Cow genome map
Conread name: | rhlv16b_j11.y1 |
Conread position: | 1-106 |
Cow position: | chr21:46831140-46831246 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 89 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 1-141 |
Cow position: | chr21:39400662-39400522 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 60, 86 |
Conread position: | 1-151 |
Cow position: | chr21:37122988-37123145 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 57, 52 |
Conread position: | 1-152 |
Cow position: | chr21:4898538-4898694 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-154 |
Cow position: | chr21:27375532-27375373 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 99, 115 |
Conread position: | 1-163 |
Cow position: | chr21:19627282-19627448 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 98, 85 |
Conread position: | 1-169 |
Cow position: | chr21:2664739-2664909 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 93, 148 |
Conread position: | 1-169 |
Cow position: | chr21:27608276-27608447 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 98, 49 |
Conread position: | 1-169 |
Cow position: | chr21:30595664-30595837 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-169 |
Cow position: | chr21:47360743-47360916 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-170 |
Cow position: | chr21:6864134-6864303 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 73, 87 |
Conread position: | 1-172 |
Cow position: | chr21:149573-149397 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr21:2768417-2768593 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 126 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-172 |
Cow position: | chr21:3782199-3782023 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr21:3804354-3804530 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 55, 59 |
Conread position: | 1-172 |
Cow position: | chr21:10570713-10570537 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 107, 92 |
Conread position: | 1-172 |
Cow position: | chr21:17144114-17143939 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 93, 170 |
Conread position: | 1-172 |
Cow position: | chr21:28915549-28915719 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 93, 139 |
Conread position: | 1-172 |
Cow position: | chr21:31512844-31513019 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 107, 93 |
Conread position: | 1-172 |
Cow position: | chr21:36534782-36534958 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr21:43404011-43404187 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-173 |
Cow position: | chr21:4035836-4036014 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-173 |
Cow position: | chr21:4812912-4813088 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 93, 65 |
Conread position: | 1-173 |
Cow position: | chr21:28259095-28258919 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 127 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 98, 24 |
Conread position: | 1-173 |
Cow position: | chr21:39428828-39428651 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-173 |
Cow position: | chr21:44219105-44218924 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 107, 93 |
Conread position: | 1-176 |
Cow position: | chr21:449594-449414 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:2514277-2514097 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:4188962-4188782 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 128 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 107, 75 |
Conread position: | 1-176 |
Cow position: | chr21:6966046-6966226 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:9895788-9895608 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 136 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:11509367-11509187 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:14727113-14726937 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 104, 69 |
Conread position: | 1-176 |
Cow position: | chr21:18285232-18285051 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 139 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 98, 154 |
Conread position: | 1-176 |
Cow position: | chr21:18846908-18847088 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:19351435-19351615 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:22463617-22463437 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 146 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:22855339-22855159 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 143 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:25472625-25472445 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 98, 62 |
Conread position: | 1-176 |
Cow position: | chr21:27342972-27343153 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 95, 153 |
Conread position: | 1-176 |
Cow position: | chr21:28476381-28476561 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 134 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:30966517-30966697 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:33983849-33984028 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 145 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 98, 159 |
Conread position: | 1-176 |
Cow position: | chr21:34180671-34180851 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 104, 93 |
Conread position: | 1-176 |
Cow position: | chr21:36506412-36506592 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:41796295-41796475 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr21:42917219-42917040 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 98, 169 |
Conread position: | 1-176 |
Cow position: | chr21:47532160-47531983 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 135 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 65, 130 |
Conread position: | 1-176 |
Cow position: | chr21:47977693-47977513 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-179 |
Cow position: | chr21:33965293-33965477 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 138 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-504 |
Cow position: | chr21:37147358-37147849 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 58 |
Conread position: | 3-176 |
Cow position: | chr21:18824246-18824424 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 141 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 160-470 |
Cow position: | chr21:4456818-4457133 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 213 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 15, 135 |
Conread position: | 170-465 |
Cow position: | chr21:3194398-3194680 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 62 |
Conread position: | 172-363 |
Cow position: | chr21:21517207-21517389 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 153 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 172-495 |
Cow position: | chr21:993012-992697 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 22 |
Conread position: | 175-390 |
Cow position: | chr21:3615299-3615519 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 156 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 137, 164 |
Conread position: | 175-416 |
Cow position: | chr21:2716674-2716429 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 169 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 137, 57 |
Conread position: | 175-439 |
Cow position: | chr21:25992620-25992357 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 179 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 137, 98 |
Conread position: | 175-440 |
Cow position: | chr21:34259212-34258953 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 179 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 94, 57 |
Conread position: | 175-464 |
Cow position: | chr21:4222680-4222387 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 203 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 137, 176 |
Conread position: | 175-470 |
Cow position: | chr21:1292170-1291884 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 201 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 182, 57 |
Conread position: | 175-470 |
Cow position: | chr21:2788984-2788685 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 212 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 132, 167 |
Conread position: | 175-470 |
Cow position: | chr21:8678353-8678053 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 196 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 135, 169 |
Conread position: | 175-470 |
Cow position: | chr21:11505594-11505894 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 202 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-470 |
Cow position: | chr21:13123992-13123699 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 205 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 90, 136 |
Conread position: | 175-470 |
Cow position: | chr21:35596375-35596675 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 207 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 125, 169 |
Conread position: | 175-470 |
Cow position: | chr21:37044920-37045217 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 194 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-490 |
Cow position: | chr21:4076852-4077165 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 214 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 137, 68 |
Conread position: | 175-491 |
Cow position: | chr21:2476503-2476200 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 206 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 79, 57 |
Conread position: | 175-491 |
Cow position: | chr21:6339573-6339893 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 210 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 135, 169 |
Conread position: | 175-491 |
Cow position: | chr21:11453649-11453329 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 212 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-491 |
Cow position: | chr21:12055993-12055674 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 210 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-491 |
Cow position: | chr21:39425070-39425390 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 207 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 175-503 |
Cow position: | chr21:23601206-23601534 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 30 |
Conread position: | 176-468 |
Cow position: | chr21:2416244-2416531 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 204 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 129, 67 |
Conread position: | 177-470 |
Cow position: | chr21:3426494-3426792 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 195 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 177-470 |
Cow position: | chr21:36714642-36714937 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 201 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 131, 59 |
Conread position: | 189-451 |
Cow position: | chr21:21947781-21947515 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 191 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 131, 115 |
Show alignments to all cow chromosomes.