Cow genome map

Conread name: rhlv16b_j11.y1

Conread position: 1-146
Cow position: chr29:14313885-14314035 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 1-149
Cow position: chr29:10159452-10159604 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 75

Conread position: 1-154
Cow position: chr29:31094321-31094480 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 1-155
Cow position: chr29:4864583-4864428 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 98, 59

Conread position: 1-163
Cow position: chr29:16012910-16013074 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 98, 53

Conread position: 1-164
Cow position: chr29:39076455-39076622 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-169
Cow position: chr29:3584948-3585121 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 104, 93

Conread position: 1-169
Cow position: chr29:10452552-10452724 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 151

Conread position: 1-172
Cow position: chr29:2103111-2102935 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr29:2463608-2463784 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr29:2838072-2838248 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 107, 93

Conread position: 1-172
Cow position: chr29:7427878-7428054 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 107, 93

Conread position: 1-172
Cow position: chr29:10820451-10820627 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr29:16101854-16102029 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 85

Conread position: 1-172
Cow position: chr29:19620005-19620180 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 124

Conread position: 1-172
Cow position: chr29:26161569-26161745 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr29:28697115-28697290 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 122

Conread position: 1-172
Cow position: chr29:31765304-31765128 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr29:32543402-32543226 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chr29:34794599-34794775 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr29:38229271-38229095 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr29:40954631-40954807 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position: chr29:45462497-45462321 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 1-173
Cow position: chr29:6872018-6872187 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 10

Conread position: 1-173
Cow position: chr29:9079533-9079712 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1-173
Cow position: chr29:17138372-17138195 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 35

Conread position: 1-173
Cow position: chr29:32800539-32800363 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 11

Conread position: 1-173
Cow position: chr29:32962579-32962401 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 1-173
Cow position: chr29:36634085-36634263 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 129

Conread position: 1-176
Cow position: chr29:408000-408180 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-176
Cow position: chr29:3329856-3329676 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr29:4163952-4163772 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr29:7701126-7701301 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 46

Conread position: 1-176
Cow position: chr29:12797846-12797668 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 137

Conread position: 1-176
Cow position: chr29:15117562-15117742 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr29:15943616-15943437 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-176
Cow position: chr29:19890832-19890652 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr29:21474413-21474233 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr29:24577917-24577736 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 1-176
Cow position: chr29:27702341-27702161 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr29:28657104-28657284 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1-176
Cow position: chr29:35956038-35956218 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 93

Conread position: 1-177
Cow position: chr29:34780722-34780903 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-187
Cow position: chr29:36208960-36208770 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 0

Conread position: 5-173
Cow position: chr29:16052096-16052268 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 94, 18

Conread position: 167-470
Cow position: chr29:7840632-7840940 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 200
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 96

Conread position: 172-481
Cow position: chr29:24198780-24198465 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 168

Conread position: 175-335
Cow position: chr29:34609107-34608948 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 175-412
Cow position: chr29:5983335-5983094 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 130, 57

Conread position: 175-438
Cow position: chr29:28060821-28060552 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 170

Conread position: 175-440
Cow position: chr29:11855443-11855709 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 124, 110

Conread position: 175-463
Cow position: chr29:15969306-15969014 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 186
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 135, 164

Conread position: 175-463
Cow position: chr29:27981073-27980780 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 185
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 135, 180

Conread position: 175-468
Cow position: chr29:19652953-19653250 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 89, 132

Conread position: 175-470
Cow position: chr29:104418-104711 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 115

Conread position: 175-470
Cow position: chr29:2841524-2841229 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 170

Conread position: 175-470
Cow position: chr29:5957447-5957748 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 127, 169

Conread position: 175-470
Cow position: chr29:11049127-11049422 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 93

Conread position: 175-470
Cow position: chr29:11841511-11841806 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 136, 22

Conread position: 175-491
Cow position: chr29:610767-610448 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 123, 65

Conread position: 175-491
Cow position: chr29:15895006-15894686 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 204
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 180

Conread position: 175-491
Cow position: chr29:19884914-19885234 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 206
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 112, 169

Conread position: 175-491
Cow position: chr29:35296719-35297038 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 85

Conread position: 177-470
Cow position: chr29:13853175-13852881 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 133, 52

Conread position: 177-470
Cow position: chr29:32315887-32316185 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 84

Conread position: 197-402
Cow position: chr29:13648284-13648486 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 39

Show alignments to all cow chromosomes.