Cow genome map

Conread name: rhlv16b_j11.y1

Conread position: 1-152
Cow position: chr16:18745466-18745622 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 59

Conread position: 1-154
Cow position: chr16:24209834-24209992 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-163
Cow position: chr16:26990376-26990543 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 93

Conread position: 1-169
Cow position: chr16:2394926-2394755 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 93

Conread position: 1-169
Cow position: chr16:18694408-18694581 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 93

Conread position: 1-172
Cow position: chr16:658524-658349 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 81

Conread position: 1-172
Cow position: chr16:1734302-1734127 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:2408330-2408506 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:3769447-3769622 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 1-172
Cow position: chr16:5435389-5435213 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:7673897-7674073 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:8813539-8813714 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:8871875-8872043 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 42

Conread position: 1-172
Cow position: chr16:10440803-10440627 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:11633280-11633456 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:12535384-12535550 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:15979814-15979990 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:21018123-21017947 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:23985877-23985700 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:24240836-24241012 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:34532858-34532682 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr16:40293606-40293782 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:43562831-43563007 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr16:43894698-43894874 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr16:45534026-45533850 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 93

Conread position: 1-172
Cow position: chr16:46102053-46102229 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 1-173
Cow position: chr16:701825-701647 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 1-173
Cow position: chr16:7155168-7154987 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 1-173
Cow position: chr16:8482056-8482233 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-173
Cow position: chr16:23533435-23533612 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1-173
Cow position: chr16:25964474-25964298 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 55

Conread position: 1-173
Cow position: chr16:43770587-43770764 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 93

Conread position: 1-173
Cow position: chr16:45608979-45608802 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 93

Conread position: 1-173
Cow position: chr16:46554986-46554809 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:4343341-4343519 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:4972961-4973141 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:5525535-5525720 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-176
Cow position: chr16:6264413-6264593 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 93

Conread position: 1-176
Cow position: chr16:7303320-7303140 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:13722025-13722206 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:14039989-14039810 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 85

Conread position: 1-176
Cow position: chr16:14100416-14100236 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr16:14570109-14569943 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 1-176
Cow position: chr16:15311845-15311667 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 47

Conread position: 1-176
Cow position: chr16:15812632-15812452 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:16150184-16150362 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 168

Conread position: 1-176
Cow position: chr16:18975432-18975253 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 131

Conread position: 1-176
Cow position: chr16:19081616-19081436 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:21189822-21189642 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:22799140-22799320 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:23875976-23876146 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr16:24407474-24407294 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 93

Conread position: 1-176
Cow position: chr16:24988153-24988333 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:26627316-26627136 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:27730817-27730997 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr16:28167754-28167934 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:42118307-42118136 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 95, 63

Conread position: 1-176
Cow position: chr16:42211060-42210880 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:45465353-45465533 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr16:48495572-48495752 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 101, 75

Conread position: 1-176
Cow position: chr16:50712875-50713055 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 154-421
Cow position: chr16:47562804-47563073 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 193

Conread position: 160-470
Cow position: chr16:26650559-26650869 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 112

Conread position: 167-491
Cow position: chr16:5660994-5661311 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 9, 93

Conread position: 169-468
Cow position: chr16:25187778-25188082 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 197
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 141, 175

Conread position: 169-503
Cow position: chr16:55111711-55111366 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 137, 113

Conread position: 172-397
Cow position: chr16:29091844-29091619 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 108

Conread position: 175-331
Cow position: chr16:41758325-41758175 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 75

Conread position: 175-405
Cow position: chr16:29676163-29675934 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 141

Conread position: 175-445
Cow position: chr16:6942765-6943040 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 180

Conread position: 175-460
Cow position: chr16:2411827-2411539 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 118, 57

Conread position: 175-465
Cow position: chr16:5651894-5652175 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 133, 68

Conread position: 175-468
Cow position: chr16:6549379-6549085 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 132, 57

Conread position: 175-470
Cow position: chr16:20255168-20254870 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 130, 167

Conread position: 175-470
Cow position: chr16:34529468-34529762 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 130, 103

Conread position: 175-470
Cow position: chr16:39820777-39821073 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 132, 98

Conread position: 175-491
Cow position: chr16:31890-32199 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 85

Conread position: 175-491
Cow position: chr16:5918627-5918944 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 85

Conread position: 175-495
Cow position: chr16:51685576-51685903 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 167

Conread position: 176-355
Cow position: chr16:23670451-23670271 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 125, 72

Conread position: 177-394
Cow position: chr16:52815489-52815272 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 158, 55

Conread position: 177-430
Cow position: chr16:54647471-54647718 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 176, 132

Conread position: 177-459
Cow position: chr16:56551273-56551554 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 22

Conread position: 177-495
Cow position: chr16:24155297-24154978 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 128

Conread position: 178-470
Cow position: chr16:28438639-28438346 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 258, 127

Conread position: 197-490
Cow position: chr16:42740255-42739963 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 143

Conread position: 222-483
Cow position: chr16:25294032-25294282 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 132, 41

Show alignments to all cow chromosomes.