Cow genome map
| Conread name: | rhlv16b_j11.y1 |
| Conread position: | 1-142 |
| Cow position: | chr1:24922224-24922371 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-143 |
| Cow position: | chr1:9595645-9595791 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-152 |
| Cow position: | chr1:21090765-21090610 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 93 |
| Conread position: | 1-154 |
| Cow position: | chr1:2006395-2006553 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-154 |
| Cow position: | chr1:14240767-14240925 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-154 |
| Cow position: | chr1:33854567-33854409 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 93 |
| Conread position: | 1-154 |
| Cow position: | chr1:102814773-102814615 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-160 |
| Cow position: | chr1:72864250-72864089 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 141 |
| Conread position: | 1-163 |
| Cow position: | chr1:8470862-8471029 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-163 |
| Cow position: | chr1:68818609-68818772 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 1-163 |
| Cow position: | chr1:76873182-76873015 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-163 |
| Cow position: | chr1:85795247-85795080 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-164 |
| Cow position: | chr1:31362813-31362981 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-164 |
| Cow position: | chr1:70051539-70051373 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-167 |
| Cow position: | chr1:81357356-81357518 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-169 |
| Cow position: | chr1:8828321-8828148 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-169 |
| Cow position: | chr1:55780171-55779999 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-169 |
| Cow position: | chr1:93857822-93857650 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 93, 139 |
| Conread position: | 1-169 |
| Cow position: | chr1:102431439-102431612 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:12058220-12058396 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:21377258-21377434 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:25053287-25053463 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:29428899-29428721 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:38478605-38478429 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:52355372-52355548 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:55043962-55044138 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:57526576-57526400 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:57574286-57574461 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 152 |
| Conread position: | 1-172 |
| Cow position: | chr1:58340222-58340046 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 107, 93 |
| Conread position: | 1-172 |
| Cow position: | chr1:61342406-61342578 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:66490881-66490705 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:69406458-69406282 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 109, 93 |
| Conread position: | 1-172 |
| Cow position: | chr1:72086899-72086721 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:72986758-72986582 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:85777159-85777335 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:86599715-86599891 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:88179158-88178982 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:88676755-88676579 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:94662953-94662777 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 93 |
| Conread position: | 1-172 |
| Cow position: | chr1:102552317-102552141 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:7162508-7162685 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:7195919-7196096 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:12468493-12468667 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 1-173 |
| Cow position: | chr1:28413924-28414094 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 71 |
| Conread position: | 1-173 |
| Cow position: | chr1:34684786-34684606 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 165 |
| Conread position: | 1-173 |
| Cow position: | chr1:35598510-35598687 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:54295842-54296020 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:56644580-56644755 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 1-173 |
| Cow position: | chr1:61748150-61748327 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:68846410-68846585 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 1-175 |
| Cow position: | chr1:16797796-16797974 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 98, 131 |
| Conread position: | 1-176 |
| Cow position: | chr1:475477-475298 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 98, 75 |
| Conread position: | 1-176 |
| Cow position: | chr1:3339966-3339787 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 1-176 |
| Cow position: | chr1:3969964-3970144 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:4208613-4208793 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:7324371-7324191 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:10725924-10725744 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:11289089-11289269 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:11771490-11771669 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:15149343-15149523 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:18962431-18962610 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 98, 85 |
| Conread position: | 1-176 |
| Cow position: | chr1:19145869-19146046 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 105, 68 |
| Conread position: | 1-176 |
| Cow position: | chr1:19236197-19236377 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:20527460-20527280 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:21133807-21133987 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:22226943-22226764 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 104, 93 |
| Conread position: | 1-176 |
| Cow position: | chr1:26141907-26142088 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 93 |
| Conread position: | 1-176 |
| Cow position: | chr1:29365706-29365526 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:30372205-30372025 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:31498420-31498240 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 1-176 |
| Cow position: | chr1:31535152-31534972 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:31707782-31707602 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:33716260-33716080 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:40681431-40681611 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:49268184-49268003 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:51393381-51393213 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:52054120-52053941 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 1-176 |
| Cow position: | chr1:55145345-55145165 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 107, 93 |
| Conread position: | 1-176 |
| Cow position: | chr1:55273742-55273922 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 93 |
| Conread position: | 1-176 |
| Cow position: | chr1:57635518-57635700 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 109, 92 |
| Conread position: | 1-176 |
| Cow position: | chr1:59202963-59203143 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:59483563-59483743 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:60342356-60342171 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:61563337-61563157 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:66971859-66972037 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:67831836-67832016 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:69770119-69769939 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:71559444-71559624 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:73565178-73565358 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:75403194-75403016 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 150 |
| Conread position: | 1-176 |
| Cow position: | chr1:77554698-77554877 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 98, 142 |
| Conread position: | 1-176 |
