Cow genome map

Conread name: rhlv23b_j22.y1

Conread position: 311-583
Cow position: chr15:47773321-47773585 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 30

Conread position: 333-586
Cow position: chr15:36952057-36952307 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 168, 14

Conread position: 334-510
Cow position: chr15:16908579-16908402 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 160, 37

Conread position: 339-586
Cow position: chr15:51307539-51307778 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 160, 128

Conread position: 340-580
Cow position: chr15:36259463-36259699 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 22

Conread position: 341-475
Cow position: chr15:13515506-13515373 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 341-580
Cow position: chr15:12304779-12304537 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 158, 0

Conread position: 341-580
Cow position: chr15:22553401-22553643 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 160, 92

Conread position: 341-583
Cow position: chr15:21893919-21893675 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 87

Conread position: 341-583
Cow position: chr15:49274089-49273857 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 28

Conread position: 341-586
Cow position: chr15:16112539-16112286 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 155, 34

Conread position: 341-586
Cow position: chr15:38827187-38827423 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 341-586
Cow position: chr15:46563348-46563585 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 346-503
Cow position: chr15:78707-78553 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 86

Conread position: 346-515
Cow position: chr15:44237552-44237384 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 346-567
Cow position: chr15:17763040-17762819 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 20

Conread position: 346-573
Cow position: chr15:23696777-23696997 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 16

Conread position: 346-574
Cow position: chr15:14888507-14888733 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 109

Conread position: 346-576
Cow position: chr15:5420747-5420980 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 181

Conread position: 346-580
Cow position: chr15:10442370-10442613 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 47

Conread position: 346-580
Cow position: chr15:41125437-41125659 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 118, 21

Conread position: 346-582
Cow position: chr15:16261447-16261226 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 161, 17

Conread position: 346-583
Cow position: chr15:3695768-3695532 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 149, 87

Conread position: 346-583
Cow position: chr15:14870877-14870650 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 87

Conread position: 346-583
Cow position: chr15:24967924-24967696 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 22

Conread position: 346-583
Cow position: chr15:36353804-36353561 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 153, 0

Conread position: 346-583
Cow position: chr15:39598377-39598140 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 156, 21

Conread position: 346-583
Cow position: chr15:40835248-40835010 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 24

Conread position: 346-583
Cow position: chr15:47042494-47042748 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 21

Conread position: 346-584
Cow position: chr15:3700152-3700390 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 62

Conread position: 346-586
Cow position: chr15:275789-275535 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 132, 86

Conread position: 346-586
Cow position: chr15:1722715-1722949 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 21

Conread position: 346-586
Cow position: chr15:14988125-14987887 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 20

Conread position: 346-586
Cow position: chr15:20391141-20391385 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 33

Conread position: 346-586
Cow position: chr15:30470836-30471087 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 148, 0

Conread position: 347-579
Cow position: chr15:24994380-24994612 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 143, 14

Conread position: 348-519
Cow position: chr15:40594370-40594543 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 57

Conread position: 348-567
Cow position: chr15:26404414-26404199 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 348-577
Cow position: chr15:4694877-4694652 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 141, 176

Conread position: 348-586
Cow position: chr15:225671-225911 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 19

Conread position: 348-586
Cow position: chr15:13432622-13432374 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 348-586
Cow position: chr15:26158466-26158707 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 151, 19

Conread position: 349-574
Cow position: chr15:8354174-8353945 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 145, 0

Conread position: 349-576
Cow position: chr15:33306242-33306022 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 349-586
Cow position: chr15:26851093-26851332 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 177

Conread position: 350-583
Cow position: chr15:50333113-50332870 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 87

Conread position: 350-584
Cow position: chr15:13395679-13395437 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 19

Conread position: 351-575
Cow position: chr15:33643224-33642993 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 351-576
Cow position: chr15:25907041-25906820 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 146

Conread position: 351-585
Cow position: chr15:49483756-49483519 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 145, 27

Conread position: 351-586
Cow position: chr15:47843962-47844196 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 150, 216

Conread position: 351-586
Cow position: chr15:49784153-49784389 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 352-477
Cow position: chr15:34751215-34751094 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 352-495
Cow position: chr15:42789019-42789161 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 11

Conread position: 352-580
Cow position: chr15:244911-244680 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 147, 199

Conread position: 352-586
Cow position: chr15:14576458-14576219 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 142, 209

Conread position: 353-583
Cow position: chr15:17870153-17870397 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 353-586
Cow position: chr15:53716563-53716326 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 139, 0

Conread position: 355-575
Cow position: chr15:23275669-23275436 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 119

Conread position: 355-576
Cow position: chr15:17337489-17337274 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 356-583
Cow position: chr15:6037327-6037551 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 79

Conread position: 356-583
Cow position: chr15:11011477-11011698 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 0

Conread position: 357-583
Cow position: chr15:30986170-30986391 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 358-492
Cow position: chr15:6905198-6905067 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 360-520
Cow position: chr15:25650291-25650451 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 71

Conread position: 362-586
Cow position: chr15:662347-662572 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 144

Conread position: 365-567
Cow position: chr15:24982061-24982268 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 366-492
Cow position: chr15:9879261-9879388 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 367-497
Cow position: chr15:16307537-16307407 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 369-580
Cow position: chr15:49132171-49131957 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 370-580
Cow position: chr15:30316455-30316662 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 136, 153

Conread position: 370-583
Cow position: chr15:26442327-26442109 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 120, 0

Conread position: 375-586
Cow position: chr15:19002169-19002391 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 378-583
Cow position: chr15:36887939-36887734 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 120, 85

Conread position: 379-577
Cow position: chr15:26079251-26079445 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 379-586
Cow position: chr15:11908848-11909055 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 53

Conread position: 385-577
Cow position: chr15:26896597-26896798 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 392-579
Cow position: chr15:34223956-34223766 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 163

Conread position: 395-584
Cow position: chr15:36422699-36422512 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 128

Conread position: 397-583
Cow position: chr15:41475745-41475932 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 120

Conread position: 398-583
Cow position: chr15:28099196-28099007 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 166

Conread position: 401-583
Cow position: chr15:14964086-14964265 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 407-583
Cow position: chr15:46283842-46284021 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 424-583
Cow position: chr15:26849479-26849637 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 101

Conread position: 424-586
Cow position: chr15:40000979-40000818 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 130, 97

Conread position: 425-583
Cow position: chr15:18703878-18704038 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 429-583
Cow position: chr15:848696-848542 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 128

Conread position: 433-583
Cow position: chr15:840099-840252 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 436-586
Cow position: chr15:53005893-53006043 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 136

Show alignments to all cow chromosomes.