Cow genome map
| Conread name: | rhlv14b_h21.y1 | 
| Conread position: | 13-299 | 
| Cow position: | chr3:29596165-29595870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 31, 220 | 
| Conread position: | 33-299 | 
| Cow position: | chr3:38698314-38698038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 23, 199 | 
| Conread position: | 36-269 | 
| Cow position: | chr3:76000030-76000263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 80, 35 | 
| Conread position: | 40-268 | 
| Cow position: | chr3:54434732-54434501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 76, 9 | 
| Conread position: | 45-299 | 
| Cow position: | chr3:25062582-25062319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 52, 28 | 
| Conread position: | 48-299 | 
| Cow position: | chr3:3553302-3553054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 49, 26 | 
| Conread position: | 48-299 | 
| Cow position: | chr3:31078441-31078697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 59, 26 | 
| Conread position: | 48-299 | 
| Cow position: | chr3:80444584-80444840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 53, 38 | 
| Conread position: | 51-299 | 
| Cow position: | chr3:61191166-61191418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 19, 12 | 
| Conread position: | 53-297 | 
| Cow position: | chr3:43528491-43528737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 63, 22 | 
| Conread position: | 53-299 | 
| Cow position: | chr3:14626404-14626657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 66, 20 | 
| Conread position: | 61-298 | 
| Cow position: | chr3:72668442-72668684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 42, 8 | 
| Conread position: | 63-299 | 
| Cow position: | chr3:75157455-75157693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 44, 11 | 
| Conread position: | 66-280 | 
| Cow position: | chr3:19234683-19234459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-290 | 
| Cow position: | chr3:59342083-59341849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-293 | 
| Cow position: | chr3:13361356-13361119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-297 | 
| Cow position: | chr3:25690526-25690295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 42, 12 | 
| Conread position: | 66-297 | 
| Cow position: | chr3:32619102-32619344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 12, 169 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:303131-302888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:580089-579846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:1034997-1034754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 12, 169 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:6754594-6754351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:7245199-7245442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:12797151-12797395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:13512996-13513236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 12, 164 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:15687780-15688022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 169 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:19797193-19797437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:20378819-20379053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 12, 25 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:35613052-35612809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:36122084-36121842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 12, 125 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:37972928-37972693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 103 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:51256848-51256605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:53879356-53879599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 12, 168 | 
| Conread position: | 66-299 | 
| Cow position: | chr3:78472082-78472324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 12, 167 | 
| Conread position: | 67-293 | 
| Cow position: | chr3:81102240-81102006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 11, 124 | 
| Conread position: | 67-297 | 
| Cow position: | chr3:19711575-19711815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 11, 167 | 
| Conread position: | 67-299 | 
| Cow position: | chr3:5988654-5988896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 15, 124 | 
| Conread position: | 67-299 | 
| Cow position: | chr3:28675729-28675487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 11, 167 | 
| Conread position: | 67-299 | 
| Cow position: | chr3:30179822-30179581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 15, 164 | 
| Conread position: | 67-299 | 
| Cow position: | chr3:46856472-46856713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 11, 166 | 
| Conread position: | 67-299 | 
| Cow position: | chr3:69750961-69751203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 11, 166 | 
| Conread position: | 67-300 | 
| Cow position: | chr3:48073282-48073515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 11, 159 | 
| Conread position: | 77-289 | 
| Cow position: | chr3:69486433-69486213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-290 | 
| Cow position: | chr3:46007843-46007627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 9, 150 | 
| Conread position: | 77-297 | 
| Cow position: | chr3:17263095-17263324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 31, 112 | 
| Conread position: | 77-298 | 
| Cow position: | chr3:29560189-29560418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 31, 112 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:1622997-1622767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:2075677-2075447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:2573424-2573194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:3596014-3596244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:4135090-4135313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 31, 100 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:7280554-7280324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 26, 133 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:7767810-7767580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:12932663-12932433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:14144684-14144914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:14680978-14680748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:15233266-15233496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 30, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:16226769-16226541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 31, 112 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:20388574-20388804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:20796189-20795959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:20843673-20843903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:21594178-21593948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 31, 156 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:28933800-28933570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 30, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:32411670-32411900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 31, 112 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:34819492-34819722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:35044056-35043826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:47077716-47077946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:48811257-48811488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 31, 154 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:49287058-49286828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:49930349-49930579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 31, 142 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:50217885-50217655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:52149388-52149618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:54573042-54573272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 31, 156 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:55837738-55837508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:56298275-56298051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 31, 112 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:56484358-56484588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 33, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:69273792-69273562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:81064321-81064091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 31, 155 | 
