Cow genome map

Conread name: rhlv16b_j11.y1

Conread position: 1-133
Cow position: chr19:44839816-44839954 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 1-154
Cow position: chr19:776866-776708 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-169
Cow position: chr19:435985-436157 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 131

Conread position: 1-169
Cow position: chr19:16478514-16478686 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 1-169
Cow position: chr19:36351622-36351455 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 82

Conread position: 1-170
Cow position: chr19:40849136-40849309 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 150

Conread position: 1-172
Cow position: chr19:175821-175645 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr19:2269948-2270124 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr19:28596729-28596553 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr19:28794972-28795142 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 52

Conread position: 1-172
Cow position: chr19:39182187-39182363 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr19:40791003-40791179 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 1-173
Cow position: chr19:47670263-47670086 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr19:5902380-5902200 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr19:7345387-7345207 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr19:16316854-16317035 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 1-176
Cow position: chr19:20403637-20403456 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 93

Conread position: 1-176
Cow position: chr19:25571806-25571986 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr19:39394554-39394374 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr19:39750566-39750396 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 46

Conread position: 1-176
Cow position: chr19:55164304-55164484 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-218
Cow position: chr19:444582-444802 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 131

Conread position: 18-172
Cow position: chr19:197344-197189 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 95

Conread position: 164-338
Cow position: chr19:561584-561408 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 146, 11

Conread position: 167-483
Cow position: chr19:359580-359266 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 143, 8

Conread position: 168-420
Cow position: chr19:18728780-18729031 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 83

Conread position: 169-309
Cow position: chr19:536798-536936 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 175-391
Cow position: chr19:29209492-29209711 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 167

Conread position: 175-454
Cow position: chr19:55078677-55078961 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 135, 169

Conread position: 175-462
Cow position: chr19:32665461-32665753 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 137, 180

Conread position: 175-463
Cow position: chr19:34351-34640 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 159, 136

Conread position: 175-465
Cow position: chr19:30755109-30755406 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 127, 98

Conread position: 175-468
Cow position: chr19:6553544-6553832 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 177, 57

Conread position: 175-469
Cow position: chr19:170809-170517 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 57

Conread position: 175-470
Cow position: chr19:350352-350060 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 175, 189

Conread position: 175-470
Cow position: chr19:7341999-7342299 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 169

Conread position: 175-470
Cow position: chr19:32212139-32211842 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 136

Conread position: 175-475
Cow position: chr19:20111293-20111014 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 131, 56

Conread position: 175-491
Cow position: chr19:28593208-28593528 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 208
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 118

Conread position: 175-491
Cow position: chr19:32244615-32244935 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 79, 85

Conread position: 175-491
Cow position: chr19:43143647-43143967 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 85

Conread position: 175-497
Cow position: chr19:42248746-42249062 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 64

Conread position: 177-457
Cow position: chr19:32223506-32223229 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 77, 85

Conread position: 178-454
Cow position: chr19:543692-543411 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 126, 116

Show alignments to all cow chromosomes.