Cow genome map


           Conread name:
           rhlv23b_j22.y1
        

               Conread position:
               311-583
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               333-586
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               168, 14
               

               Conread position:
               334-510
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               160, 37
               

               Conread position:
               339-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               160, 128
               

               Conread position:
               340-580
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               341-475
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               341-580
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               341-580
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               160, 92
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 87
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               155, 34
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               346-503
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 86
               

               Conread position:
               346-515
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               346-567
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               346-573
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               346-574
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               346-576
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 181
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               346-582
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 87
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               156, 21
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               103, 21
               

               Conread position:
               346-584
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               132, 86
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               347-579
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               143, 14
               

               Conread position:
               348-519
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               348-567
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               348-577
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               141, 176
               

               Conread position:
               348-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               129, 19
               

               Conread position:
               348-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               348-586
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               151, 19
               

               Conread position:
               349-574
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               349-576
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               349-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               77, 177
               

               Conread position:
               350-583
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               350-584
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               351-575
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               351-576
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               8, 146
               

               Conread position:
               351-585
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               145, 27
               

               Conread position:
               351-586
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               150, 216
               

               Conread position:
               351-586
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               352-477
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               352-495
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               352-580
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               147, 199
               

               Conread position:
               352-586
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               142, 209
               

               Conread position:
               353-583
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               353-586
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               355-575
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 119
               

               Conread position:
               355-576
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               357-583
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               358-492
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               360-520
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               134, 71
               

               Conread position:
               362-586
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               365-567
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               366-492
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               367-497
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               369-580
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               370-580
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               136, 153
               

               Conread position:
               370-583
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               375-586
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               378-583
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               120, 85
               

               Conread position:
               379-577
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               379-586
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               122, 53
               

               Conread position:
               385-577
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               392-579
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               102, 163
               

               Conread position:
               395-584
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 128
               

               Conread position:
               397-583
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               104, 120
               

               Conread position:
               398-583
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 166
               

               Conread position:
               401-583
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               407-583
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               424-583
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 101
               

               Conread position:
               424-586
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               130, 97
               

               Conread position:
               425-583
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               429-583
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 128
               

               Conread position:
               433-583
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               436-586
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 136
               
Show alignments to all cow chromosomes.