Cow genome map

Conread name: rhlv14b_h21.y1

Conread position: 31-298
Cow position: chr6:28156281-28156561 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 68

Conread position: 38-299
Cow position: chr6:44598071-44598340 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 13

Conread position: 43-299
Cow position: chr6:38771113-38770864 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 8

Conread position: 44-299
Cow position: chr6:55763208-55762951 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 74, 30

Conread position: 46-296
Cow position: chr6:58370397-58370131 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 59

Conread position: 61-299
Cow position: chr6:42131018-42131266 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 27

Conread position: 66-279
Cow position: chr6:31081853-31081630 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 141

Conread position: 66-296
Cow position: chr6:46224731-46224971 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr6:2668504-2668747 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr6:9226472-9226229 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr6:11868983-11869225 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr6:12947550-12947791 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 120

Conread position: 66-299
Cow position: chr6:16049349-16049585 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 12, 143

Conread position: 66-299
Cow position: chr6:17631815-17632059 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 169

Conread position: 66-299
Cow position: chr6:21712660-21712417 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 119

Conread position: 66-299
Cow position: chr6:23879105-23879348 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 169

Conread position: 66-299
Cow position: chr6:39088576-39088333 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr6:54886661-54886904 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 12, 168

Conread position: 66-299
Cow position: chr6:55239644-55239401 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 168

Conread position: 67-297
Cow position: chr6:19569984-19570218 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 122

Conread position: 67-299
Cow position: chr6:1278708-1278950 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 166

Conread position: 67-299
Cow position: chr6:6614236-6614001 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 165

Conread position: 67-299
Cow position: chr6:8753506-8753747 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 166

Conread position: 67-299
Cow position: chr6:13741499-13741259 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 165

Conread position: 67-299
Cow position: chr6:53542516-53542758 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 167

Conread position: 67-299
Cow position: chr6:56441127-56441369 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 167

Conread position: 67-299
Cow position: chr6:64431742-64431508 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 116

Conread position: 72-299
Cow position: chr6:24243223-24242996 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 99

Conread position: 76-297
Cow position: chr6:706936-706707 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 156

Conread position: 76-299
Cow position: chr6:2012811-2012584 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 153

Conread position: 77-290
Cow position: chr6:67544501-67544722 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 155

Conread position: 77-294
Cow position: chr6:61136956-61136734 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 152

Conread position: 77-299
Cow position: chr6:2898703-2898473 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 155

Conread position: 77-299
Cow position: chr6:9235453-9235223 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:11452926-11453156 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:13494150-13494382 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 157

Conread position: 77-299
Cow position: chr6:20268468-20268240 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 31, 143

Conread position: 77-299
Cow position: chr6:21164244-21164014 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:25095815-25095585 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:25374167-25374397 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:25376199-25375969 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 155

Conread position: 77-299
Cow position: chr6:27152616-27152386 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 156

Conread position: 77-299
Cow position: chr6:27541502-27541272 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:38061553-38061323 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:38917098-38917328 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:41470858-41470628 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:41822896-41823126 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:48872416-48872645 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 130

Conread position: 77-299
Cow position: chr6:49963222-49963452 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 131

Conread position: 77-299
Cow position: chr6:50755814-50755584 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:53271595-53271365 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 156

Conread position: 77-299
Cow position: chr6:55361897-55361667 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:55388677-55388448 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 154

Conread position: 77-299
Cow position: chr6:55721109-55720879 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 155

Conread position: 77-299
Cow position: chr6:65863265-65863035 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 155

Conread position: 81-236
Cow position: chr6:35103540-35103700 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 141

Conread position: 81-236
Cow position: chr6:68252571-68252406 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 151

Conread position: 81-239
Cow position: chr6:16706794-16706629 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 141

Conread position: 81-258
Cow position: chr6:24652396-24652579 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 15

Conread position: 81-268
Cow position: chr6:41824041-41824237 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 151

Conread position: 81-269
Cow position: chr6:24327348-24327551 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 157

Conread position: 81-269
Cow position: chr6:32125854-32125657 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 151

Conread position: 81-290
Cow position: chr6:5302617-5302829 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 8

Conread position: 81-293
Cow position: chr6:16700046-16699838 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 89

Conread position: 81-296
Cow position: chr6:54202107-54202330 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 108

Conread position: 81-297
Cow position: chr6:42267651-42267429 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 149

Conread position: 81-297
Cow position: chr6:43188680-43188456 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 139

