Cow genome map

Conread name: rhlv23b_j22.y1

Conread position: 333-583
Cow position: chr25:22315137-22315396 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 338-586
Cow position: chr25:19129799-19130049 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 29

Conread position: 339-497
Cow position: chr25:40931221-40931374 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 9

Conread position: 339-586
Cow position: chr25:35762536-35762783 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 31

Conread position: 341-576
Cow position: chr25:13443464-13443222 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 46

Conread position: 341-579
Cow position: chr25:13272516-13272757 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 160, 35

Conread position: 341-579
Cow position: chr25:21893285-21893522 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 31

Conread position: 341-580
Cow position: chr25:26089867-26089638 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 53

Conread position: 341-583
Cow position: chr25:21668195-21668440 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 9

Conread position: 343-579
Cow position: chr25:14791705-14791942 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 154, 89

Conread position: 345-586
Cow position: chr25:4488869-4489099 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 237, 30

Conread position: 346-492
Cow position: chr25:6683111-6682965 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 346-492
Cow position: chr25:19478626-19478772 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 346-506
Cow position: chr25:4947913-4948073 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 346-520
Cow position: chr25:9843127-9843304 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 153, 0

Conread position: 346-558
Cow position: chr25:15714825-15715039 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 148, 10

Conread position: 346-574
Cow position: chr25:23245049-23244821 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 155, 15

Conread position: 346-576
Cow position: chr25:20023436-20023209 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 134

Conread position: 346-580
Cow position: chr25:16319190-16318961 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 178

Conread position: 346-580
Cow position: chr25:18721169-18720938 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 47

Conread position: 346-580
Cow position: chr25:19364107-19363871 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 24

Conread position: 346-581
Cow position: chr25:23829177-23828940 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 152, 46

Conread position: 346-583
Cow position: chr25:3992736-3992972 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 60, 84

Conread position: 346-586
Cow position: chr25:7750403-7750642 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 143, 179

Conread position: 346-586
Cow position: chr25:8120734-8120976 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 97

Conread position: 346-586
Cow position: chr25:11436856-11436629 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 346-586
Cow position: chr25:13621406-13621167 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 83

Conread position: 346-586
Cow position: chr25:21191440-21191672 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 148, 0

Conread position: 347-580
Cow position: chr25:1840275-1840510 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 178

Conread position: 347-583
Cow position: chr25:36746494-36746256 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 20

Conread position: 347-586
Cow position: chr25:7641500-7641260 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 54

Conread position: 347-586
Cow position: chr25:15273627-15273859 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 348-497
Cow position: chr25:14157576-14157726 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 148

Conread position: 348-578
Cow position: chr25:26306251-26306016 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 122, 126

Conread position: 348-583
Cow position: chr25:9269303-9269532 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 132, 27

Conread position: 349-580
Cow position: chr25:22298590-22298821 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 121

Conread position: 349-583
Cow position: chr25:33550464-33550703 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 18

Conread position: 349-586
Cow position: chr25:7007864-7008115 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 349-586
Cow position: chr25:18810297-18810526 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 138, 0

Conread position: 350-492
Cow position: chr25:7379191-7379050 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 350-577
Cow position: chr25:11432990-11432766 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 144, 0

Conread position: 351-520
Cow position: chr25:23505008-23505182 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 0

Conread position: 351-520
Cow position: chr25:26238814-26238991 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 351-572
Cow position: chr25:17190789-17190573 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 61

Conread position: 351-579
Cow position: chr25:35339232-35339002 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 16

Conread position: 351-580
Cow position: chr25:22348508-22348269 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 351-586
Cow position: chr25:3346238-3346005 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 145, 81

Conread position: 352-580
Cow position: chr25:19679312-19679541 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 352-586
Cow position: chr25:12510052-12509826 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 352-586
Cow position: chr25:28597655-28597409 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 352-586
Cow position: chr25:40682694-40682932 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 11, 65

Conread position: 353-586
Cow position: chr25:14720703-14720927 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 354-580
Cow position: chr25:26072597-26072374 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 13

Conread position: 354-583
Cow position: chr25:4157282-4157055 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 23

Conread position: 354-586
Cow position: chr25:4521878-4521646 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 145, 78

Conread position: 354-586
Cow position: chr25:17975418-17975204 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 355-485
Cow position: chr25:14211591-14211719 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 355-580
Cow position: chr25:7799509-7799741 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 146, 12

Conread position: 356-583
Cow position: chr25:20785625-20785395 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 136, 107

Conread position: 357-574
Cow position: chr25:36872321-36872546 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 12

Conread position: 357-583
Cow position: chr25:13826399-13826623 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 358-571
Cow position: chr25:9107560-9107353 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 358-578
Cow position: chr25:22178881-22179097 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 358-584
Cow position: chr25:35109306-35109086 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 147, 0

Conread position: 359-583
Cow position: chr25:18288805-18288578 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 58

Conread position: 360-580
Cow position: chr25:13222865-13223086 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 138, 217

Conread position: 363-492
Cow position: chr25:15254381-15254251 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 363-572
Cow position: chr25:2624766-2624975 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 131, 15

Conread position: 363-586
Cow position: chr25:20523269-20523043 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 196

Conread position: 364-584
Cow position: chr25:20008101-20008327 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 364-586
Cow position: chr25:9990141-9989907 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 157, 0

Conread position: 369-586
Cow position: chr25:26679200-26679422 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 122, 0

Conread position: 370-529
Cow position: chr25:15463562-15463724 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 370-586
Cow position: chr25:28668076-28667855 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 22

Conread position: 371-585
Cow position: chr25:7673271-7673501 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 375-576
Cow position: chr25:36873353-36873152 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 382-583
Cow position: chr25:9574143-9573943 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 111, 50

Conread position: 383-579
Cow position: chr25:20202901-20203096 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 389-586
Cow position: chr25:35902741-35902941 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 130, 187

Conread position: 392-572
Cow position: chr25:8347649-8347834 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 392-577
Cow position: chr25:11760453-11760274 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 392-580
Cow position: chr25:31657280-31657091 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 392-583
Cow position: chr25:30852764-30852957 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 392-586
Cow position: chr25:23998927-23998744 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 394-576
Cow position: chr25:32453417-32453245 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 398-586
Cow position: chr25:11060135-11060330 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 399-586
Cow position: chr25:24115312-24115120 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 404-583
Cow position: chr25:15349896-15349717 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 45

Conread position: 405-585
Cow position: chr25:22734018-22734200 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 53

Conread position: 406-586
Cow position: chr25:14209996-14210171 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 407-583
Cow position: chr25:31926365-31926192 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 419-583
Cow position: chr25:18934611-18934444 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 421-583
Cow position: chr25:10856688-10856524 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 138

Show alignments to all cow chromosomes.