Cow genome map

Conread name: rhlv14b_h21.y1

Conread position: 33-299
Cow position: chr20:35170113-35169849 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 11

Conread position: 35-299
Cow position: chr20:5939147-5939412 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 45

Conread position: 39-299
Cow position: chr20:20471553-20471283 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 198

Conread position: 40-299
Cow position: chr20:34107801-34107523 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 208

Conread position: 43-299
Cow position: chr20:32866524-32866781 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 32

Conread position: 43-299
Cow position: chr20:33363342-33363079 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 32

Conread position: 44-299
Cow position: chr20:4950600-4950856 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 7

Conread position: 44-299
Cow position: chr20:30480176-30479914 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 34

Conread position: 46-297
Cow position: chr20:8429564-8429317 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 69, 27

Conread position: 50-299
Cow position: chr20:8578064-8577812 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 46

Conread position: 66-297
Cow position: chr20:9014541-9014782 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 167

Conread position: 66-299
Cow position: chr20:16407482-16407248 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 114

Conread position: 66-299
Cow position: chr20:18651656-18651413 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 168

Conread position: 66-299
Cow position: chr20:30736591-30736834 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 168

Conread position: 66-305
Cow position: chr20:37153919-37154168 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 168

Conread position: 67-298
Cow position: chr20:5539192-5538950 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 164

Conread position: 67-299
Cow position: chr20:28283124-28282882 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 167

Conread position: 67-300
Cow position: chr20:13505535-13505778 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 167

Conread position: 69-297
Cow position: chr20:18169185-18168947 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 165

Conread position: 75-236
Cow position: chr20:20967150-20966982 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 154

Conread position: 77-267
Cow position: chr20:24388717-24388518 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 155

Conread position: 77-297
Cow position: chr20:14926440-14926213 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 143

Conread position: 77-299
Cow position: chr20:326554-326327 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 152

Conread position: 77-299
Cow position: chr20:774436-774666 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:1761828-1761598 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:3745417-3745187 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:4746168-4746398 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 112

Conread position: 77-299
Cow position: chr20:5502706-5502936 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:9994316-9994086 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:10100158-10099928 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:14436590-14436360 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:17864159-17863929 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:22060143-22060373 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:25122202-25122432 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:26597868-26597638 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:26737415-26737645 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:28246387-28246617 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:28324510-28324283 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 23

Conread position: 77-299
Cow position: chr20:29308000-29308230 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:33021710-33021480 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:33994220-33994450 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:35073416-35073186 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:36310468-36310698 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:36854776-36854546 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:38956043-38956273 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr20:41975843-41975613 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 155

Conread position: 77-300
Cow position: chr20:37439424-37439193 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-302
Cow position: chr20:33810904-33810671 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 155

Conread position: 81-228
Cow position: chr20:19313276-19313432 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 5, 150

Conread position: 81-234
Cow position: chr20:5702535-5702375 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 148

Conread position: 81-236
Cow position: chr20:33170084-33170246 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 148

Conread position: 81-241
Cow position: chr20:10859575-10859745 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 139

Conread position: 81-241
Cow position: chr20:11176457-11176627 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 150

Conread position: 81-246
Cow position: chr20:3034884-3034718 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 89

Conread position: 81-269
Cow position: chr20:9536924-9536730 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 148

Conread position: 81-277
Cow position: chr20:36779940-36780149 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 156

Conread position: 81-283
Cow position: chr20:34001606-34001809 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 144

Conread position: 81-290
Cow position: chr20:8870294-8870511 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 151

Conread position: 81-290
Cow position: chr20:38935422-38935635 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 54

Conread position: 81-296
Cow position: chr20:6549681-6549901 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 146

Conread position: 81-297
Cow position: chr20:6096695-6096917 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 149

Conread position: 81-298
Cow position: chr20:10146497-10146271 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 151

Conread position: 81-298
Cow position: chr20:26076875-26076647 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 147

Conread position: 81-299
Cow position: chr20:4756035-4756258 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 105

