Cow genome map

Conread name: rhlv16b_j11.y1

Conread position: 1-146
Cow position: chr28:24488092-24488242 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 1-154
Cow position: chr28:23615436-23615278 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 1-154
Cow position: chr28:33688887-33688733 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 93

Conread position: 1-165
Cow position: chr28:2280610-2280777 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 73

Conread position: 1-168
Cow position: chr28:14666438-14666267 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 98, 65

Conread position: 1-172
Cow position: chr28:4958207-4958387 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1-172
Cow position: chr28:5211415-5211239 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr28:5748413-5748589 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr28:6047089-6046913 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 93

Conread position: 1-172
Cow position: chr28:6776710-6776886 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr28:7744390-7744220 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 1-172
Cow position: chr28:8971370-8971194 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr28:12155134-12154958 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr28:13463256-13463080 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr28:16181661-16181485 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr28:17391726-17391550 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 1-172
Cow position: chr28:20935119-20935295 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr28:34597537-34597361 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 1-176
Cow position: chr28:444701-444521 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr28:1197421-1197240 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 69, 87

Conread position: 1-176
Cow position: chr28:7336276-7336096 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr28:7829799-7829619 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr28:10303131-10302951 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 104, 93

Conread position: 1-176
Cow position: chr28:15604910-15604724 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr28:17030802-17030979 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 98, 161

Conread position: 1-176
Cow position: chr28:20967376-20967556 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr28:21379786-21379619 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-176
Cow position: chr28:21896575-21896395 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr28:24886153-24885973 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr28:25701644-25701823 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 142

Conread position: 1-176
Cow position: chr28:28357491-28357671 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr28:28929126-28928949 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-177
Cow position: chr28:28184684-28184496 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 1-223
Cow position: chr28:1198488-1198260 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 51-173
Cow position: chr28:25596146-25596019 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 160-337
Cow position: chr28:17311775-17311961 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 167-369
Cow position: chr28:32331536-32331329 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 175-415
Cow position: chr28:10591498-10591263 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 106, 126

Conread position: 175-446
Cow position: chr28:15585269-15585536 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 65, 120

Conread position: 175-454
Cow position: chr28:15950860-15951142 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 85

Conread position: 175-464
Cow position: chr28:7901230-7901527 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 57

Conread position: 175-468
Cow position: chr28:2591795-2592091 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 137, 57

Conread position: 175-470
Cow position: chr28:9155406-9155101 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 57

Conread position: 175-490
Cow position: chr28:9954015-9954330 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 20

Conread position: 175-491
Cow position: chr28:7822136-7822456 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 85

Conread position: 175-491
Cow position: chr28:13440998-13440678 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 85

Conread position: 175-491
Cow position: chr28:14750427-14750745 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 119

Conread position: 175-491
Cow position: chr28:24587312-24587633 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 85

Conread position: 176-470
Cow position: chr28:9137169-9136873 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 78, 56

Conread position: 177-437
Cow position: chr28:1387514-1387249 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 167

Conread position: 177-468
Cow position: chr28:1953011-1953306 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 121

Conread position: 177-470
Cow position: chr28:8721568-8721269 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 150, 134

Conread position: 178-457
Cow position: chr28:11027072-11026801 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 152, 49

Conread position: 194-495
Cow position: chr28:18102036-18101740 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 102

Show alignments to all cow chromosomes.