Conread position: 81-299
Cow position: chr6:181606-181831 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 58

Conread position: 81-299
Cow position: chr6:1770408-1770632 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 95

Conread position: 81-299
Cow position: chr6:1783985-1784204 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 143

Conread position: 81-299
Cow position: chr6:2185565-2185791 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr6:3719771-3719545 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr6:4389645-4389423 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 148

Conread position: 81-299
Cow position: chr6:7801578-7801799 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 149

Conread position: 81-299
Cow position: chr6:8206124-8205898 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 151

Conread position: 81-299
Cow position: chr6:8283840-8284065 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr6:9321217-9320991 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr6:12623258-12623032 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr6:13367082-13366860 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 20

Conread position: 81-299
Cow position: chr6:14198581-14198358 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 149

Conread position: 81-299
Cow position: chr6:15310076-15310302 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 150

Conread position: 81-299
Cow position: chr6:16410983-16410765 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 108

Conread position: 81-299
Cow position: chr6:16675609-16675378 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 156

Conread position: 81-299
Cow position: chr6:16737808-16737582 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr6:18803122-18803348 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr6:19719507-19719281 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr6:20245871-20245645 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr6:28111901-28112127 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 151

Conread position: 81-299
Cow position: chr6:36901947-36901721 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 151

Conread position: 81-299
Cow position: chr6:40031981-40031755 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 151

Conread position: 81-299
Cow position: chr6:40357940-40358167 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 150

Conread position: 81-299
Cow position: chr6:42565473-42565248 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 152

Conread position: 81-299
Cow position: chr6:46948749-46948523 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 150

Conread position: 81-299
Cow position: chr6:47540313-47540086 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 152

Conread position: 81-299
Cow position: chr6:53178427-53178198 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 151

Conread position: 81-299
Cow position: chr6:55040430-55040656 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 152

Conread position: 81-299
Cow position: chr6:58940435-58940660 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 108

Conread position: 81-299
Cow position: chr6:60877232-60877006 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 129

Conread position: 81-299
Cow position: chr6:65862473-65862247 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 151

Conread position: 81-301
Cow position: chr6:35181466-35181688 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 107

Conread position: 81-306
Cow position: chr6:9737325-9737560 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 154

Conread position: 81-353
Cow position: chr6:50572105-50571825 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 139

Conread position: 82-293
Cow position: chr6:52556688-52556907 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 104

Conread position: 82-299
Cow position: chr6:21311972-21312194 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 148

Conread position: 82-299
Cow position: chr6:31752838-31752613 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 150

Conread position: 82-299
Cow position: chr6:49706812-49707037 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 150

Conread position: 82-299
Cow position: chr6:50527445-50527213 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 156

Conread position: 83-299
Cow position: chr6:7137407-7137631 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 149

Conread position: 83-299
Cow position: chr6:32916135-32916357 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 116

Conread position: 83-299
Cow position: chr6:48169730-48169506 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 149

Conread position: 84-297
Cow position: chr6:17050302-17050083 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 134

Conread position: 84-298
Cow position: chr6:58076009-58075784 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 150

Conread position: 84-299
Cow position: chr6:41193282-41193058 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 149

Conread position: 85-241
Cow position: chr6:11720997-11721161 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 145

Conread position: 85-287
Cow position: chr6:66874111-66873901 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 151

Conread position: 85-288
Cow position: chr6:56842939-56842732 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 9

Conread position: 85-296
Cow position: chr6:9322920-9322703 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 144

Conread position: 85-297
Cow position: chr6:11442041-11442257 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 145

Conread position: 85-297
Cow position: chr6:53740222-53740004 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr6:3444889-3445103 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 142

Conread position: 85-299
Cow position: chr6:6067908-6068126 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 144

Conread position: 85-299
Cow position: chr6:20689545-20689761 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 102

Conread position: 85-299
Cow position: chr6:25789806-25790027 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr6:27477784-27477563 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 146

Conread position: 85-299
Cow position: chr6:47674904-47674685 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr6:51718486-51718266 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 145

Conread position: 85-299
Cow position: chr6:55538342-55538564 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 145

Conread position: 85-299
Cow position: chr6:65844987-65844766 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 145

Conread position: 85-299
Cow position: chr6:67214525-67214306 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 147

Conread position: 85-299
Cow position: chr6:67304557-67304342 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 75, 140

Conread position: 86-299
Cow position: chr6:68049030-68048812 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 143

Conread position: 87-227
Cow position: chr6:18080737-18080885 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 8

