Cow genome map

Conread name: rhlv14b_h21.y1

Conread position: 28-299
Cow position: chr19:7473168-7472891 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 169

Conread position: 43-299
Cow position: chr19:20671133-20671394 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 58, 30

Conread position: 46-295
Cow position: chr19:48478734-48478474 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 188

Conread position: 49-285
Cow position: chr19:31873876-31873631 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 183

Conread position: 58-299
Cow position: chr19:14179913-14180159 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 136

Conread position: 66-299
Cow position: chr19:1168840-1169080 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 166

Conread position: 66-299
Cow position: chr19:2306711-2306954 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr19:30540308-30540551 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 168

Conread position: 67-299
Cow position: chr19:8030-7789 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 167

Conread position: 67-299
Cow position: chr19:4448286-4448053 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 103

Conread position: 67-305
Cow position: chr19:3246282-3246531 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 164

Conread position: 76-299
Cow position: chr19:25655644-25655874 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 131

Conread position: 77-266
Cow position: chr19:24062037-24061839 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 154

Conread position: 77-298
Cow position: chr19:46181075-46181296 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 113

Conread position: 77-299
Cow position: chr19:1582147-1582377 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 155

Conread position: 77-299
Cow position: chr19:3106260-3106491 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr19:5679579-5679809 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr19:5731426-5731196 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr19:5733551-5733333 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 93

Conread position: 77-299
Cow position: chr19:5887329-5887559 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr19:6532531-6532301 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr19:10614297-10614067 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 131

Conread position: 77-299
Cow position: chr19:30514970-30515200 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr19:33118652-33118882 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr19:34283063-34282846 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 59

Conread position: 77-299
Cow position: chr19:35082301-35082071 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr19:44144168-44144399 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 156

Conread position: 77-300
Cow position: chr19:34955957-34956187 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 27, 130

Conread position: 81-236
Cow position: chr19:15068257-15068422 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 151

Conread position: 81-241
Cow position: chr19:12233888-12233718 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 149

Conread position: 81-267
Cow position: chr19:30232469-30232286 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 37

Conread position: 81-285
Cow position: chr19:4195465-4195257 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 118

Conread position: 81-290
Cow position: chr19:777584-777367 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 151

Conread position: 81-290
Cow position: chr19:35288002-35288221 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 147

Conread position: 81-292
Cow position: chr19:32177974-32178192 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 6

Conread position: 81-298
Cow position: chr19:51393474-51393249 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 151

Conread position: 81-299
Cow position: chr19:42404-42178 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr19:729994-730221 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr19:1580844-1581063 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 93

Conread position: 81-299
Cow position: chr19:1901265-1901494 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 142

Conread position: 81-299
Cow position: chr19:5043636-5043857 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 151

Conread position: 81-299
Cow position: chr19:7543158-7542934 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 117

Conread position: 81-299
Cow position: chr19:12698060-12697837 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 148

Conread position: 81-299
Cow position: chr19:14623845-14624071 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr19:21380189-21380416 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 152

Conread position: 81-299
Cow position: chr19:30237771-30237546 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 103

Conread position: 81-299
Cow position: chr19:36221672-36221446 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr19:36722068-36721845 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 148

Conread position: 81-299
Cow position: chr19:39056981-39056754 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 23, 151

Conread position: 81-299
Cow position: chr19:39338802-39339027 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 150

Conread position: 81-299
Cow position: chr19:39697809-39697584 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 150

Conread position: 81-299
Cow position: chr19:40439658-40439430 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 153

Conread position: 81-299
Cow position: chr19:41139668-41139895 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 152

Conread position: 81-300
Cow position: chr19:8205951-8206179 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 151

Conread position: 81-310
Cow position: chr19:39623049-39623292 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 26

Conread position: 82-299
Cow position: chr19:729534-729309 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 149

Conread position: 82-299
Cow position: chr19:14573105-14572876 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 155

Conread position: 82-299
Cow position: chr19:24927873-24928095 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 147

Conread position: 82-299
Cow position: chr19:25146848-25147081 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 149

Conread position: 83-272
Cow position: chr19:44571861-44571664 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 14

Conread position: 85-233
Cow position: chr19:34911384-34911229 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 145

Conread position: 85-291
Cow position: chr19:9583033-9582824 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 33, 142

Conread position: 85-298
Cow position: chr19:3858364-3858570 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 33

Conread position: 85-299
Cow position: chr19:9293992-9293768 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 9

Conread position: 85-299
Cow position: chr19:11376705-11376924 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 144

Conread position: 85-299
Cow position: chr19:27095861-27095641 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr19:39181479-39181697 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 102

Conread position: 87-299
Cow position: chr19:34971079-34970864 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 8

Conread position: 87-299
Cow position: chr19:37562283-37562494 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 25

Conread position: 87-299
Cow position: chr19:39661816-39662034 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 14, 47

Conread position: 87-299
Cow position: chr19:55210749-55210966 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 142

Conread position: 87-300
Cow position: chr19:34905269-34905484 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 8

Conread position: 88-299
Cow position: chr19:9704131-9704350 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 167

Conread position: 88-299
Cow position: chr19:15766829-15766619 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 7

Conread position: 89-297
Cow position: chr19:44489095-44488878 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 27, 168

Conread position: 91-299
Cow position: chr19:29627644-29627862 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 45

Conread position: 91-299
Cow position: chr19:35142603-35142815 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 138

Conread position: 95-268
Cow position: chr19:56150338-56150517 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 135

Conread position: 95-299
Cow position: chr19:36844945-36844734 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 21, 134

Conread position: 96-297
Cow position: chr19:2138387-2138581 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 68

Conread position: 99-300
Cow position: chr19:47557852-47557645 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 19, 129

Conread position: 101-296
Cow position: chr19:47968998-47968805 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 7

Conread position: 102-297
Cow position: chr19:5434342-5434537 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 127

Conread position: 103-298
Cow position: chr19:7637511-7637710 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 93

Conread position: 104-297
Cow position: chr19:35064506-35064705 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 149

Conread position: 116-297
Cow position: chr19:31846916-31847097 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 109

Conread position: 127-299
Cow position: chr19:42694695-42694522 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 98

Conread position: 299-619
Cow position: chr19:42647831-42648156 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 56

Conread position: 301-627
Cow position: chr19:2019222-2019538 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 53

Conread position: 301-627
Cow position: chr19:33528394-33528067 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr19:40848942-40849269 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 290

Conread position: 301-628
Cow position: chr19:33625119-33624799 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 241

Conread position: 302-627
Cow position: chr19:43149127-43148801 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 289

Conread position: 303-627
Cow position: chr19:30937675-30938008 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 298

Conread position: 304-627
Cow position: chr19:444394-444714 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 186

Conread position: 304-627
Cow position: chr19:32140541-32140223 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 210

Conread position: 316-627
Cow position: chr19:33648792-33649096 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 320-628
Cow position: chr19:48478090-48477794 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 131

Conread position: 426-627
Cow position: chr19:47189028-47189225 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 193, 49

Conread position: 511-627
Cow position: chr19:15070645-15070531 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 77

Conread position: 532-627
Cow position: chr19:6555284-6555191 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 56

Show alignments to all cow chromosomes.