Cow genome map
| Conread name: | rhlv23b_j22.y1 |
| Conread position: | 334-578 |
| Cow position: | chr1:71665985-71665739 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 335-579 |
| Cow position: | chr1:65318525-65318773 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 339-583 |
| Cow position: | chr1:78066584-78066343 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 339-586 |
| Cow position: | chr1:64572468-64572717 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 164, 24 |
| Conread position: | 340-492 |
| Cow position: | chr1:85647825-85647677 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 340-577 |
| Cow position: | chr1:86682606-86682373 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 340-586 |
| Cow position: | chr1:43505480-43505727 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 21, 156 |
| Conread position: | 340-586 |
| Cow position: | chr1:90621553-90621303 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 108, 201 |
| Conread position: | 340-586 |
| Cow position: | chr1:91023512-91023265 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 154, 68 |
| Conread position: | 341-575 |
| Cow position: | chr1:71079000-71078770 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 341-576 |
| Cow position: | chr1:34856673-34856432 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 341-576 |
| Cow position: | chr1:45223537-45223769 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 341-579 |
| Cow position: | chr1:43352700-43352457 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 153, 80 |
| Conread position: | 341-580 |
| Cow position: | chr1:22525833-22526071 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 341-580 |
| Cow position: | chr1:80584388-80584625 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 153, 33 |
| Conread position: | 341-580 |
| Cow position: | chr1:95072287-95072540 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 341-583 |
| Cow position: | chr1:44506926-44507168 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 341-583 |
| Cow position: | chr1:50931019-50930780 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 158, 34 |
| Conread position: | 341-584 |
| Cow position: | chr1:8574-8819 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 142, 19 |
| Conread position: | 341-585 |
| Cow position: | chr1:54258520-54258771 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 118 |
| Conread position: | 341-586 |
| Cow position: | chr1:83072395-83072647 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 342-586 |
| Cow position: | chr1:100474190-100474442 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 134, 34 |
| Conread position: | 344-578 |
| Cow position: | chr1:95835838-95835600 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 155, 34 |
| Conread position: | 345-575 |
| Cow position: | chr1:89381235-89381466 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 156, 22 |
| Conread position: | 346-477 |
| Cow position: | chr1:20204989-20205117 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 346-492 |
| Cow position: | chr1:52467263-52467408 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 99, 85 |
| Conread position: | 346-492 |
| Cow position: | chr1:98551678-98551824 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 346-507 |
| Cow position: | chr1:81613348-81613512 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 346-509 |
| Cow position: | chr1:45553282-45553118 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 346-511 |
| Cow position: | chr1:22827116-22827282 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 346-517 |
| Cow position: | chr1:7023080-7023254 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 346-519 |
| Cow position: | chr1:71253591-71253421 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 148, 9 |
| Conread position: | 346-521 |
| Cow position: | chr1:100800314-100800488 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 346-522 |
| Cow position: | chr1:18780376-18780191 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 346-543 |
| Cow position: | chr1:52039594-52039793 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 346-560 |
| Cow position: | chr1:87197777-87197997 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 346-571 |
| Cow position: | chr1:89158168-89157942 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 150 |
| Conread position: | 346-574 |
| Cow position: | chr1:17196668-17196434 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 346-575 |
| Cow position: | chr1:85771970-85772198 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 196, 19 |
| Conread position: | 346-576 |
| Cow position: | chr1:58754834-58754605 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 155, 26 |
| Conread position: | 346-577 |
| Cow position: | chr1:97090285-97090511 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 346-578 |
| Cow position: | chr1:98060011-98060254 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 346-580 |
| Cow position: | chr1:70828861-70829093 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 346-580 |
| Cow position: | chr1:79003935-79004173 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 346-580 |
| Cow position: | chr1:90904795-90904560 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 155, 21 |
| Conread position: | 346-583 |
| Cow position: | chr1:35671504-35671736 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 346-583 |
| Cow position: | chr1:40600002-40600225 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 346-583 |
| Cow position: | chr1:41056638-41056879 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 145, 26 |
| Conread position: | 346-583 |
| Cow position: | chr1:48206574-48206340 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 346-583 |
