Cow genome map
Conread name: | rhlv16b_j11.y1 |
Conread position: | 1-146 |
Cow position: | chr29:14313885-14314035 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-149 |
Cow position: | chr29:10159452-10159604 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 98, 75 |
Conread position: | 1-154 |
Cow position: | chr29:31094321-31094480 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 1-155 |
Cow position: | chr29:4864583-4864428 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 98, 59 |
Conread position: | 1-163 |
Cow position: | chr29:16012910-16013074 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 98, 53 |
Conread position: | 1-164 |
Cow position: | chr29:39076455-39076622 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-169 |
Cow position: | chr29:3584948-3585121 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 132 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 104, 93 |
Conread position: | 1-169 |
Cow position: | chr29:10452552-10452724 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 93, 151 |
Conread position: | 1-172 |
Cow position: | chr29:2103111-2102935 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr29:2463608-2463784 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-172 |
Cow position: | chr29:2838072-2838248 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 138 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 107, 93 |
Conread position: | 1-172 |
Cow position: | chr29:7427878-7428054 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 107, 93 |
Conread position: | 1-172 |
Cow position: | chr29:10820451-10820627 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr29:16101854-16102029 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 93, 85 |
Conread position: | 1-172 |
Cow position: | chr29:19620005-19620180 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 128 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 93, 124 |
Conread position: | 1-172 |
Cow position: | chr29:26161569-26161745 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr29:28697115-28697290 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 93, 122 |
Conread position: | 1-172 |
Cow position: | chr29:31765304-31765128 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-172 |
Cow position: | chr29:32543402-32543226 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-172 |
Cow position: | chr29:34794599-34794775 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr29:38229271-38229095 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr29:40954631-40954807 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 135 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-172 |
Cow position: | chr29:45462497-45462321 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-173 |
Cow position: | chr29:6872018-6872187 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 105, 10 |
Conread position: | 1-173 |
Cow position: | chr29:9079533-9079712 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-173 |
Cow position: | chr29:17138372-17138195 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 28, 35 |
Conread position: | 1-173 |
Cow position: | chr29:32800539-32800363 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 71, 11 |
Conread position: | 1-173 |
Cow position: | chr29:32962579-32962401 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 144 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 1-173 |
Cow position: | chr29:36634085-36634263 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 90, 129 |
Conread position: | 1-176 |
Cow position: | chr29:408000-408180 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 137 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-176 |
Cow position: | chr29:3329856-3329676 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr29:4163952-4163772 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr29:7701126-7701301 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 109, 46 |
Conread position: | 1-176 |
Cow position: | chr29:12797846-12797668 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 140 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 98, 137 |
Conread position: | 1-176 |
Cow position: | chr29:15117562-15117742 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr29:15943616-15943437 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 126 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 1-176 |
Cow position: | chr29:19890832-19890652 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr29:21474413-21474233 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr29:24577917-24577736 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 140 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 1-176 |
Cow position: | chr29:27702341-27702161 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 138 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr29:28657104-28657284 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 136 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-176 |
Cow position: | chr29:35956038-35956218 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 104, 93 |
Conread position: | 1-177 |
Cow position: | chr29:34780722-34780903 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-187 |
Cow position: | chr29:36208960-36208770 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 144 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 5-173 |
Cow position: | chr29:16052096-16052268 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 94, 18 |
Conread position: | 167-470 |
Cow position: | chr29:7840632-7840940 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 200 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 11, 96 |
Conread position: | 172-481 |
Cow position: | chr29:24198780-24198465 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 168 |
Conread position: | 175-335 |
Cow position: | chr29:34609107-34608948 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 115 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 175-412 |
Cow position: | chr29:5983335-5983094 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 162 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 130, 57 |
Conread position: | 175-438 |
Cow position: | chr29:28060821-28060552 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 176 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 90, 170 |
Conread position: | 175-440 |
Cow position: | chr29:11855443-11855709 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 198 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 124, 110 |
Conread position: | 175-463 |
Cow position: | chr29:15969306-15969014 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 186 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 135, 164 |
Conread position: | 175-463 |
Cow position: | chr29:27981073-27980780 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 185 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 135, 180 |
Conread position: | 175-468 |
Cow position: | chr29:19652953-19653250 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 203 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 89, 132 |
Conread position: | 175-470 |
Cow position: | chr29:104418-104711 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 115 |
Conread position: | 175-470 |
Cow position: | chr29:2841524-2841229 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 205 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 112, 170 |
Conread position: | 175-470 |
Cow position: | chr29:5957447-5957748 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 200 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 127, 169 |
Conread position: | 175-470 |
Cow position: | chr29:11049127-11049422 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 210 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 141, 93 |
Conread position: | 175-470 |
Cow position: | chr29:11841511-11841806 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 206 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 136, 22 |
Conread position: | 175-491 |
Cow position: | chr29:610767-610448 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 210 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 123, 65 |
Conread position: | 175-491 |
Cow position: | chr29:15895006-15894686 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 204 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 135, 180 |
Conread position: | 175-491 |
Cow position: | chr29:19884914-19885234 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 206 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 112, 169 |
Conread position: | 175-491 |
Cow position: | chr29:35296719-35297038 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 210 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 177-470 |
Cow position: | chr29:13853175-13852881 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 197 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 133, 52 |
Conread position: | 177-470 |
Cow position: | chr29:32315887-32316185 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 195 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 107, 84 |
Conread position: | 197-402 |
Cow position: | chr29:13648284-13648486 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 140 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 39 |
Show alignments to all cow chromosomes.