Cow genome map


           Conread name:
           rhlv23b_j22.y1
        

               Conread position:
               334-582
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               219, 22
               

               Conread position:
               338-586
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               156, 31
               

               Conread position:
               339-519
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               147, 137
               

               Conread position:
               339-578
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               157, 43
               

               Conread position:
               339-583
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               340-583
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               105, 14
               

               Conread position:
               341-492
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               341-579
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               341-580
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               226, 26
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               166, 7
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               142, 71
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               341-585
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               341-585
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               342-580
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               342-580
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               12, 142
               

               Conread position:
               346-490
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               346-521
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               346-549
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               346-576
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               346-577
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               346-579
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 114
               

               Conread position:
               346-584
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               155, 81
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 133
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               230, 26
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               164, 23
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               148, 178
               

               Conread position:
               347-521
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               347-586
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               347-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               78, 22
               

               Conread position:
               348-507
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               348-580
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               144, 53
               

               Conread position:
               348-583
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               151, 27
               

               Conread position:
               349-583
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 177
               

               Conread position:
               349-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               21, 214
               

               Conread position:
               350-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 177
               

               Conread position:
               350-586
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 78
               

               Conread position:
               353-492
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 18
               

               Conread position:
               353-586
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               5, 64
               

               Conread position:
               354-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 162
               

               Conread position:
               356-586
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               143, 18
               

               Conread position:
               357-583
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               357-586
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               144, 166
               

               Conread position:
               358-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               358-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               136, 180
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               359-471
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               359-586
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 222
               

               Conread position:
               360-520
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 7
               

               Conread position:
               362-586
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               363-503
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               364-586
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               112, 172
               

               Conread position:
               366-586
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               369-579
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               369-586
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               42, 158
               

               Conread position:
               381-586
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               129, 113
               

               Conread position:
               384-581
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               385-583
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 144
               

               Conread position:
               386-583
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               386-586
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               395-583
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               396-586
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               397-586
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               397-586
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               398-581
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               103, 9
               

               Conread position:
               406-580
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               415-580
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               442-586
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.