| Cow position: | chr1:78921713-78921893 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:79553796-79553616 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:82909531-82909709 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 1-176 |
| Cow position: | chr1:86593004-86593184 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:89090237-89090416 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 93 |
| Conread position: | 1-176 |
| Cow position: | chr1:90865336-90865153 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:91105342-91105162 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:91902319-91902139 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-176 |
| Cow position: | chr1:97285355-97285543 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-177 |
| Cow position: | chr1:89492930-89493111 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-177 |
| Cow position: | chr1:99916739-99916559 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-180 |
| Cow position: | chr1:99117315-99117128 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 166 |
| Conread position: | 168-421 |
| Cow position: | chr1:82407467-82407211 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 172-500 |
| Cow position: | chr1:63501339-63501668 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 137 |
| Conread position: | 173-445 |
| Cow position: | chr1:28276519-28276796 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 99, 163 |
| Conread position: | 175-383 |
| Cow position: | chr1:87969231-87969444 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 175-415 |
| Cow position: | chr1:15347701-15347456 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 169 |
| Conread position: | 175-424 |
| Cow position: | chr1:28801540-28801281 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 174 |
| Conread position: | 175-454 |
| Cow position: | chr1:27306092-27305823 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 155, 92 |
| Conread position: | 175-454 |
| Cow position: | chr1:52918735-52918456 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 175-460 |
| Cow position: | chr1:68607664-68607371 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 160 |
| Conread position: | 175-462 |
| Cow position: | chr1:53045896-53045613 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 123 |
| Conread position: | 175-465 |
| Cow position: | chr1:54365937-54365648 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 175-467 |
| Cow position: | chr1:5318644-5318928 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 177, 98 |
| Conread position: | 175-467 |
| Cow position: | chr1:99374857-99375142 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 175-468 |
| Cow position: | chr1:72981151-72981448 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 135, 169 |
| Conread position: | 175-468 |
| Cow position: | chr1:89899818-89899522 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 127, 176 |
| Conread position: | 175-469 |
| Cow position: | chr1:18014306-18014006 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 133, 158 |
| Conread position: | 175-469 |
| Cow position: | chr1:25887272-25886978 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 251, 29 |
| Conread position: | 175-469 |
| Cow position: | chr1:79920843-79920544 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 135, 169 |
| Conread position: | 175-470 |
| Cow position: | chr1:1461443-1461148 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 132, 61 |
| Conread position: | 175-470 |
| Cow position: | chr1:38385401-38385106 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 133, 164 |
| Conread position: | 175-470 |
| Cow position: | chr1:39482097-39481799 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 165 |
| Conread position: | 175-470 |
| Cow position: | chr1:40307948-40308246 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 85, 157 |
| Conread position: | 175-470 |
| Cow position: | chr1:55276602-55276301 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 175-470 |
| Cow position: | chr1:61308886-61309186 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 175-470 |
| Cow position: | chr1:62853958-62853662 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 175-470 |
| Cow position: | chr1:62925497-62925797 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 175-470 |
| Cow position: | chr1:69766348-69766646 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 175-470 |
| Cow position: | chr1:72136525-72136823 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 175-470 |
| Cow position: | chr1:85791573-85791870 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 175-470 |
| Cow position: | chr1:87207533-87207244 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 177, 98 |
| Conread position: | 175-470 |
| Cow position: | chr1:88635255-88635554 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 137, 169 |
| Conread position: | 175-470 |
| Cow position: | chr1:101858100-101857802 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 137, 169 |
| Conread position: | 175-483 |
| Cow position: | chr1:82355612-82355915 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 175-491 |
| Cow position: | chr1:8554212-8554532 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 135, 169 |
| Conread position: | 175-491 |
| Cow position: | chr1:18880509-18880189 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 175-491 |
| Cow position: | chr1:20828773-20829093 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 135, 169 |
| Conread position: | 175-491 |
| Cow position: | chr1:28710800-28711120 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 175-491 |
| Cow position: | chr1:30283658-30283339 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 135, 169 |
| Conread position: | 175-491 |
| Cow position: | chr1:33851163-33851482 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 73 |
| Conread position: | 175-491 |
| Cow position: | chr1:39543655-39543973 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 175-491 |
| Cow position: | chr1:40053239-40053559 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 175-491 |
| Cow position: | chr1:71562694-71562370 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 175-491 |
| Cow position: | chr1:86548250-86547931 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 134, 168 |
| Conread position: | 175-491 |
| Cow position: | chr1:91718750-91718435 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 175-502 |
| Cow position: | chr1:89425471-89425802 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 175-503 |
| Cow position: | chr1:61738618-61738297 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 49 |
| Conread position: | 175-503 |
| Cow position: | chr1:77112559-77112232 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 177, 86 |
| Conread position: | 175-505 |
| Cow position: | chr1:79109179-79109501 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 19 |
| Conread position: | 176-483 |
| Cow position: | chr1:80556170-80555879 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 177-468 |
| Cow position: | chr1:44101859-44101566 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 96 |
| Conread position: | 177-470 |
| Cow position: | chr1:33711949-33712247 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 135, 174 |
| Conread position: | 177-470 |
| Cow position: | chr1:99021069-99020775 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 177-483 |
| Cow position: | chr1:15025782-15026086 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 177-483 |
| Cow position: | chr1:31330901-31330595 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 74 |
| Conread position: | 177-496 |
| Cow position: | chr1:21356728-21356427 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 255, 39 |
| Conread position: | 178-435 |
| Cow position: | chr1:73009687-73009940 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 159 |
| Conread position: | 191-471 |
| Cow position: | chr1:32342175-32341891 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 147 |
| Conread position: | 195-450 |
| Cow position: | chr1:69287660-69287406 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 115, 61 |
| Conread position: | 197-470 |
| Cow position: | chr1:18244474-18244201 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 155, 142 |
| Conread position: | 203-452 |
| Cow position: | chr1:20988864-20989117 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 103, 136 |
Show alignments to all cow chromosomes.