| Conread position: | 77-299 | 
| Cow position: | chr3:81374355-81374585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 26, 155 | 
| Conread position: | 78-289 | 
| Cow position: | chr3:23277818-23278036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 38, 151 | 
| Conread position: | 78-299 | 
| Cow position: | chr3:32769707-32769477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 30, 154 | 
| Conread position: | 80-299 | 
| Cow position: | chr3:76923420-76923643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 16, 149 | 
| Conread position: | 81-234 | 
| Cow position: | chr3:31056278-31056441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-236 | 
| Cow position: | chr3:37599692-37599857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 81-241 | 
| Cow position: | chr3:25057876-25057709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 38, 147 | 
| Conread position: | 81-244 | 
| Cow position: | chr3:55117248-55117417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 23, 18 | 
| Conread position: | 81-277 | 
| Cow position: | chr3:2674753-2674549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-277 | 
| Cow position: | chr3:20129665-20129463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 26, 38 | 
| Conread position: | 81-280 | 
| Cow position: | chr3:6403021-6402815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-284 | 
| Cow position: | chr3:48242038-48242249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-292 | 
| Cow position: | chr3:35299398-35299180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 26, 150 | 
| Conread position: | 81-293 | 
| Cow position: | chr3:15685186-15685402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 26, 108 | 
| Conread position: | 81-293 | 
| Cow position: | chr3:17899544-17899322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 33, 176 | 
| Conread position: | 81-293 | 
| Cow position: | chr3:59514835-59514626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 78, 45 | 
| Conread position: | 81-297 | 
| Cow position: | chr3:17331492-17331268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 10, 151 | 
| Conread position: | 81-297 | 
| Cow position: | chr3:27242795-27243015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 22, 148 | 
| Conread position: | 81-297 | 
| Cow position: | chr3:29887700-29887918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 23, 151 | 
| Conread position: | 81-297 | 
| Cow position: | chr3:49218583-49218808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 26, 153 | 
| Conread position: | 81-297 | 
| Cow position: | chr3:49610323-49610547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 81-298 | 
| Cow position: | chr3:22908110-22908325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 35, 110 | 
| Conread position: | 81-298 | 
| Cow position: | chr3:58951345-58951125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 23, 151 | 
| Conread position: | 81-298 | 
| Cow position: | chr3:63688038-63688263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 26, 150 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:495560-495785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:2537978-2537755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 35, 134 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:3062137-3061914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 35, 148 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:4864793-4865019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 22, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:5444936-5445161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 19, 131 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:7858076-7857847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 26, 150 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:8923487-8923259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 23, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:10244552-10244326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 22, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:13326440-13326666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 22, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:14280568-14280342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 24, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:22490514-22490289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 27, 77 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:23169346-23169572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:23203780-23204006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 22, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:24350852-24350622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 16, 149 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:24572178-24572405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 22, 152 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:29573189-29573415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 22, 150 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:30352174-30351950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 22, 108 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:35884229-35884455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 26, 147 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:36861218-36861440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 26, 108 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:40194763-40194537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:42976423-42976648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 27, 138 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:44927706-44927480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:45184121-45184335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 33, 103 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:45700558-45700333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:47271988-47272212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 20, 150 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:48566943-48567166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 10, 28 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:49564909-49564683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 22, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:54959915-54959697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 79, 107 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:55110119-55110345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:57743450-57743221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 26, 121 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:59691628-59691410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 26, 117 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:60092859-60093077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 22, 119 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:61539520-61539295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 25, 150 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:62623909-62624136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:64294401-64294176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 20, 150 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:65085826-65085600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 22, 131 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:65179266-65179040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:66610114-66610342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 26, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:68156202-68155978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 37, 148 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:68888680-68888906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 27, 108 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:69929946-69930170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 8, 129 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:70335495-70335723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 37, 176 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:70731192-70730966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:75037949-75038175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 14, 150 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:75771242-75771468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:77188170-77187948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 35, 128 | 
