Cow genome map

Conread name: rhlv14b_h21.y1

Conread position: 40-299
Cow position: chr1:68253380-68253119 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 67, 33

Conread position: 43-299
Cow position: chr1:1981324-1981583 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 30

Conread position: 43-299
Cow position: chr1:71797114-71797367 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 73, 30

Conread position: 43-299
Cow position: chr1:80183953-80184211 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 30

Conread position: 44-293
Cow position: chr1:15311653-15311400 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 29

Conread position: 48-299
Cow position: chr1:32092146-32091890 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 25

Conread position: 48-299
Cow position: chr1:98534408-98534656 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 25

Conread position: 54-299
Cow position: chr1:51884641-51884390 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 52, 176

Conread position: 57-239
Cow position: chr1:71714752-71714563 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 24

Conread position: 65-299
Cow position: chr1:1028400-1028156 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 126

Conread position: 65-300
Cow position: chr1:1023035-1023280 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 126

Conread position: 66-272
Cow position: chr1:57853707-57853924 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 125

Conread position: 66-299
Cow position: chr1:9376348-9376590 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 125

Conread position: 66-299
Cow position: chr1:13404356-13404596 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 124

Conread position: 66-299
Cow position: chr1:44818775-44819016 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 166

Conread position: 66-299
Cow position: chr1:67006905-67006662 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr1:68821093-68821336 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr1:86597587-86597340 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr1:90392727-90392970 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 125

Conread position: 66-299
Cow position: chr1:96637810-96637568 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 147

Conread position: 66-299
Cow position: chr1:98618687-98618444 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 16, 168

Conread position: 66-299
Cow position: chr1:99398648-99398405 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 168

Conread position: 67-223
Cow position: chr1:98412711-98412553 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 87

Conread position: 67-281
Cow position: chr1:57760128-57759904 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 167

Conread position: 67-294
Cow position: chr1:24412983-24412751 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 162

Conread position: 67-298
Cow position: chr1:101634471-101634229 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 151

Conread position: 67-299
Cow position: chr1:54933964-54933716 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 167

Conread position: 67-299
Cow position: chr1:72813185-72812944 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 147

Conread position: 67-299
Cow position: chr1:74939967-74939732 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 39

Conread position: 67-299
Cow position: chr1:83136965-83136723 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 167

Conread position: 67-299
Cow position: chr1:89492210-89492452 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 167

Conread position: 67-299
Cow position: chr1:99136660-99136901 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 167

Conread position: 67-302
Cow position: chr1:54179442-54179198 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 166

Conread position: 69-299
Cow position: chr1:27309037-27309271 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 18

Conread position: 71-296
Cow position: chr1:10519515-10519286 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 23

Conread position: 72-299
Cow position: chr1:86578753-86578519 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 159

Conread position: 74-269
Cow position: chr1:29901230-29901429 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 27

Conread position: 75-299
Cow position: chr1:64941529-64941759 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 155

Conread position: 76-293
Cow position: chr1:99642611-99642825 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 85, 104

Conread position: 76-298
Cow position: chr1:67290625-67290401 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 152

Conread position: 77-284
Cow position: chr1:10119973-10119758 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 155

Conread position: 77-286
Cow position: chr1:80336492-80336700 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 155

Conread position: 77-298
Cow position: chr1:48735953-48735724 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:475897-475667 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 154

Conread position: 77-299
Cow position: chr1:831223-831453 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 112

Conread position: 77-299
Cow position: chr1:1382854-1383084 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:8345388-8345618 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:8402490-8402260 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:8513249-8513478 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 112

Conread position: 77-299
Cow position: chr1:8517052-8517282 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 155

Conread position: 77-299
Cow position: chr1:9593397-9593626 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 133

Conread position: 77-299
Cow position: chr1:11665522-11665752 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:12607735-12607962 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 109

Conread position: 77-299
Cow position: chr1:17056484-17056254 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:17058152-17058382 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:19235480-19235708 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 152

Conread position: 77-299
Cow position: chr1:23886275-23886505 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:23920283-23920053 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:34820949-34820719 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:40766770-40766540 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:47078163-47078393 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:47418464-47418234 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:51732309-51732539 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:53015824-53015594 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:53308634-53308869 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 184