Conread position: 81-299
Cow position: chr20:6238857-6239084 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr20:6501589-6501366 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 149

Conread position: 81-299
Cow position: chr20:7806772-7806998 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr20:8246959-8247185 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr20:9433392-9433176 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 105

Conread position: 81-299
Cow position: chr20:9473824-9474049 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 150

Conread position: 81-299
Cow position: chr20:10919525-10919751 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr20:11614253-11614479 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr20:12996219-12996450 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 161

Conread position: 81-299
Cow position: chr20:13326122-13325901 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 146

Conread position: 81-299
Cow position: chr20:14756277-14756505 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 152

Conread position: 81-299
Cow position: chr20:18222788-18223014 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr20:20353124-20353350 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 151

Conread position: 81-299
Cow position: chr20:24902826-24903051 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 100

Conread position: 81-299
Cow position: chr20:26825837-26826058 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 21

Conread position: 81-299
Cow position: chr20:30689902-30689676 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 151

Conread position: 81-299
Cow position: chr20:31261523-31261303 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 103

Conread position: 81-299
Cow position: chr20:31784282-31784508 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr20:34458243-34458469 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr20:34969031-34968805 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr20:36424512-36424286 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr20:38001509-38001283 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr20:39875501-39875726 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 138

Conread position: 81-302
Cow position: chr20:15078869-15079098 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 151

Conread position: 81-308
Cow position: chr20:11350724-11350492 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 27, 151

Conread position: 82-236
Cow position: chr20:3658908-3659075 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 152

Conread position: 82-297
Cow position: chr20:23792393-23792168 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 180

Conread position: 82-299
Cow position: chr20:4945456-4945680 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 26, 150

Conread position: 82-299
Cow position: chr20:25658000-25658224 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 150

Conread position: 82-299
Cow position: chr20:35145796-35145571 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 150

Conread position: 82-310
Cow position: chr20:10497411-10497647 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 150

Conread position: 83-298
Cow position: chr20:9411369-9411151 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 143

Conread position: 83-299
Cow position: chr20:13493526-13493300 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 150

Conread position: 83-299
Cow position: chr20:17733985-17734211 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 152

Conread position: 83-299
Cow position: chr20:28441059-28440836 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 149

Conread position: 84-293
Cow position: chr20:21959268-21959485 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 148

Conread position: 85-290
Cow position: chr20:14735439-14735228 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 145

Conread position: 85-293
Cow position: chr20:17889304-17889516 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 133

Conread position: 85-297
Cow position: chr20:7710423-7710643 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 145

Conread position: 85-298
Cow position: chr20:12567304-12567521 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 144

Conread position: 85-299
Cow position: chr20:4621557-4621772 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 144

Conread position: 85-299
Cow position: chr20:4788452-4788670 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 29, 143

Conread position: 85-299
Cow position: chr20:4895109-4895336 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 154

Conread position: 85-299
Cow position: chr20:5958120-5958340 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 145

Conread position: 85-299
Cow position: chr20:8482422-8482639 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 142

Conread position: 85-299
Cow position: chr20:9267337-9267563 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 151

Conread position: 85-299
Cow position: chr20:9701334-9701114 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr20:13766907-13766687 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr20:15296044-15295823 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 10

Conread position: 85-299
Cow position: chr20:23803175-23802955 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 146

Conread position: 85-299
Cow position: chr20:25844283-25844503 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr20:35970727-35970509 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 52

Conread position: 86-299
Cow position: chr20:6423749-6423538 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 129

Conread position: 87-291
Cow position: chr20:7527575-7527792 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 173

Conread position: 87-299
Cow position: chr20:4893130-4893348 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 144

Conread position: 87-299
Cow position: chr20:8910690-8910470 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 146

Conread position: 87-299
Cow position: chr20:10539101-10538886 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 8

Conread position: 87-299
Cow position: chr20:14759926-14760150 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 149

Conread position: 87-299
Cow position: chr20:17657221-17657428 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 8

Conread position: 87-299
Cow position: chr20:19653522-19653738 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 8

