Cow genome map

Conread name: rhlv23b_j22.y1

Conread position: 326-506
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 334-519
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 28

Conread position: 335-586
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 76

Conread position: 336-574
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 158, 18

Conread position: 338-492
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 339-491
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 339-583
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 339-586
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 152, 58

Conread position: 339-586
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 155, 0

Conread position: 340-492
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 104, 0

Conread position: 340-581
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 341-502
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 341-519
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 7

Conread position: 341-579
Cow position:
Alignm length: 248
Alignm identity: 163
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 137, 7

Conread position: 341-579
Cow position:
Alignm length: 244
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 34

Conread position: 341-579
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 148, 69

Conread position: 341-583
Cow position:
Alignm length: 248
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 0

Conread position: 341-583
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 162, 27

Conread position: 341-586
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 152

Conread position: 341-586
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 341-586
Cow position:
Alignm length: 251
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 142, 34

Conread position: 341-586
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 72

Conread position: 341-586
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 28

Conread position: 341-586
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 9

Conread position: 342-583
Cow position:
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 157, 23

Conread position: 342-583
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 152, 97

Conread position: 346-490
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 59

Conread position: 346-492
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 346-503
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 22

Conread position: 346-507
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 0

Conread position: 346-511
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 148, 0

Conread position: 346-517
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 130

Conread position: 346-520
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 155, 70

Conread position: 346-520
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 21

Conread position: 346-520
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 346-520
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 155, 9

Conread position: 346-520
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 346-549
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 150, 0

Conread position: 346-575
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 21

Conread position: 346-577
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 24

Conread position: 346-577
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 74

Conread position: 346-578
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 17, 206

Conread position: 346-579
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 15

Conread position: 346-580
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 87

Conread position: 346-580
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 148, 0

Conread position: 346-580
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 346-580
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 148, 213

Conread position: 346-583
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 148, 82

Conread position: 346-583
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 19, 134

Conread position: 346-583
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 148, 10

Conread position: 346-583
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 155, 92

Conread position: 346-583
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 122, 16

Conread position: 346-583
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 7, 152

Conread position: 346-586
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 152

Conread position: 346-586
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 0

Conread position: 346-586
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 151

Conread position: 346-586
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 153, 10

Conread position: 346-586
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 146, 70

Conread position: 346-586
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 346-586
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 156

Conread position: 346-586
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 145, 68

Conread position: 346-586
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 155, 107

Conread position: 346-586
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 10, 165

Conread position: 346-586
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 23

Conread position: 346-586
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 211, 17

Conread position: 347-552
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 144, 0

Conread position: 347-577
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 151, 0

Conread position: 347-586
Cow position:
Alignm length: 242
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 154, 81

Conread position: 347-586
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 85

Conread position: 347-586
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 150, 22

Conread position: 348-578
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 86

Conread position: 348-582
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 348-583
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 348-586
Cow position:
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 150, 56

Conread position: 349-585
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 145, 18

Conread position: 350-492
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 15, 0

Conread position: 350-586
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 175

Conread position: 351-580
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 143, 11

Conread position: 351-583
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 141, 18

Conread position: 352-513
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 352-586
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 156, 0

Conread position: 353-575
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 80

Conread position: 353-583
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 80

Conread position: 353-586
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 148, 14

Conread position: 354-580
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 62

Conread position: 355-586
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 356-583
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 356-583
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 356-583
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 140, 103

Conread position: 356-583
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 356-586
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 138, 94

Conread position: 357-520
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 357-580
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 144, 75

Conread position: 357-586
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 15, 136

Conread position: 357-586
Cow position:
Alignm length: 231
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 68

Conread position: 357-586
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 137, 12

Conread position: 358-580
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 358-586
Cow position:
Alignm length: 232
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 19

Conread position: 359-585
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 139

Conread position: 359-586
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 166, 115

Conread position: 359-586
Cow position:
Alignm length: 240
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 362-574
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 12

Conread position: 362-582
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 48

Conread position: 363-576
Cow position:
Alignm length: 218
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 162

Conread position: 363-583
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 131, 79

Conread position: 363-586
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 19

Conread position: 364-561
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 70

Conread position: 367-536
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 107

Conread position: 369-583
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 369-586
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 127, 151

Conread position: 370-586
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 123, 0

Conread position: 375-586
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 23

Conread position: 377-586
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 123, 117

Conread position: 378-586
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 379-583
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 380-586
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 382-579
Cow position:
Alignm length: 200
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 94

Conread position: 383-579
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 54

Conread position: 392-583
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 102, 164

Conread position: 392-586
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 99, 111

Conread position: 393-586
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 133

Conread position: 396-586
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 396-586
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 398-549
Cow position:
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 398-578
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 112

Conread position: 398-578
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 118, 110

Conread position: 398-586
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 31

Conread position: 402-586
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 83, 16

Conread position: 415-577
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 415-581
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 109

Conread position: 420-586
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 424-585
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 433-586
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 433-586
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 69, 54

Show alignments to all cow chromosomes.