| Conread position: | 81-299 | 
| Cow position: | chr3:82618115-82617882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 26, 157 | 
| Conread position: | 81-300 | 
| Cow position: | chr3:15089658-15089433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 27, 108 | 
| Conread position: | 81-300 | 
| Cow position: | chr3:83928615-83928388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 26, 78 | 
| Conread position: | 81-301 | 
| Cow position: | chr3:74847028-74847262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 32, 156 | 
| Conread position: | 81-304 | 
| Cow position: | chr3:73459947-73459715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 26, 118 | 
| Conread position: | 81-305 | 
| Cow position: | chr3:35110119-35109887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 81-308 | 
| Cow position: | chr3:64216463-64216229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 22, 129 | 
| Conread position: | 82-299 | 
| Cow position: | chr3:59117882-59118112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 21, 150 | 
| Conread position: | 82-299 | 
| Cow position: | chr3:73930681-73930901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 34, 59 | 
| Conread position: | 82-306 | 
| Cow position: | chr3:6442958-6442724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 21, 150 | 
| Conread position: | 83-299 | 
| Cow position: | chr3:2036020-2035797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 24, 148 | 
| Conread position: | 83-299 | 
| Cow position: | chr3:23011236-23011018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 20, 144 | 
| Conread position: | 83-299 | 
| Cow position: | chr3:30701028-30700817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 78, 42 | 
| Conread position: | 83-299 | 
| Cow position: | chr3:42671043-42670822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 33, 146 | 
| Conread position: | 83-299 | 
| Cow position: | chr3:71231128-71230904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 22, 149 | 
| Conread position: | 83-300 | 
| Cow position: | chr3:17710059-17709836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 35, 146 | 
| Conread position: | 83-386 | 
| Cow position: | chr3:22919411-22919093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 20, 148 | 
| Conread position: | 84-299 | 
| Cow position: | chr3:2680256-2680038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 34, 11 | 
| Conread position: | 84-299 | 
| Cow position: | chr3:31298439-31298655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 31, 102 | 
| Conread position: | 84-299 | 
| Cow position: | chr3:45668169-45668388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 32, 145 | 
| Conread position: | 85-271 | 
| Cow position: | chr3:1133375-1133571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 33, 148 | 
| Conread position: | 85-287 | 
| Cow position: | chr3:30358916-30359121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 12, 143 | 
| Conread position: | 85-289 | 
| Cow position: | chr3:66283871-66283665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 12, 142 | 
| Conread position: | 85-290 | 
| Cow position: | chr3:18887297-18887085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 19, 121 | 
| Conread position: | 85-297 | 
| Cow position: | chr3:11385391-11385175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 12, 134 | 
| Conread position: | 85-297 | 
| Cow position: | chr3:17865313-17865097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 16, 109 | 
| Conread position: | 85-298 | 
| Cow position: | chr3:30384967-30384747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 19, 146 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:2364373-2364593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:4031633-4031414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 33, 144 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:9641264-9641046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 22, 143 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:19884340-19884120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:19959481-19959261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:21178370-21178590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 12, 133 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:22221018-22220802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 11, 120 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:24433263-24433043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:24442220-24442440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:30568001-30567782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 123 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:38096787-38096567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 16, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:40827572-40827352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:45312772-45312549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 22, 147 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:49415965-49416185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 11, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:50762839-50762617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 22, 146 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:55085472-55085691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 16, 143 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:58865755-58865985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 31, 156 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:66829064-66829284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:77472114-77472334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 16, 145 | 
| Conread position: | 85-299 | 
| Cow position: | chr3:78023561-78023781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 85-310 | 
| Cow position: | chr3:16619867-16620099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 11, 103 | 
| Conread position: | 86-299 | 
| Cow position: | chr3:59208465-59208245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 18, 146 | 
| Conread position: | 87-293 | 
| Cow position: | chr3:73467303-73467086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 14, 147 | 
| Conread position: | 87-297 | 
| Cow position: | chr3:23876360-23876146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 29, 9 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:17895530-17895306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 14, 149 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:18352475-18352696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 10, 146 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:25012014-25011798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 31, 8 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:26669390-26669618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:27867544-27867321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 9, 149 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:34392408-34392618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 31, 8 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:49133825-49134041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 29, 8 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:58033789-58034002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 29, 142 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:64375837-64376053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 31, 8 | 
| Conread position: | 87-299 | 
| Cow position: | chr3:78110827-78110611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 29, 8 | 
| Conread position: | 88-297 | 
| Cow position: | chr3:11410390-11410606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 28, 7 | 
