Cow genome map
| Conread name: | rhlv23b_j22.y1 |
| Conread position: | 312-583 |
| Cow position: | chr26:6487861-6487581 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 335-586 |
| Cow position: | chr26:7314580-7314842 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 339-580 |
| Cow position: | chr26:32897906-32897672 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 340-515 |
| Cow position: | chr26:26537560-26537379 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 340-586 |
| Cow position: | chr26:678015-677747 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 151, 27 |
| Conread position: | 340-586 |
| Cow position: | chr26:5836854-5836604 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 341-573 |
| Cow position: | chr26:27491533-27491295 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 341-577 |
| Cow position: | chr26:4854507-4854748 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 122 |
| Conread position: | 341-580 |
| Cow position: | chr26:25526215-25526454 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 129, 26 |
| Conread position: | 341-586 |
| Cow position: | chr26:32670528-32670283 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 341-586 |
| Cow position: | chr26:32815824-32815575 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 138, 26 |
| Conread position: | 346-561 |
| Cow position: | chr26:24240648-24240872 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 346-576 |
| Cow position: | chr26:35704359-35704577 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 346-577 |
| Cow position: | chr26:16783794-16784029 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 346-582 |
| Cow position: | chr26:20769821-20770060 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 346-583 |
| Cow position: | chr26:6514814-6515043 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 346-583 |
| Cow position: | chr26:21637068-21636841 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 145 |
| Conread position: | 346-583 |
| Cow position: | chr26:22892475-22892237 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 346-583 |
| Cow position: | chr26:28251122-28251364 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 199 |
| Conread position: | 346-586 |
| Cow position: | chr26:647754-647509 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 346-586 |
| Cow position: | chr26:9491896-9492132 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 346-586 |
| Cow position: | chr26:18825316-18825070 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 347-492 |
| Cow position: | chr26:14175254-14175398 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 347-586 |
| Cow position: | chr26:19636263-19636503 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 102, 196 |
| Conread position: | 347-586 |
| Cow position: | chr26:23924820-23925057 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 349-586 |
| Cow position: | chr26:20291718-20291479 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 350-575 |
| Cow position: | chr26:19446108-19446340 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 141, 54 |
| Conread position: | 351-586 |
| Cow position: | chr26:9535493-9535727 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 142, 112 |
| Conread position: | 351-586 |
| Cow position: | chr26:19591458-19591692 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 353-575 |
| Cow position: | chr26:28423262-28423488 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 353-580 |
| Cow position: | chr26:14481577-14481359 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 353-586 |
| Cow position: | chr26:12940377-12940621 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 138, 217 |
| Conread position: | 354-579 |
| Cow position: | chr26:26888155-26887931 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 147, 115 |
| Conread position: | 355-580 |
| Cow position: | chr26:7687265-7687035 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 12 |
| Conread position: | 355-583 |
| Cow position: | chr26:1328877-1328655 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 355-586 |
| Cow position: | chr26:8307549-8307318 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 136, 206 |
| Conread position: | 356-586 |
| Cow position: | chr26:33202091-33201857 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 359-575 |
| Cow position: | chr26:13802097-13802311 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 151, 8 |
| Conread position: | 361-577 |
| Cow position: | chr26:34611197-34610982 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 134 |
| Conread position: | 361-583 |
| Cow position: | chr26:34724886-34724664 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 140, 55 |
| Conread position: | 362-583 |
| Cow position: | chr26:4585224-4585001 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 369-583 |
| Cow position: | chr26:31137471-31137255 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 63 |
| Conread position: | 375-520 |
| Cow position: | chr26:33241888-33242032 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 379-586 |
| Cow position: | chr26:11875218-11875011 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 112, 177 |
| Conread position: | 384-583 |
| Cow position: | chr26:32517448-32517257 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 389-586 |
| Cow position: | chr26:33038210-33038012 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 138 |
| Conread position: | 395-583 |
| Cow position: | chr26:15132656-15132851 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 400-586 |
| Cow position: | chr26:13863010-13862825 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 32 |
| Conread position: | 412-580 |
| Cow position: | chr26:33112350-33112178 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 412-583 |
| Cow position: | chr26:10700867-10700693 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 128 |
Show alignments to all cow chromosomes.