Conread position: 77-299
Cow position: chr1:56667119-56666889 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:61282029-61281799 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:63760526-63760756 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:64818132-64818362 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:65021560-65021330 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:68097137-68097367 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:68144952-68145182 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:69513411-69513641 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:69872485-69872715 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:75403914-75403683 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:76207499-76207726 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 112

Conread position: 77-299
Cow position: chr1:76917087-76916857 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:78234668-78234898 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:84284722-84284492 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:89234014-89234244 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr1:89432423-89432192 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 156

Conread position: 77-299
Cow position: chr1:102815491-102815261 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 155

Conread position: 78-293
Cow position: chr1:82568710-82568489 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 111

Conread position: 78-299
Cow position: chr1:56619777-56620006 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 154

Conread position: 81-234
Cow position: chr1:22823691-22823531 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 148

Conread position: 81-235
Cow position: chr1:33825586-33825425 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 148

Conread position: 81-239
Cow position: chr1:35685902-35686070 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 150

Conread position: 81-239
Cow position: chr1:82504721-82504553 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 151

Conread position: 81-241
Cow position: chr1:12143168-12143335 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 148

Conread position: 81-241
Cow position: chr1:83185004-83184837 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 148

Conread position: 81-245
Cow position: chr1:10778328-10778154 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 151

Conread position: 81-265
Cow position: chr1:54258321-54258133 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 146

Conread position: 81-267
Cow position: chr1:57636841-57636646 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 150

Conread position: 81-285
Cow position: chr1:43380275-43380475 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 102

Conread position: 81-290
Cow position: chr1:44975499-44975278 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 178

Conread position: 81-290
Cow position: chr1:57155906-57156130 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 26, 158

Conread position: 81-293
Cow position: chr1:4374584-4374798 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 150

Conread position: 81-293
Cow position: chr1:21572797-21572578 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 150

Conread position: 81-293
Cow position: chr1:97231730-97231514 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 110

Conread position: 81-296
Cow position: chr1:95071462-95071237 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 26, 153

Conread position: 81-297
Cow position: chr1:13637913-13638133 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 146

Conread position: 81-297
Cow position: chr1:26702444-26702667 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 150

Conread position: 81-297
Cow position: chr1:68601618-68601839 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 136

Conread position: 81-297
Cow position: chr1:85361609-85361384 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 23, 153

Conread position: 81-297
Cow position: chr1:91799231-91799455 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 22, 150

Conread position: 81-298
Cow position: chr1:78091786-78091561 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr1:83732-83505 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr1:3440977-3440751 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 108

Conread position: 81-299
Cow position: chr1:3739753-3739528 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 149

Conread position: 81-299
Cow position: chr1:9526580-9526354 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 108

Conread position: 81-299
Cow position: chr1:11226491-11226717 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 118

Conread position: 81-299
Cow position: chr1:11873601-11873827 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 149

Conread position: 81-299
Cow position: chr1:12057240-12057465 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr1:13250533-13250759 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:21092845-21092620 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 150

Conread position: 81-299
Cow position: chr1:21257596-21257823 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:21420643-21420869 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:24235764-24235988 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 138

Conread position: 81-299
Cow position: chr1:25177990-25178216 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 150

Conread position: 81-299
Cow position: chr1:25282185-25282408 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:29916172-29915941 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 156

Conread position: 81-299
Cow position: chr1:30034300-30034079 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 102

Conread position: 81-299
Cow position: chr1:30372906-30372680 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 129

Conread position: 81-299
Cow position: chr1:31341300-31341527 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 153

Conread position: 81-299
Cow position: chr1:31662329-31662103 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:35785792-35785567 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr1:38688229-38688003 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr1:39687280-39687055 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:39835055-39834828 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 155

Conread position: 81-299
Cow position: chr1:40062202-40061973 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 153

Conread position: 81-299
Cow position: chr1:40310760-40310533 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 147

Conread position: 81-299
Cow position: chr1:41735871-41736085 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 129

Conread position: 81-299
Cow position: chr1:45007220-45006996 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 78

