Cow genome map
Conread name: | rhlv16b_j11.y1 |
Conread position: | 1-152 |
Cow position: | chr17:27791658-27791808 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 1-162 |
Cow position: | chr17:14212894-14213059 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 98, 75 |
Conread position: | 1-163 |
Cow position: | chr17:15140215-15140382 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-163 |
Cow position: | chr17:22249128-22249295 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-168 |
Cow position: | chr17:4635651-4635823 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-172 |
Cow position: | chr17:138732-138557 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 93, 131 |
Conread position: | 1-172 |
Cow position: | chr17:6262980-6262804 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr17:11084011-11084187 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr17:15328405-15328229 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 136 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr17:16854974-16855149 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 137 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 98, 17 |
Conread position: | 1-172 |
Cow position: | chr17:21767021-21766845 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 128 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-172 |
Cow position: | chr17:24026859-24027035 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 135 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr17:40810875-40810699 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-173 |
Cow position: | chr17:21770804-21770627 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:1784417-1784596 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 107, 93 |
Conread position: | 1-176 |
Cow position: | chr17:1970275-1970095 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:2265313-2265139 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 127 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 1-176 |
Cow position: | chr17:4480758-4480938 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:8222829-8222649 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 137 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-176 |
Cow position: | chr17:13921366-13921190 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:14029222-14029401 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-176 |
Cow position: | chr17:14932743-14932923 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:15438915-15438737 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:15809111-15808931 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 1-176 |
Cow position: | chr17:18099950-18100130 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-176 |
Cow position: | chr17:18777706-18777886 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:20546261-20546081 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:26829620-26829800 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:29824837-29825017 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 107, 93 |
Conread position: | 1-176 |
Cow position: | chr17:31232801-31232623 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr17:43471467-43471646 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 98, 68 |
Conread position: | 1-176 |
Cow position: | chr17:43991612-43991433 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 21-176 |
Cow position: | chr17:1654658-1654819 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 167-470 |
Cow position: | chr17:35591925-35592232 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 209 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 9, 183 |
Conread position: | 167-490 |
Cow position: | chr17:23857324-23856996 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 229 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 9, 60 |
Conread position: | 175-383 |
Cow position: | chr17:3710344-3710141 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 175-415 |
Cow position: | chr17:20088011-20087768 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 162 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 137, 73 |
Conread position: | 175-424 |
Cow position: | chr17:22429763-22429510 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 170 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 127, 171 |
Conread position: | 175-448 |
Cow position: | chr17:16889844-16890116 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 190 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 132, 57 |
Conread position: | 175-452 |
Cow position: | chr17:4295086-4295351 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 197 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 172, 86 |
Conread position: | 175-455 |
Cow position: | chr17:14217305-14217019 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 185 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 123, 103 |
Conread position: | 175-467 |
Cow position: | chr17:4671915-4672204 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 205 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 125, 17 |
Conread position: | 175-470 |
Cow position: | chr17:2287108-2287405 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 208 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 137, 68 |
Conread position: | 175-470 |
Cow position: | chr17:18185805-18185513 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 195 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 79, 93 |
Conread position: | 175-470 |
Cow position: | chr17:22160635-22160935 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 196 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-470 |
Cow position: | chr17:27345524-27345818 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 199 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 152, 119 |
Conread position: | 175-471 |
Cow position: | chr17:20183508-20183211 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 199 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 137, 57 |
Conread position: | 175-489 |
Cow position: | chr17:14893880-14894190 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 217 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 121, 169 |
Conread position: | 175-491 |
Cow position: | chr17:1383095-1382775 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 210 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-491 |
Cow position: | chr17:6089442-6089122 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 208 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 135, 169 |
Conread position: | 175-491 |
Cow position: | chr17:8208826-8209145 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 214 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 123, 103 |
Conread position: | 175-491 |
Cow position: | chr17:9653737-9653417 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 205 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 135, 169 |
Conread position: | 175-491 |
Cow position: | chr17:15143650-15143328 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 209 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 112, 171 |
Conread position: | 175-491 |
Cow position: | chr17:15435510-15435830 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 210 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 76, 85 |
Conread position: | 175-491 |
Cow position: | chr17:20666007-20665687 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 210 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-491 |
Cow position: | chr17:24633673-24633993 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 208 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 135, 169 |
Conread position: | 175-491 |
Cow position: | chr17:24780767-24781087 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 215 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 123, 103 |
Conread position: | 175-491 |
Cow position: | chr17:43988254-43988572 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 214 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-494 |
Cow position: | chr17:2261829-2262148 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 204 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 135, 73 |
Conread position: | 177-403 |
Cow position: | chr17:18192935-18193150 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 173, 53 |
Conread position: | 177-457 |
Cow position: | chr17:15381715-15381986 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 55 |
Conread position: | 177-465 |
Cow position: | chr17:42264240-42264517 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 202 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 139, 54 |
Show alignments to all cow chromosomes.