Cow genome map

Conread name: rhlv16b_j11.y1

Conread position: 1-145
Cow position: chr15:22760092-22760241 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-152
Cow position: chr15:20352890-20353038 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 95

Conread position: 1-152
Cow position: chr15:35416508-35416352 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 87

Conread position: 1-162
Cow position: chr15:4787887-4788052 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 1-163
Cow position: chr15:36940470-36940637 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-169
Cow position: chr15:7547779-7547608 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 65

Conread position: 1-169
Cow position: chr15:26389051-26389224 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-170
Cow position: chr15:17034715-17034889 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 1-171
Cow position: chr15:44364442-44364618 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 1-172
Cow position: chr15:2080243-2080067 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr15:2899346-2899522 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr15:5197262-5197086 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr15:7319478-7319302 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr15:7586869-7587045 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr15:21825777-21825601 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr15:37394639-37394465 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 55

Conread position: 1-172
Cow position: chr15:44073359-44073183 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 93

Conread position: 1-172
Cow position: chr15:44666299-44666475 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr15:47201657-47201832 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 81

Conread position: 1-173
Cow position: chr15:29396-29573 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 1-173
Cow position: chr15:5640679-5640855 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 169

Conread position: 1-173
Cow position: chr15:18264850-18265026 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 85

Conread position: 1-173
Cow position: chr15:25132869-25132692 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-173
Cow position: chr15:39091286-39091459 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 1-176
Cow position: chr15:442876-443055 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 98, 70

Conread position: 1-176
Cow position: chr15:1298741-1298921 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:1785678-1785498 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:4214081-4213901 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:4829248-4829068 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 1-176
Cow position: chr15:6152732-6152911 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 137

Conread position: 1-176
Cow position: chr15:6658201-6658384 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr15:7267513-7267331 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:7565915-7565735 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:13076432-13076251 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 1-176
Cow position: chr15:13546140-13546321 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 1-176
Cow position: chr15:17074451-17074630 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 85

Conread position: 1-176
Cow position: chr15:21841178-21840998 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 93

Conread position: 1-176
Cow position: chr15:26591434-26591614 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:27747608-27747788 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr15:28487217-28487396 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 1-176
Cow position: chr15:31585486-31585666 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:35643539-35643719 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr15:36329548-36329728 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:41359914-41359735 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 60

Conread position: 1-176
Cow position: chr15:42943694-42943874 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr15:45244511-45244326 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 85

Conread position: 1-185
Cow position: chr15:44384-44196 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 85

Conread position: 1-244
Cow position: chr15:24969035-24969285 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 0

Conread position: 170-462
Cow position: chr15:10479218-10478916 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 21

Conread position: 174-295
Cow position: chr15:6621809-6621929 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 175-332
Cow position: chr15:32286755-32286917 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 175-390
Cow position: chr15:496556-496773 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 98

Conread position: 175-428
Cow position: chr15:49676515-49676760 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 40

Conread position: 175-445
Cow position: chr15:18023292-18023023 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 58

Conread position: 175-445
Cow position: chr15:44828304-44828572 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 129, 119

Conread position: 175-447
Cow position: chr15:15266155-15265889 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 175-454
Cow position: chr15:22204624-22204340 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 135, 169

Conread position: 175-460
Cow position: chr15:13428528-13428817 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 85

Conread position: 175-462
Cow position: chr15:35648726-35648450 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 57

Conread position: 175-465
Cow position: chr15:7788875-7788587 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 61

Conread position: 175-465
Cow position: chr15:8098977-8099270 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 175

Conread position: 175-467
Cow position: chr15:36970413-36970710 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 150

Conread position: 175-468
Cow position: chr15:8408052-8408341 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 175, 65

Conread position: 175-468
Cow position: chr15:10888099-10888396 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 168

Conread position: 175-469
Cow position: chr15:4170204-4169911 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 137, 57

Conread position: 175-469
Cow position: chr15:40104958-40105252 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 116, 22

Conread position: 175-470
Cow position: chr15:1763581-1763879 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 169

Conread position: 175-470
Cow position: chr15:3010362-3010062 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 85

Conread position: 175-470
Cow position: chr15:4195952-4196252 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 119

Conread position: 175-470
Cow position: chr15:21877868-21877568 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 85

Conread position: 175-470
Cow position: chr15:36642116-36642403 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 177, 21

Conread position: 175-470
Cow position: chr15:51671847-51672136 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 177, 51

Conread position: 175-489
Cow position: chr15:2007029-2007344 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 120

Conread position: 175-489
Cow position: chr15:24294580-24294898 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 135, 169

Conread position: 175-489
Cow position: chr15:38979408-38979726 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 19

Conread position: 175-490
Cow position: chr15:12614556-12614875 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 98, 267

Conread position: 175-491
Cow position: chr15:444098-444418 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 85

Conread position: 175-491
Cow position: chr15:1519660-1519341 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 169

Conread position: 175-491
Cow position: chr15:1771988-1772307 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 85

Conread position: 175-491
Cow position: chr15:17080699-17080393 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 79, 85

Conread position: 175-491
Cow position: chr15:29009332-29009648 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 207
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 169

Conread position: 175-496
Cow position: chr15:2676798-2676497 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 177, 53

Conread position: 175-496
Cow position: chr15:17787668-17787352 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 90

Conread position: 176-470
Cow position: chr15:7522998-7522704 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 176-471
Cow position: chr15:1662869-1663158 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 174, 109

Conread position: 177-465
Cow position: chr15:4649328-4649610 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 133, 163

Conread position: 177-465
Cow position: chr15:7544371-7544665 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 131, 167

Conread position: 177-469
Cow position: chr15:6472419-6472130 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 126, 167

Conread position: 177-470
Cow position: chr15:35747793-35748082 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 96

Conread position: 177-495
Cow position: chr15:17219379-17219057 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 159

Conread position: 177-503
Cow position: chr15:11624410-11624734 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 30

Conread position: 178-491
Cow position: chr15:42320924-42320612 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 201
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 132, 88

Conread position: 179-465
Cow position: chr15:32672368-32672673 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 132

Conread position: 194-470
Cow position: chr15:4961152-4961420 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 62

Show alignments to all cow chromosomes.