Conread position: 81-299
Cow position: chr1:46821766-46821538 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 158

Conread position: 81-299
Cow position: chr1:47634688-47634914 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:47653555-47653781 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr1:50670830-50670603 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr1:51366121-51365895 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:54199626-54199851 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr1:55163676-55163454 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 140

Conread position: 81-299
Cow position: chr1:56190404-56190630 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 139

Conread position: 81-299
Cow position: chr1:57889061-57888840 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 102

Conread position: 81-299
Cow position: chr1:63041845-63042071 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 151

Conread position: 81-299
Cow position: chr1:65480967-65480741 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:66491591-66491366 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr1:67008978-67009207 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 68

Conread position: 81-299
Cow position: chr1:68798668-68798897 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr1:68827224-68827450 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 150

Conread position: 81-299
Cow position: chr1:69941214-69941436 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 147

Conread position: 81-299
Cow position: chr1:71691568-71691342 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr1:73442866-73443095 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 154

Conread position: 81-299
Cow position: chr1:73756847-73756620 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 55

Conread position: 81-299
Cow position: chr1:75249989-75249765 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 150

Conread position: 81-299
Cow position: chr1:76419870-76419644 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 152

Conread position: 81-299
Cow position: chr1:76748380-76748606 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr1:78920995-78921220 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 108

Conread position: 81-299
Cow position: chr1:79002200-79002428 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 147

Conread position: 81-299
Cow position: chr1:79590854-79590626 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:81309376-81309150 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:82479998-82479772 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 131

Conread position: 81-299
Cow position: chr1:86372023-86372249 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:88298221-88297998 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 106

Conread position: 81-299
Cow position: chr1:90913838-90913616 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 143

Conread position: 81-299
Cow position: chr1:91903033-91902808 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 150

Conread position: 81-299
Cow position: chr1:94226794-94227019 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr1:94879068-94879294 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr1:95499741-95499973 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 153

Conread position: 81-299
Cow position: chr1:102289442-102289667 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 150

Conread position: 81-301
Cow position: chr1:66776688-66776463 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 23

Conread position: 81-304
Cow position: chr1:22628885-22629110 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 23, 92

Conread position: 81-306
Cow position: chr1:57305586-57305355 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 126

Conread position: 82-272
Cow position: chr1:61350900-61350710 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 99

Conread position: 82-293
Cow position: chr1:80421941-80421724 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 126

Conread position: 82-297
Cow position: chr1:68282547-68282327 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 151

Conread position: 82-299
Cow position: chr1:22295685-22295905 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 147

Conread position: 82-299
Cow position: chr1:25856417-25856191 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 152

Conread position: 82-299
Cow position: chr1:58066958-58067177 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 5

Conread position: 82-299
Cow position: chr1:59019526-59019302 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 139

Conread position: 82-300
Cow position: chr1:67577818-67577604 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 24, 73

Conread position: 83-299
Cow position: chr1:4026937-4026716 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 147

Conread position: 83-299
Cow position: chr1:44769359-44769587 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 151

Conread position: 83-299
Cow position: chr1:56225229-56225001 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 154

Conread position: 83-299
Cow position: chr1:57957106-57957330 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 98

Conread position: 83-299
Cow position: chr1:82162178-82162403 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 149

Conread position: 84-263
Cow position: chr1:25610753-25610938 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 147

Conread position: 84-299
Cow position: chr1:81363274-81363060 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 57, 13

Conread position: 85-207
Cow position: chr1:68862815-68862689 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 85-239
Cow position: chr1:78795005-78795167 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 145

Conread position: 85-297
Cow position: chr1:3930111-3930329 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 145

Conread position: 85-297
Cow position: chr1:85776453-85776671 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 145

Conread position: 85-298
Cow position: chr1:51980975-51980755 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 145

Conread position: 85-299
Cow position: chr1:14240058-14240279 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr1:16973104-16973326 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 22

Conread position: 85-299
Cow position: chr1:18196604-18196384 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 146

Conread position: 85-299
Cow position: chr1:24445979-24446196 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 140

Conread position: 85-299
Cow position: chr1:28877104-28876884 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr1:30531026-30531245 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 144