Conread position: 87-293
Cow position: chr6:19171062-19170851 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 8

Conread position: 87-298
Cow position: chr6:16765615-16765830 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 8

Conread position: 87-299
Cow position: chr6:540061-539846 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 98

Conread position: 87-299
Cow position: chr6:1174722-1174940 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 144

Conread position: 87-299
Cow position: chr6:5095773-5095989 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 102

Conread position: 87-299
Cow position: chr6:6470992-6471209 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 54

Conread position: 87-299
Cow position: chr6:10332325-10332547 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 147

Conread position: 87-299
Cow position: chr6:21831732-21831949 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 6

Conread position: 87-299
Cow position: chr6:43621943-43621730 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 7

Conread position: 87-299
Cow position: chr6:46292548-46292768 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 103

Conread position: 87-299
Cow position: chr6:46585061-46584845 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 7

Conread position: 87-299
Cow position: chr6:51468243-51468024 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 139

Conread position: 87-299
Cow position: chr6:60516505-60516291 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 8

Conread position: 87-299
Cow position: chr6:66304064-66304277 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 31, 8

Conread position: 88-297
Cow position: chr6:19045116-19044903 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 141

Conread position: 88-299
Cow position: chr6:16103470-16103689 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 141

Conread position: 88-299
Cow position: chr6:57309147-57308932 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 7

Conread position: 91-299
Cow position: chr6:36470791-36471006 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 140

Conread position: 94-276
Cow position: chr6:39995340-39995524 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 109

Conread position: 94-299
Cow position: chr6:14949741-14949949 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 53

Conread position: 94-299
Cow position: chr6:55140910-55141123 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 137

Conread position: 95-299
Cow position: chr6:2894998-2894791 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 132

Conread position: 95-299
Cow position: chr6:59620411-59620201 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 135

Conread position: 98-299
Cow position: chr6:50114613-50114407 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 131

Conread position: 100-293
Cow position: chr6:7009502-7009310 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 87

Conread position: 101-300
Cow position: chr6:47339592-47339803 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 135

Conread position: 102-284
Cow position: chr6:6099964-6100150 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 118

Conread position: 102-299
Cow position: chr6:47988824-47988622 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 125

Conread position: 102-299
Cow position: chr6:50983946-50983744 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 127

Conread position: 106-299
Cow position: chr6:14063903-14064096 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 119

Conread position: 106-299
Cow position: chr6:47773460-47773662 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 127

Conread position: 107-293
Cow position: chr6:60017824-60017641 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 115

Conread position: 107-299
Cow position: chr6:8599543-8599349 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 119

Conread position: 115-299
Cow position: chr6:18955287-18955472 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 110

Conread position: 115-299
Cow position: chr6:65016144-65016328 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 109

Conread position: 116-299
Cow position: chr6:42931353-42931535 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 66

Conread position: 116-299
Cow position: chr6:52478697-52478882 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 102

Conread position: 144-297
Cow position: chr6:26697198-26697351 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 82

Conread position: 292-627
Cow position: chr6:28549612-28549974 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 7

Conread position: 301-618
Cow position: chr6:52977751-52978059 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 128

Conread position: 301-623
Cow position: chr6:46283684-46284006 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 24

Conread position: 301-627
Cow position: chr6:11721792-11722113 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 280

Conread position: 301-627
Cow position: chr6:31912759-31913086 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 290

Conread position: 301-627
Cow position: chr6:35704101-35704432 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 194

Conread position: 302-627
Cow position: chr6:7176153-7176475 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 209

Conread position: 302-627
Cow position: chr6:65874869-65875191 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 85

Conread position: 303-619
Cow position: chr6:49761877-49761561 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 303-625
Cow position: chr6:6595832-6595514 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 50

Conread position: 303-626
Cow position: chr6:30316531-30316854 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 72

Conread position: 303-627
Cow position: chr6:64426201-64425881 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 112

Conread position: 319-627
Cow position: chr6:42267123-42266829 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 325-627
Cow position: chr6:11353781-11354089 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 194

Conread position: 333-627
Cow position: chr6:3119155-3119453 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 43

Conread position: 337-627
Cow position: chr6:4274449-4274159 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 110

Conread position: 343-629
Cow position: chr6:52900320-52900035 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 230

Conread position: 366-627
Cow position: chr6:12629246-12628991 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 151

Conread position: 462-627
Cow position: chr6:2581653-2581487 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 21

Show alignments to all cow chromosomes.