Conread position: 87-299
Cow position: chr20:27339845-27339628 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 143

Conread position: 87-299
Cow position: chr20:27877504-27877288 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 142

Conread position: 87-300
Cow position: chr20:19441938-19441721 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 8

Conread position: 91-296
Cow position: chr20:22027803-22027596 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 135

Conread position: 92-299
Cow position: chr20:22850896-22850680 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 49

Conread position: 95-237
Cow position: chr20:33176969-33176824 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 130

Conread position: 95-297
Cow position: chr20:12839831-12839623 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 134

Conread position: 95-299
Cow position: chr20:10913561-10913770 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 134

Conread position: 95-299
Cow position: chr20:28443338-28443547 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 91

Conread position: 99-297
Cow position: chr20:20983794-20983596 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 129

Conread position: 99-298
Cow position: chr20:17820435-17820639 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 129

Conread position: 101-293
Cow position: chr20:34900589-34900388 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 18, 131

Conread position: 102-293
Cow position: chr20:3599630-3599828 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 128

Conread position: 102-297
Cow position: chr20:5181667-5181466 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 123

Conread position: 102-298
Cow position: chr20:17582573-17582375 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 13, 127

Conread position: 102-299
Cow position: chr20:5104668-5104870 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 16, 127

Conread position: 102-299
Cow position: chr20:30817297-30817100 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 14

Conread position: 106-288
Cow position: chr20:19017284-19017465 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 82

Conread position: 107-293
Cow position: chr20:19410608-19410793 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 118

Conread position: 115-275
Cow position: chr20:2486992-2486829 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 111

Conread position: 115-299
Cow position: chr20:22007205-22007020 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 110

Conread position: 115-299
Cow position: chr20:28067641-28067824 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 9

Conread position: 118-299
Cow position: chr20:7442398-7442589 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 115

Conread position: 118-299
Cow position: chr20:14326632-14326819 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 107

Conread position: 121-299
Cow position: chr20:26469335-26469512 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 104

Conread position: 126-299
Cow position: chr20:10200105-10199929 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 99

Conread position: 144-299
Cow position: chr20:12783391-12783235 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 81

Conread position: 151-299
Cow position: chr20:4668656-4668506 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 74

Conread position: 301-619
Cow position: chr20:7512426-7512743 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 93

Conread position: 301-627
Cow position: chr20:9589288-9588959 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 225

Conread position: 301-627
Cow position: chr20:9997046-9996717 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 292

Conread position: 301-627
Cow position: chr20:10494700-10494382 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 301-627
Cow position: chr20:12567810-12568133 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 81

Conread position: 301-627
Cow position: chr20:14512205-14511879 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 292

Conread position: 301-627
Cow position: chr20:22209131-22208804 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 288

Conread position: 301-627
Cow position: chr20:31220780-31220481 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 112, 25

Conread position: 301-627
Cow position: chr20:31846319-31846643 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 301-629
Cow position: chr20:30479619-30479289 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 291

Conread position: 303-627
Cow position: chr20:8445920-8445596 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 246

Conread position: 303-627
Cow position: chr20:9707631-9707947 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 56

Conread position: 329-627
Cow position: chr20:14672818-14672525 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 158

Conread position: 343-619
Cow position: chr20:28887842-28887564 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 250

Conread position: 370-627
Cow position: chr20:33181055-33181315 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 215

Conread position: 410-628
Cow position: chr20:12996868-12997078 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 412-627
Cow position: chr20:25845231-25845440 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 10

Conread position: 414-627
Cow position: chr20:32639406-32639193 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 15, 176

Conread position: 415-627
Cow position: chr20:30737668-30737457 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 174

Conread position: 420-627
Cow position: chr20:16944880-16944682 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 9, 40

Conread position: 426-629
Cow position: chr20:28246870-28247069 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 192, 14

Conread position: 455-627
Cow position: chr20:13575366-13575531 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 164, 19

Conread position: 462-627
Cow position: chr20:28034518-28034681 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 116

Show alignments to all cow chromosomes.