Conread position: 85-299
Cow position: chr1:33547391-33547611 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr1:52354667-52354885 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 144

Conread position: 85-299
Cow position: chr1:52372162-52371942 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 149

Conread position: 85-299
Cow position: chr1:52955966-52955748 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 31, 143

Conread position: 85-299
Cow position: chr1:53423201-53422977 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 149

Conread position: 85-299
Cow position: chr1:56140387-56140607 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 10

Conread position: 85-299
Cow position: chr1:62507236-62507456 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr1:63049574-63049354 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr1:72087593-72087372 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 144

Conread position: 85-299
Cow position: chr1:73995437-73995219 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 144

Conread position: 85-299
Cow position: chr1:81180238-81180453 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 145

Conread position: 85-299
Cow position: chr1:91888239-91888459 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr1:100537387-100537169 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 130

Conread position: 87-288
Cow position: chr1:68818064-68818275 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 145

Conread position: 87-297
Cow position: chr1:76095967-76095748 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 144

Conread position: 87-299
Cow position: chr1:3323601-3323382 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 144

Conread position: 87-299
Cow position: chr1:39100783-39100567 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 8

Conread position: 87-299
Cow position: chr1:52507616-52507833 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 143

Conread position: 87-299
Cow position: chr1:56129020-56129233 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 119

Conread position: 87-299
Cow position: chr1:60114774-60114558 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 8

Conread position: 87-299
Cow position: chr1:63601784-63601999 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 8

Conread position: 87-299
Cow position: chr1:65943216-65943431 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 9

Conread position: 87-299
Cow position: chr1:67821472-67821689 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 123

Conread position: 87-299
Cow position: chr1:76222947-76223163 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 8

Conread position: 87-299
Cow position: chr1:90621746-90621969 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 146

Conread position: 87-299
Cow position: chr1:92963138-92962912 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 150

Conread position: 87-299
Cow position: chr1:93527151-93526939 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 129

Conread position: 87-300
Cow position: chr1:22826914-22826694 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 144

Conread position: 88-293
Cow position: chr1:53579055-53578847 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 7

Conread position: 88-299
Cow position: chr1:42741026-42740811 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 7

Conread position: 88-299
Cow position: chr1:53040953-53041174 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 168

Conread position: 88-299
Cow position: chr1:53424937-53424715 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 148

Conread position: 88-299
Cow position: chr1:63260499-63260710 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 31

Conread position: 88-299
Cow position: chr1:76873887-76873666 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 143

Conread position: 89-237
Cow position: chr1:88029035-88028879 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 141

Conread position: 93-298
Cow position: chr1:68446062-68446270 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 134

Conread position: 95-296
Cow position: chr1:3556769-3556974 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 125

Conread position: 95-296
Cow position: chr1:56748303-56748098 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 135

Conread position: 95-299
Cow position: chr1:55357543-55357758 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 140

Conread position: 97-293
Cow position: chr1:89729308-89729516 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 138

Conread position: 100-299
Cow position: chr1:53369702-53369501 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 87

Conread position: 100-299
Cow position: chr1:91450247-91450040 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 132

Conread position: 101-299
Cow position: chr1:96184277-96184479 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 127

Conread position: 102-297
Cow position: chr1:68782929-68783129 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 124

Conread position: 102-299
Cow position: chr1:84786096-84786297 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 126

Conread position: 102-306
Cow position: chr1:523000-522795 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 34

Conread position: 102-306
Cow position: chr1:89342263-89342467 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 58, 122

Conread position: 104-297
Cow position: chr1:84556679-84556873 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 121

Conread position: 104-299
Cow position: chr1:7752136-7751935 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 125

Conread position: 104-299
Cow position: chr1:28516991-28517187 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 120

Conread position: 104-299
Cow position: chr1:78184431-78184235 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 121

Conread position: 106-301
Cow position: chr1:61735720-61735916 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 119

Conread position: 106-307
Cow position: chr1:19442561-19442358 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 119

Conread position: 107-299
Cow position: chr1:55585883-55586076 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 14

Conread position: 107-299
Cow position: chr1:76879013-76878819 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 118

