Cow genome map


           Conread name:
           rhlv16b_j11.y1
        

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               111, 143
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               98, 62
               

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 65
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               104, 93
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               104, 93
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               104, 47
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               102, 93
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 169
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 169
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               106, 56
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-175
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 47
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 47
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 55
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 150
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 93
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 131
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               104, 93
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 124
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               103, 93
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               105, 93
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               53, 68
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 118
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               98, 81
               

               Conread position:
               5-172
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               94, 127
               

               Conread position:
               167-491
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               10, 189
               

               Conread position:
               168-470
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               125, 7
               

               Conread position:
               175-288
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               175-413
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               135, 107
               

               Conread position:
               175-459
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               175-464
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 165
               

               Conread position:
               175-468
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               169, 57
               

               Conread position:
               175-469
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               135, 179
               

               Conread position:
               175-470
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 165
               

               Conread position:
               175-470
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               152, 136
               

               Conread position:
               175-470
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               133, 249
               

               Conread position:
               175-470
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               135, 169
               

               Conread position:
               175-470
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               133, 57
               

               Conread position:
               175-470
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 57
               

               Conread position:
               175-470
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               137, 169
               

               Conread position:
               175-470
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               133, 169
               

               Conread position:
               175-471
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               127, 57
               

               Conread position:
               175-471
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               177, 17
               

               Conread position:
               175-491
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               123, 107
               

               Conread position:
               175-491
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               135, 180
               

               Conread position:
               175-491
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               175, 98
               

               Conread position:
               175-491
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 85
               

               Conread position:
               175-491
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               135, 169
               

               Conread position:
               175-491
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               123, 103
               

               Conread position:
               175-496
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 72
               

               Conread position:
               175-496
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 98
               

               Conread position:
               175-499
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               162, 119
               

               Conread position:
               175-503
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 135
               

               Conread position:
               176-448
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               51, 164
               

               Conread position:
               196-390
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               176, 109
               

               Conread position:
               196-444
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               189, 59
               
Show alignments to all cow chromosomes.