Cow genome map


           Conread name:
           rhlv14b_h21.y1
        

               Conread position:
               28-299
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               50, 169
               

               Conread position:
               43-299
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               46-295
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 188
               

               Conread position:
               49-285
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 183
               

               Conread position:
               58-299
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 136
               

               Conread position:
               66-299
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               12, 166
               

               Conread position:
               66-299
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 168
               

               Conread position:
               66-299
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 168
               

               Conread position:
               67-299
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 167
               

               Conread position:
               67-299
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               11, 103
               

               Conread position:
               67-305
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 164
               

               Conread position:
               76-299
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               77-266
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 154
               

               Conread position:
               77-298
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               41, 113
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 93
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 131
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               77-299
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 156
               

               Conread position:
               77-300
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               27, 130
               

               Conread position:
               81-236
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 151
               

               Conread position:
               81-241
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               81-285
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 118
               

               Conread position:
               81-290
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               81-290
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 147
               

               Conread position:
               81-292
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               81-298
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               12, 151
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 151
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 151
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               24, 142
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 151
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 117
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               35, 148
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 151
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 152
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               22, 103
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               26, 151
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 148
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 150
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               81-300
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               81-310
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               82-299
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               82-299
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               25, 155
               

               Conread position:
               82-299
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               34, 147
               

               Conread position:
               82-299
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 149
               

               Conread position:
               83-272
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               85-233
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               85-291
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               33, 142
               

               Conread position:
               85-298
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               85-299
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               85-299
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 144
               

               Conread position:
               85-299
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 145
               

               Conread position:
               85-299
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               87-299
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               87-299
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               87-299
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               87-299
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 142
               

               Conread position:
               87-300
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               88-299
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 167
               

               Conread position:
               88-299
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 7
               

               Conread position:
               89-297
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               27, 168
               

               Conread position:
               91-299
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               91-299
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               21, 138
               

               Conread position:
               95-268
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 135
               

               Conread position:
               95-299
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               21, 134
               

               Conread position:
               96-297
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               99-300
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 129
               

               Conread position:
               101-296
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               102-297
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               103-298
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               104-297
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 149
               

               Conread position:
               116-297
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 109
               

               Conread position:
               127-299
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               299-619
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 56
               

               Conread position:
               301-627
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 53
               

               Conread position:
               301-627
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 290
               

               Conread position:
               301-627
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 290
               

               Conread position:
               301-628
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 241
               

               Conread position:
               302-627
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 289
               

               Conread position:
               303-627
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 298
               

               Conread position:
               304-627
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 186
               

               Conread position:
               304-627
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 210
               

               Conread position:
               316-627
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 115
               

               Conread position:
               320-628
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 131
               

               Conread position:
               426-627
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               193, 49
               

               Conread position:
               511-627
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               107, 77
               

               Conread position:
               532-627
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 56
               
Show alignments to all cow chromosomes.