| Conread position: | 88-297 | 
| Cow position: | chr3:16890429-16890215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 28, 142 | 
| Conread position: | 88-297 | 
| Cow position: | chr3:20389694-20389914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 8, 109 | 
| Conread position: | 88-299 | 
| Cow position: | chr3:33254011-33254226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 8, 103 | 
| Conread position: | 89-236 | 
| Cow position: | chr3:37186554-37186395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 29, 145 | 
| Conread position: | 89-299 | 
| Cow position: | chr3:73708774-73708553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 10, 147 | 
| Conread position: | 89-299 | 
| Cow position: | chr3:76188408-76188189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 15, 144 | 
| Conread position: | 90-299 | 
| Cow position: | chr3:66603505-66603718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 28, 7 | 
| Conread position: | 92-299 | 
| Cow position: | chr3:8901127-8900910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 9, 142 | 
| Conread position: | 95-299 | 
| Cow position: | chr3:20780171-20780382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 21, 138 | 
| Conread position: | 95-299 | 
| Cow position: | chr3:43425008-43424796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 23, 165 | 
| Conread position: | 95-299 | 
| Cow position: | chr3:83201786-83201992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 23, 131 | 
| Conread position: | 99-299 | 
| Cow position: | chr3:78260842-78261047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 17, 130 | 
| Conread position: | 101-299 | 
| Cow position: | chr3:38863544-38863342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 15, 116 | 
| Conread position: | 102-299 | 
| Cow position: | chr3:26065477-26065276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 12, 116 | 
| Conread position: | 102-299 | 
| Cow position: | chr3:39171804-39172013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 13, 134 | 
| Conread position: | 102-299 | 
| Cow position: | chr3:45647355-45647154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 19, 119 | 
| Conread position: | 104-299 | 
| Cow position: | chr3:15192047-15191851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 56, 121 | 
| Conread position: | 104-307 | 
| Cow position: | chr3:72390777-72390571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 54, 121 | 
| Conread position: | 105-293 | 
| Cow position: | chr3:73961986-73962175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 55, 120 | 
| Conread position: | 106-299 | 
| Cow position: | chr3:21070550-21070746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 52, 119 | 
| Conread position: | 106-299 | 
| Cow position: | chr3:69127100-69127288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 70, 51 | 
| Conread position: | 107-299 | 
| Cow position: | chr3:80082126-80082319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 53, 114 | 
| Conread position: | 115-284 | 
| Cow position: | chr3:53046958-53047128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 45, 110 | 
| Conread position: | 115-297 | 
| Cow position: | chr3:589252-589069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 45, 86 | 
| Conread position: | 115-298 | 
| Cow position: | chr3:22089599-22089781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 45, 98 | 
| Conread position: | 115-299 | 
| Cow position: | chr3:2525127-2524942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 45, 110 | 
| Conread position: | 115-299 | 
| Cow position: | chr3:53909502-53909696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 115-299 | 
| Cow position: | chr3:61262504-61262319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 45, 110 | 
| Conread position: | 115-299 | 
| Cow position: | chr3:74233893-74233709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 46, 91 | 
| Conread position: | 116-299 | 
| Cow position: | chr3:9639181-9639363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 42, 72 | 
| Conread position: | 117-298 | 
| Cow position: | chr3:2865805-2865987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 43, 107 | 
| Conread position: | 117-299 | 
| Cow position: | chr3:18606761-18606579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 44, 108 | 
| Conread position: | 117-299 | 
| Cow position: | chr3:24758629-24758812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 43, 108 | 
| Conread position: | 119-296 | 
| Cow position: | chr3:2334963-2334786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 40, 13 | 
| Conread position: | 120-288 | 
| Cow position: | chr3:24872437-24872266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 41, 105 | 
| Conread position: | 120-299 | 
| Cow position: | chr3:14456225-14456404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 40, 72 | 
| Conread position: | 121-299 | 
| Cow position: | chr3:56476262-56476082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 40, 104 | 
| Conread position: | 123-299 | 
| Cow position: | chr3:3890000-3890178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 34, 101 | 
| Conread position: | 286-627 | 
| Cow position: | chr3:76187927-76187576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 231 | 
| Conread position: | 289-629 | 
| Cow position: | chr3:43084625-43084285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 148 | 
| Conread position: | 298-627 | 
| Cow position: | chr3:63148266-63148594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 238 | 
| Conread position: | 301-618 | 
| Cow position: | chr3:40101487-40101796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 112 | 
| Conread position: | 301-619 | 
| Cow position: | chr3:56103111-56102795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 236 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:3984481-3984152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 183 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:13723340-13723667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 290 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:19881421-19881094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 290 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:23497386-23497713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 290 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:24638777-24638455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 205, 62 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:32490341-32490668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 290 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:35343022-35342695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 290 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:40520568-40520895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 290 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:45312150-45311837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 164 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:55374447-55374131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 142 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:56148667-56148338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 291 | 
| Conread position: | 301-627 | 
| Cow position: | chr3:66968508-66968834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 145 | 
| Conread position: | 304-615 | 
| Cow position: | chr3:79596001-79595690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 55 | 
| Conread position: | 306-627 | 
| Cow position: | chr3:30909183-30908848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 114 | 
| Conread position: | 322-627 | 
| Cow position: | chr3:32769135-32768835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 92 | 
| Conread position: | 333-623 | 
| Cow position: | chr3:64698149-64697876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 80, 36 | 
| Conread position: | 422-627 | 
| Cow position: | chr3:45947574-45947771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 7, 89 | 
| Conread position: | 435-627 | 
| Cow position: | chr3:61277801-61277606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 121, 74 | 
Show alignments to all cow chromosomes.
