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 102-492 |
| Cow position: | chr7:58377570-58377189 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 91 |
| Conread position: | 106-394 |
| Cow position: | chr7:55280127-55279861 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 110-495 |
| Cow position: | chr7:23836749-23837146 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 100, 45 |
| Conread position: | 111-324 |
| Cow position: | chr7:59137046-59137248 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 111-380 |
| Cow position: | chr7:63550109-63549841 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 121-492 |
| Cow position: | chr7:20305299-20304909 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 207 |
| Conread position: | 127-496 |
| Cow position: | chr7:21310725-21311064 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 52 |
| Conread position: | 160-453 |
| Cow position: | chr7:59683536-59683813 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 204-494 |
| Cow position: | chr7:1404313-1404026 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 220-493 |
| Cow position: | chr7:10431111-10430843 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 222-496 |
| Cow position: | chr7:45948844-45948568 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 187 |
| Conread position: | 223-454 |
| Cow position: | chr7:54603160-54603394 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 223-492 |
| Cow position: | chr7:446322-446053 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 224-496 |
| Cow position: | chr7:8144934-8144660 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 224-496 |
| Cow position: | chr7:21127353-21127080 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 226-494 |
| Cow position: | chr7:21234700-21234429 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr7:1372340-1372063 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 247 |
| Conread position: | 226-496 |
| Cow position: | chr7:13537272-13537001 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 149 |
| Conread position: | 226-496 |
| Cow position: | chr7:19924515-19924240 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 245 |
| Conread position: | 226-496 |
| Cow position: | chr7:21985711-21985986 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 245 |
| Conread position: | 226-496 |
| Cow position: | chr7:24808153-24807873 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 250 |
| Conread position: | 226-496 |
| Cow position: | chr7:33405930-33405657 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr7:34149410-34149683 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr7:34486226-34486499 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 243 |
| Conread position: | 226-496 |
| Cow position: | chr7:46901769-46901498 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 159 |
| Conread position: | 226-496 |
| Cow position: | chr7:55537606-55537338 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 124 |
| Conread position: | 226-496 |
| Cow position: | chr7:68232252-68232517 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 8, 95 |
| Conread position: | 233-473 |
| Cow position: | chr7:39792080-39792319 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 11 |
| Conread position: | 234-473 |
| Cow position: | chr7:65338947-65338719 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 122 |
| Conread position: | 235-496 |
| Cow position: | chr7:5662695-5662953 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 235-496 |
| Cow position: | chr7:14139279-14139016 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 231 |
| Conread position: | 235-496 |
| Cow position: | chr7:21929464-21929727 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 235-496 |
| Cow position: | chr7:27786942-27787213 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 234 |
| Conread position: | 235-496 |
| Cow position: | chr7:67799173-67799435 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 253-496 |
| Cow position: | chr7:25439846-25440088 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 253-496 |
| Cow position: | chr7:60463485-60463727 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 258-496 |
| Cow position: | chr7:3234342-3234109 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 258-496 |
| Cow position: | chr7:61559554-61559791 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 259-387 |
| Cow position: | chr7:6642535-6642407 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-444 |
| Cow position: | chr7:43830683-43830498 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-485 |
| Cow position: | chr7:20799104-20798880 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr7:16530-16295 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 259-496 |
| Cow position: | chr7:3300814-3300578 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr7:6648314-6648078 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr7:11446898-11447135 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 207 |
| Conread position: | 259-496 |
| Cow position: | chr7:20515430-20515194 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr7:21320498-21320734 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 259-496 |
| Cow position: | chr7:61808574-61808810 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 262-496 |
| Cow position: | chr7:38536749-38536982 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 264-496 |
| Cow position: | chr7:65811194-65811415 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 266-495 |
| Cow position: | chr7:54195428-54195212 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 141, 87 |
Show alignments to all cow chromosomes.