Cow genome map

Conread name: rhlv16b_j11.y1

Conread position: 1-152
Cow position: chr17:27791658-27791808 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 1-162
Cow position: chr17:14212894-14213059 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 75

Conread position: 1-163
Cow position: chr17:15140215-15140382 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-163
Cow position: chr17:22249128-22249295 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-168
Cow position: chr17:4635651-4635823 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr17:138732-138557 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 131

Conread position: 1-172
Cow position: chr17:6262980-6262804 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr17:11084011-11084187 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr17:15328405-15328229 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr17:16854974-16855149 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 17

Conread position: 1-172
Cow position: chr17:21767021-21766845 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr17:24026859-24027035 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr17:40810875-40810699 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-173
Cow position: chr17:21770804-21770627 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:1784417-1784596 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 93

Conread position: 1-176
Cow position: chr17:1970275-1970095 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:2265313-2265139 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 1-176
Cow position: chr17:4480758-4480938 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:8222829-8222649 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr17:13921366-13921190 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:14029222-14029401 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr17:14932743-14932923 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:15438915-15438737 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:15809111-15808931 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 1-176
Cow position: chr17:18099950-18100130 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr17:18777706-18777886 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:20546261-20546081 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:26829620-26829800 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:29824837-29825017 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 93

Conread position: 1-176
Cow position: chr17:31232801-31232623 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr17:43471467-43471646 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 68

Conread position: 1-176
Cow position: chr17:43991612-43991433 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 21-176
Cow position: chr17:1654658-1654819 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 167-470
Cow position: chr17:35591925-35592232 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 9, 183

Conread position: 167-490
Cow position: chr17:23857324-23856996 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 9, 60

Conread position: 175-383
Cow position: chr17:3710344-3710141 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 175-415
Cow position: chr17:20088011-20087768 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 137, 73

Conread position: 175-424
Cow position: chr17:22429763-22429510 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 127, 171

Conread position: 175-448
Cow position: chr17:16889844-16890116 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 132, 57

Conread position: 175-452
Cow position: chr17:4295086-4295351 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 172, 86

Conread position: 175-455
Cow position: chr17:14217305-14217019 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 185
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 123, 103

Conread position: 175-467
Cow position: chr17:4671915-4672204 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 125, 17

Conread position: 175-470
Cow position: chr17:2287108-2287405 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 137, 68

Conread position: 175-470
Cow position: chr17:18185805-18185513 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 93

Conread position: 175-470
Cow position: chr17:22160635-22160935 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 85

Conread position: 175-470
Cow position: chr17:27345524-27345818 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 152, 119

Conread position: 175-471
Cow position: chr17:20183508-20183211 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 137, 57

Conread position: 175-489
Cow position: chr17:14893880-14894190 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 121, 169

Conread position: 175-491
Cow position: chr17:1383095-1382775 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 85

Conread position: 175-491
Cow position: chr17:6089442-6089122 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 169

Conread position: 175-491
Cow position: chr17:8208826-8209145 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 103

Conread position: 175-491
Cow position: chr17:9653737-9653417 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 169

Conread position: 175-491
Cow position: chr17:15143650-15143328 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 112, 171

Conread position: 175-491
Cow position: chr17:15435510-15435830 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 76, 85

Conread position: 175-491
Cow position: chr17:20666007-20665687 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 85

Conread position: 175-491
Cow position: chr17:24633673-24633993 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 169

Conread position: 175-491
Cow position: chr17:24780767-24781087 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 123, 103

Conread position: 175-491
Cow position: chr17:43988254-43988572 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 85

Conread position: 175-494
Cow position: chr17:2261829-2262148 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 204
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 135, 73

Conread position: 177-403
Cow position: chr17:18192935-18193150 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 173, 53

Conread position: 177-457
Cow position: chr17:15381715-15381986 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 55

Conread position: 177-465
Cow position: chr17:42264240-42264517 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 139, 54

Show alignments to all cow chromosomes.