Cow genome map

Conread name: rhlv16b_j11.y1

Conread position: 1-145
Cow position: chr10:21656448-21656303 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 111, 143

Conread position: 1-147
Cow position: chr10:41160729-41160578 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-152
Cow position: chr10:278032-278188 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 1-154
Cow position: chr10:18885923-18886081 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-154
Cow position: chr10:50451882-50451724 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1-154
Cow position: chr10:57554011-57554168 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 62

Conread position: 1-163
Cow position: chr10:15888307-15888140 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-163
Cow position: chr10:50199307-50199138 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 1-169
Cow position: chr10:2736339-2736167 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 65

Conread position: 1-169
Cow position: chr10:10721926-10722098 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 103, 0

Conread position: 1-172
Cow position: chr10:1380821-1380645 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:16929488-16929312 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:19141284-19141460 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:19330911-19330735 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 104, 93

Conread position: 1-172
Cow position: chr10:19514554-19514378 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:22104805-22104629 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:23412371-23412195 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:24297178-24297354 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr10:30682168-30682345 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 1-172
Cow position: chr10:39037726-39037902 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:44765013-44764837 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 93

Conread position: 1-172
Cow position: chr10:45484684-45484855 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 104, 47

Conread position: 1-172
Cow position: chr10:51558725-51558549 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:57986371-57986548 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr10:64304701-64304877 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr10:64347295-64347119 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 1-173
Cow position: chr10:1720542-1720718 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 102, 93

Conread position: 1-173
Cow position: chr10:1979656-1979833 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 1-173
Cow position: chr10:5858147-5857971 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 169

Conread position: 1-173
Cow position: chr10:14807262-14807086 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 169

Conread position: 1-173
Cow position: chr10:14982636-14982814 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 1-173
Cow position: chr10:26539585-26539761 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-173
Cow position: chr10:34666587-34666764 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 1-173
Cow position: chr10:45769086-45768914 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 56

Conread position: 1-173
Cow position: chr10:66496077-66496254 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-175
Cow position: chr10:26292164-26292343 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr10:76423-76240 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:1662648-1662822 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 47

Conread position: 1-176
Cow position: chr10:2612412-2612233 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 1-176
Cow position: chr10:6245720-6245892 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 98, 47

Conread position: 1-176
Cow position: chr10:7895124-7895302 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 55

Conread position: 1-176
Cow position: chr10:10047215-10047395 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:19390267-19390447 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:19491452-19491632 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:20380663-20380840 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 150

Conread position: 1-176
Cow position: chr10:20516237-20516058 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 93

Conread position: 1-176
Cow position: chr10:21397896-21398076 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:21737351-21737531 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:23913529-23913708 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 1-176
Cow position: chr10:24308874-24309048 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 77

Conread position: 1-176
Cow position: chr10:25563229-25563409 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:26765872-26765693 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 52

Conread position: 1-176
Cow position: chr10:30689323-30689143 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:30720020-30719840 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:32365264-32365084 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:33556332-33556512 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:38941443-38941264 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 131

Conread position: 1-176
Cow position: chr10:39811186-39811366 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:41405701-41405521 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 93

Conread position: 1-176
Cow position: chr10:41561151-41561331 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:41570425-41570249 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:44705385-44705563 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 124

Conread position: 1-176
Cow position: chr10:45978219-45978399 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:46226149-46225971 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 103, 93

Conread position: 1-176
Cow position: chr10:46241360-46241180 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 93

Conread position: 1-176
Cow position: chr10:52826304-52826484 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:54376609-54376789 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:55098619-55098799 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr10:58687507-58687327 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr10:59840450-59840635 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 68

Conread position: 1-176
Cow position: chr10:61312809-61312633 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 118

Conread position: 1-187
Cow position: chr10:2429199-2429387 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 98, 81

Conread position: 5-172
Cow position: chr10:68978588-68978418 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 127

Conread position: 167-491
Cow position: chr10:14803733-14804063 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 189

Conread position: 168-470
Cow position: chr10:62778247-62778554 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 125, 7

Conread position: 175-288
Cow position: chr10:64303062-64302949 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 175-413
Cow position: chr10:22842688-22842921 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 135, 107

Conread position: 175-459
Cow position: chr10:14928556-14928823 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 16

Conread position: 175-464
Cow position: chr10:28116519-28116235 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 165

Conread position: 175-468
Cow position: chr10:38546315-38546020 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 169, 57

Conread position: 175-469
Cow position: chr10:54059447-54059150 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 135, 179

Conread position: 175-470
Cow position: chr10:184169-184476 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 165

Conread position: 175-470
Cow position: chr10:4192310-4192026 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 152, 136

Conread position: 175-470
Cow position: chr10:16475669-16475968 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 193
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 133, 249

Conread position: 175-470
Cow position: chr10:21740844-21740545 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 135, 169

Conread position: 175-470
Cow position: chr10:24298944-24298647 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 133, 57

Conread position: 175-470
Cow position: chr10:24978223-24977932 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 57

Conread position: 175-470
Cow position: chr10:25498259-25498559 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 137, 169

Conread position: 175-470
Cow position: chr10:41567014-41567310 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 191
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 133, 169

Conread position: 175-471
Cow position: chr10:34685803-34686101 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 127, 57

Conread position: 175-471
Cow position: chr10:38847277-38847565 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 177, 17

Conread position: 175-491
Cow position: chr10:11685760-11685444 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 123, 107

Conread position: 175-491
Cow position: chr10:21400764-21400444 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 135, 180

Conread position: 175-491
Cow position: chr10:25565338-25565031 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 175, 98

Conread position: 175-491
Cow position: chr10:39179691-39180010 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 85

Conread position: 175-491
Cow position: chr10:41157355-41157674 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 135, 169

Conread position: 175-491
Cow position: chr10:47906685-47907005 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 123, 103

Conread position: 175-496
Cow position: chr10:21076269-21076589 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 72

Conread position: 175-496
Cow position: chr10:24313921-24313603 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 98

Conread position: 175-499
Cow position: chr10:51952698-51952383 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 162, 119

Conread position: 175-503
Cow position: chr10:41351847-41351520 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 135

Conread position: 176-448
Cow position: chr10:58377682-58377405 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 51, 164

Conread position: 196-390
Cow position: chr10:42748026-42748217 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 176, 109

Conread position: 196-444
Cow position: chr10:42109657-42109905 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 189, 59

Show alignments to all cow chromosomes.