Conread position: 107-299
Cow position: chr1:89089555-89089748 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 118

Conread position: 112-299
Cow position: chr1:40689422-40689236 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 115

Conread position: 115-269
Cow position: chr1:48605886-48605732 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 86

Conread position: 115-295
Cow position: chr1:57969358-57969545 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 116

Conread position: 115-297
Cow position: chr1:95176648-95176465 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 77

Conread position: 115-299
Cow position: chr1:1348851-1349035 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 110

Conread position: 115-299
Cow position: chr1:7747959-7747769 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 114

Conread position: 116-299
Cow position: chr1:12374331-12374515 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 109

Conread position: 116-299
Cow position: chr1:68951355-68951171 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 109

Conread position: 117-299
Cow position: chr1:47791104-47791287 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 43, 80

Conread position: 117-299
Cow position: chr1:48346140-48345957 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 108

Conread position: 117-299
Cow position: chr1:78558399-78558216 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 108

Conread position: 118-299
Cow position: chr1:61240659-61240472 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 58

Conread position: 128-293
Cow position: chr1:55327275-55327443 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 102

Conread position: 137-299
Cow position: chr1:34685888-34685728 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 86

Conread position: 296-627
Cow position: chr1:67974723-67975037 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 32

Conread position: 298-627
Cow position: chr1:71135397-71135071 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 54

Conread position: 299-627
Cow position: chr1:79113907-79113587 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 34

Conread position: 301-619
Cow position: chr1:6240787-6241097 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 53

Conread position: 301-619
Cow position: chr1:46839273-46838965 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 53

Conread position: 301-619
Cow position: chr1:56746378-56746051 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 301-619
Cow position: chr1:99628591-99628882 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 27

Conread position: 301-625
Cow position: chr1:58528764-58528441 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 188

Conread position: 301-627
Cow position: chr1:8470668-8470995 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 290

Conread position: 301-627
Cow position: chr1:10726117-10725791 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 289

Conread position: 301-627
Cow position: chr1:15149149-15149476 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr1:18087923-18087596 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr1:20543722-20543393 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 291

Conread position: 301-627
Cow position: chr1:21678285-21677967 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 130

Conread position: 301-627
Cow position: chr1:31351275-31351599 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 212

Conread position: 301-627
Cow position: chr1:33854761-33854434 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr1:55273548-55273875 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 290

Conread position: 301-627
Cow position: chr1:57120345-57120664 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 301-627
Cow position: chr1:69503880-69504207 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr1:70534970-70535296 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 289

Conread position: 301-627
Cow position: chr1:73440460-73440133 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr1:75403388-75403061 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr1:80564583-80564910 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr1:101833889-101833565 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 69

Conread position: 301-629
Cow position: chr1:82369910-82369585 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 209

Conread position: 301-629
Cow position: chr1:95474408-95474735 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 229

Conread position: 302-629
Cow position: chr1:69406651-69406323 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 287

Conread position: 303-618
Cow position: chr1:77657041-77656722 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 49

Conread position: 304-596
Cow position: chr1:99865408-99865116 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 157

Conread position: 311-621
Cow position: chr1:49132689-49132999 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 280

Conread position: 311-627
Cow position: chr1:88563433-88563744 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 58

Conread position: 314-627
Cow position: chr1:31190950-31191257 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 22

Conread position: 370-627
Cow position: chr1:60342479-60342224 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 219

Conread position: 374-627
Cow position: chr1:23040509-23040262 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 110

Conread position: 377-627
Cow position: chr1:62732221-62731967 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 399-627
Cow position: chr1:9377085-9377312 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 422-619
Cow position: chr1:76701301-76701491 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 160
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 7, 61

Conread position: 433-627
Cow position: chr1:31498479-31498287 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 114, 146

Conread position: 453-627
Cow position: chr1:22778550-22778717 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 58

Conread position: 478-627
Cow position: chr1:90865350-90865200 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 133

Conread position: 484-627
Cow position: chr1:59202955-59203096 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 134, 101

Conread position: 518-627
Cow position: chr1:11018709-11018602 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 101, 70

Show alignments to all cow chromosomes.