| Cow position: | chr1:56618689-56618456 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 148, 25 |
| Conread position: | 346-583 |
| Cow position: | chr1:78810999-78811238 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 150, 29 |
| Conread position: | 346-583 |
| Cow position: | chr1:79146859-79146614 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 346-583 |
| Cow position: | chr1:101860528-101860287 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 117, 85 |
| Conread position: | 346-585 |
| Cow position: | chr1:89509962-89509726 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 346-586 |
| Cow position: | chr1:197046-196803 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 346-586 |
| Cow position: | chr1:1981153-1980907 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 346-586 |
| Cow position: | chr1:56225428-56225669 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 346-586 |
| Cow position: | chr1:61742008-61741761 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 85 |
| Conread position: | 346-586 |
| Cow position: | chr1:61884874-61885115 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 150, 9 |
| Conread position: | 346-586 |
| Cow position: | chr1:78096886-78097127 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 148, 231 |
| Conread position: | 346-586 |
| Cow position: | chr1:79640329-79640086 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 346-586 |
| Cow position: | chr1:81290465-81290707 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 346-586 |
| Cow position: | chr1:81481423-81481182 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 148, 179 |
| Conread position: | 346-586 |
| Cow position: | chr1:81569070-81568826 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 346-586 |
| Cow position: | chr1:82537896-82538130 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 45 |
| Conread position: | 346-586 |
| Cow position: | chr1:84811981-84811738 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 346-586 |
| Cow position: | chr1:88913280-88913524 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 346-586 |
| Cow position: | chr1:89388299-89388546 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 346-586 |
| Cow position: | chr1:102529895-102529650 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 347-492 |
| Cow position: | chr1:89230269-89230126 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 347-576 |
| Cow position: | chr1:64113832-64113607 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 149 |
| Conread position: | 347-583 |
| Cow position: | chr1:22729014-22729254 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 227 |
| Conread position: | 347-583 |
| Cow position: | chr1:29935424-29935191 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 145, 45 |
| Conread position: | 347-586 |
| Cow position: | chr1:82513393-82513149 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 347-586 |
| Cow position: | chr1:102306180-102305944 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 152, 63 |
| Conread position: | 348-506 |
| Cow position: | chr1:89349926-89350083 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 348-509 |
| Cow position: | chr1:65028495-65028658 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 348-552 |
| Cow position: | chr1:96277090-96276884 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 348-574 |
| Cow position: | chr1:43389087-43388863 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 144, 80 |
| Conread position: | 348-586 |
| Cow position: | chr1:52912935-52912689 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 146, 30 |
| Conread position: | 349-586 |
| Cow position: | chr1:75744824-75745063 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 350-575 |
| Cow position: | chr1:55705284-55705055 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 350-577 |
| Cow position: | chr1:101634674-101634893 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 350-583 |
| Cow position: | chr1:24133096-24132863 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 149, 25 |
| Conread position: | 350-583 |
| Cow position: | chr1:67654356-67654125 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 350-586 |
| Cow position: | chr1:61012277-61012509 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 351-492 |
| Cow position: | chr1:12978646-12978787 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 351-577 |
| Cow position: | chr1:100762041-100762268 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 69 |
| Conread position: | 351-580 |
| Cow position: | chr1:89158737-89158511 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 351-586 |
| Cow position: | chr1:20104229-20104469 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 351-586 |
| Cow position: | chr1:25383633-25383872 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 140, 45 |
| Conread position: | 352-506 |
| Cow position: | chr1:4581365-4581212 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 352-561 |
| Cow position: | chr1:13637698-13637487 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 352-576 |
| Cow position: | chr1:101714085-101714309 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 352-583 |
| Cow position: | chr1:54206849-54206619 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 143, 75 |
| Conread position: | 352-586 |
| Cow position: | chr1:22192734-22192973 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 139, 161 |
| Conread position: | 353-573 |
| Cow position: | chr1:98030888-98031105 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 354-583 |
| Cow position: | chr1:71295330-71295104 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 8, 145 |
