Cow genome map

Conread name: rhlv23b_j22.y1

Conread position: 333-563
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 158, 29

Conread position: 334-586
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 29

Conread position: 339-586
Cow position:
Alignm length: 249
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 23

Conread position: 340-582
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 27

Conread position: 340-583
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 152, 27

Conread position: 341-506
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 341-575
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 7

Conread position: 341-583
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 153, 22

Conread position: 342-506
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 14

Conread position: 342-520
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 27

Conread position: 342-584
Cow position:
Alignm length: 243
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 152, 0

Conread position: 345-580
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 107

Conread position: 346-492
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 346-492
Cow position:
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 346-509
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 56

Conread position: 346-520
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 109

Conread position: 346-520
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 148, 21

Conread position: 346-521
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 146, 10

Conread position: 346-556
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 145, 20

Conread position: 346-575
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 346-575
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 149

Conread position: 346-575
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 30

Conread position: 346-576
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 6, 149

Conread position: 346-577
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 12, 24

Conread position: 346-577
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 142

Conread position: 346-579
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 87

Conread position: 346-580
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 27

Conread position: 346-580
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 148, 21

Conread position: 346-580
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 145, 23

Conread position: 346-580
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 9

Conread position: 346-581
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 102

Conread position: 346-583
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 346-583
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 136

Conread position: 346-583
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 148, 0

Conread position: 346-583
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 146, 184

Conread position: 346-583
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 9

Conread position: 346-583
Cow position:
Alignm length: 242
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 31

Conread position: 346-583
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 75, 15

Conread position: 346-583
Cow position:
Alignm length: 251
Alignm identity: 190
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 16, 0

Conread position: 346-583
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 155, 23

Conread position: 346-583
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 157, 59

Conread position: 346-583
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 25

Conread position: 346-584
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 148, 10

Conread position: 346-584
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 148, 10

Conread position: 346-586
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 19

Conread position: 346-586
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 15, 163

Conread position: 346-586
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 346-586
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 346-586
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 153, 85

Conread position: 346-586
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 144, 26

Conread position: 346-586
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 147, 0

Conread position: 346-586
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 153, 26

Conread position: 346-586
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 346-586
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 145, 0

Conread position: 346-586
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 0

Conread position: 346-586
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 346-586
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 151

Conread position: 347-586
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 30

Conread position: 347-586
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 77, 16

Conread position: 348-583
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 22, 227

Conread position: 348-586
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 348-586
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 162, 144

Conread position: 349-507
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 152, 63

Conread position: 349-580
Cow position:
Alignm length: 233
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 13, 146

Conread position: 349-583
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 152, 20

Conread position: 349-583
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 145, 210

Conread position: 349-585
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 205, 145

Conread position: 350-583
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 143, 84

Conread position: 351-583
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 352-511
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 352-576
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 77

Conread position: 352-586
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 140, 27

Conread position: 353-586
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 353-586
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 14

Conread position: 354-583
Cow position:
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 22

Conread position: 355-462
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 355-567
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 50

Conread position: 355-586
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 93, 20

Conread position: 355-586
Cow position:
Alignm length: 233
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 151

Conread position: 355-586
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 357-580
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 10

Conread position: 357-583
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 357-586
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 36

Conread position: 357-586
Cow position:
Alignm length: 233
Alignm identity: 173
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 137, 0

Conread position: 358-507
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 359-586
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 142, 206

Conread position: 360-580
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 112

Conread position: 362-490
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 362-580
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 362-583
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 362-586
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 112

Conread position: 363-583
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 110

Conread position: 363-586
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 364-583
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 130, 170

Conread position: 364-586
Cow position:
Alignm length: 223
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 189, 0

Conread position: 366-580
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 135, 0

Conread position: 369-520
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 369-586
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 370-586
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 82

Conread position: 370-586
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 97

Conread position: 371-583
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 375-586
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 119, 0

Conread position: 377-492
Cow position:
Alignm length: 116
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 380-575
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 119, 148

Conread position: 380-583
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 111, 0

Conread position: 380-586
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 98

Conread position: 386-580
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 392-586
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 396-578
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 127

Conread position: 396-586
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 399-586
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 69

Conread position: 402-583
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 405-586
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 60

Conread position: 406-576
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 70

Conread position: 413-580
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 416-586
Cow position:
Alignm length: 175
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 21

Show alignments to all cow chromosomes.