| Conread position: | 355-574 |
| Cow position: | chr1:95499529-95499305 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 355-576 |
| Cow position: | chr1:62034862-62034642 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 355-586 |
| Cow position: | chr1:35162375-35162608 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 189 |
| Conread position: | 355-586 |
| Cow position: | chr1:82936628-82936402 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 356-579 |
| Cow position: | chr1:97954499-97954287 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 356-586 |
| Cow position: | chr1:42175691-42175931 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 357-502 |
| Cow position: | chr1:82556439-82556298 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 357-520 |
| Cow position: | chr1:77232608-77232442 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 357-520 |
| Cow position: | chr1:81580147-81580313 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 357-583 |
| Cow position: | chr1:57575794-57575564 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 357-586 |
| Cow position: | chr1:98911979-98912211 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 134, 10 |
| Conread position: | 358-583 |
| Cow position: | chr1:41027046-41027272 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 141, 70 |
| Conread position: | 358-586 |
| Cow position: | chr1:78857358-78857123 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 358-586 |
| Cow position: | chr1:93499589-93499822 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 359-578 |
| Cow position: | chr1:8287659-8287435 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 359-586 |
| Cow position: | chr1:86110763-86110542 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 142, 10 |
| Conread position: | 360-577 |
| Cow position: | chr1:54267964-54267746 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 141, 63 |
| Conread position: | 360-585 |
| Cow position: | chr1:83025189-83024963 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 124, 9 |
| Conread position: | 361-495 |
| Cow position: | chr1:19227081-19226949 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 361-507 |
| Cow position: | chr1:31855273-31855127 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-583 |
| Cow position: | chr1:27959574-27959347 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 144, 70 |
| Conread position: | 364-586 |
| Cow position: | chr1:70538588-70538809 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 366-577 |
| Cow position: | chr1:24530481-24530692 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 366-578 |
| Cow position: | chr1:53452515-53452716 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 368-586 |
| Cow position: | chr1:11172356-11172571 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 369-583 |
| Cow position: | chr1:10633028-10633240 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 369-586 |
| Cow position: | chr1:42887296-42887077 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 369-586 |
| Cow position: | chr1:55753233-55753016 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 370-586 |
| Cow position: | chr1:26934286-26934065 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 375-583 |
| Cow position: | chr1:759430-759212 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 375-586 |
| Cow position: | chr1:45315648-45315428 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 379-583 |
| Cow position: | chr1:41138152-41137948 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 380-582 |
| Cow position: | chr1:66752636-66752433 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 113, 145 |
| Conread position: | 380-585 |
| Cow position: | chr1:61011174-61011377 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 382-583 |
| Cow position: | chr1:100573633-100573428 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 385-586 |
| Cow position: | chr1:7965851-7966050 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 392-586 |
| Cow position: | chr1:71636320-71636125 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 392-586 |
| Cow position: | chr1:98583757-98583951 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 117 |
| Conread position: | 393-586 |
| Cow position: | chr1:70483328-70483132 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 394-577 |
| Cow position: | chr1:91743453-91743269 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 38 |
| Conread position: | 396-583 |
| Cow position: | chr1:55685969-55685778 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 126 |
| Conread position: | 396-586 |
| Cow position: | chr1:524817-525009 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 397-583 |
| Cow position: | chr1:50585868-50585676 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 400-580 |
| Cow position: | chr1:42774924-42775103 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 94, 7 |
| Conread position: | 404-579 |
| Cow position: | chr1:102730745-102730561 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 406-583 |
| Cow position: | chr1:62469080-62469258 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 406-586 |
| Cow position: | chr1:4329881-4329706 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 406-586 |
| Cow position: | chr1:102523622-102523437 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 84, 143 |
| Conread position: | 408-586 |
| Cow position: | chr1:11708997-11708821 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 425-586 |
| Cow position: | chr1:10470464-10470625 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-586 |
| Cow position: | chr1:19384415-19384254 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.