Cow genome map
Conread name: | rhlv23b_j22.y1 |
Conread position: | 339-580 |
Cow position: | chr27:15409026-15409260 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 166 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 339-580 |
Cow position: | chr27:16705260-16705018 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 168 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 30, 39 |
Conread position: | 340-586 |
Cow position: | chr27:17397444-17397692 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 182 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 341-572 |
Cow position: | chr27:23890944-23890706 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 172 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 150, 34 |
Conread position: | 341-576 |
Cow position: | chr27:19660940-19660697 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 163 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 37, 22 |
Conread position: | 341-580 |
Cow position: | chr27:23485218-23484981 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 174 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 36, 91 |
Conread position: | 341-585 |
Cow position: | chr27:15865616-15865370 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 162 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 36, 185 |
Conread position: | 341-586 |
Cow position: | chr27:12459290-12459047 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 177 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 129, 36 |
Conread position: | 341-586 |
Cow position: | chr27:20092824-20093054 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 176 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 13, 140 |
Conread position: | 342-583 |
Cow position: | chr27:23994414-23994653 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 178 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 145, 25 |
Conread position: | 345-580 |
Cow position: | chr27:29615056-29614807 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 176 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 57, 17 |
Conread position: | 346-477 |
Cow position: | chr27:16625899-16625772 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 346-507 |
Cow position: | chr27:4673020-4672854 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 346-566 |
Cow position: | chr27:28478583-28478363 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 154 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 171, 148 |
Conread position: | 346-574 |
Cow position: | chr27:19685710-19685939 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 170 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 155, 174 |
Conread position: | 346-574 |
Cow position: | chr27:23107900-23108131 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 171 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 19, 70 |
Conread position: | 346-574 |
Cow position: | chr27:27694770-27695004 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 175 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 17, 24 |
Conread position: | 346-576 |
Cow position: | chr27:435236-435001 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 171 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 114, 36 |
Conread position: | 346-580 |
Cow position: | chr27:22035374-22035606 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 166 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 176, 0 |
Conread position: | 346-580 |
Cow position: | chr27:26865117-26865343 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 162 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 137, 28 |
Conread position: | 346-583 |
Cow position: | chr27:16284478-16284251 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 167 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 31, 9 |
Conread position: | 346-583 |
Cow position: | chr27:20897022-20897258 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 168 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 126, 85 |
Conread position: | 346-583 |
Cow position: | chr27:22220557-22220312 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 164 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 148, 0 |
Conread position: | 346-586 |
Cow position: | chr27:426971-426729 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 177 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 145, 21 |
Conread position: | 346-586 |
Cow position: | chr27:590759-591010 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 169 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 16, 27 |
Conread position: | 346-586 |
Cow position: | chr27:19509016-19508771 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 177 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 346-586 |
Cow position: | chr27:22171301-22171061 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 173 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 13, 87 |
Conread position: | 346-586 |
Cow position: | chr27:23560029-23560271 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 169 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 167, 23 |
Conread position: | 346-586 |
Cow position: | chr27:29164773-29164534 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 165 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 155, 86 |
Conread position: | 346-586 |
Cow position: | chr27:31210549-31210309 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 175 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 36, 26 |
Conread position: | 347-575 |
Cow position: | chr27:12425289-12425058 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 163 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 64, 14 |
Conread position: | 347-586 |
Cow position: | chr27:15668769-15669015 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 164 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 347-586 |
Cow position: | chr27:26999420-26999664 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 144, 152 |
Conread position: | 347-586 |
Cow position: | chr27:27389018-27389268 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 172 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 16, 33 |
Conread position: | 348-583 |
Cow position: | chr27:30407035-30407285 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 175 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 18, 87 |
Conread position: | 348-586 |
Cow position: | chr27:20828709-20828945 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 160 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 171, 139 |
Conread position: | 350-586 |
Cow position: | chr27:15454207-15453972 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 166 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 144, 75 |
Conread position: | 352-586 |
Cow position: | chr27:4944517-4944747 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 163 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 166, 0 |
Conread position: | 352-586 |
Cow position: | chr27:27055284-27055055 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 9, 80 |
Conread position: | 353-580 |
Cow position: | chr27:20517654-20517417 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 161 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 353-586 |
Cow position: | chr27:26617399-26617174 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 165 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 354-566 |
Cow position: | chr27:20067979-20068196 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 155 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 10, 55 |
Conread position: | 354-580 |
Cow position: | chr27:23452457-23452228 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 165 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 24, 67 |
Conread position: | 355-579 |
Cow position: | chr27:16786824-16786597 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 152 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 11, 117 |
Conread position: | 355-580 |
Cow position: | chr27:31169117-31169340 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 163 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 145, 12 |
Conread position: | 356-506 |
Cow position: | chr27:8405829-8405977 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 111 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 356-586 |
Cow position: | chr27:19388012-19387780 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 165 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 9, 64 |
Conread position: | 357-583 |
Cow position: | chr27:27632609-27632831 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 157 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 152, 94 |
Conread position: | 357-586 |
Cow position: | chr27:14670390-14670621 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 357-586 |
Cow position: | chr27:30890281-30890060 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 157 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 156, 10 |
Conread position: | 358-583 |
Cow position: | chr27:299390-299612 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 162 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 26, 16 |
Conread position: | 359-581 |
Cow position: | chr27:7412383-7412158 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 159 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 359-582 |
Cow position: | chr27:6319910-6319685 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 164 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 5, 168 |
Conread position: | 360-586 |
Cow position: | chr27:21669128-21669353 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 171 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 180, 137 |
Conread position: | 360-586 |
Cow position: | chr27:23594312-23594078 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 164 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 11, 84 |
Conread position: | 363-506 |
Cow position: | chr27:16589716-16589859 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 122, 115 |
Conread position: | 363-520 |
Cow position: | chr27:30489424-30489584 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 363-549 |
Cow position: | chr27:20481379-20481560 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 138 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 131, 69 |
Conread position: | 365-586 |
Cow position: | chr27:7343444-7343669 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 166 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 99, 123 |
Conread position: | 365-586 |
Cow position: | chr27:15002994-15003220 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 171 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 366-583 |
Cow position: | chr27:29493914-29494136 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 30, 173 |
Conread position: | 375-520 |
Cow position: | chr27:788823-788970 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 375-583 |
Cow position: | chr27:6106674-6106469 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 117, 53 |
Conread position: | 375-583 |
Cow position: | chr27:7425214-7425426 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 149 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 376-586 |
Cow position: | chr27:23957489-23957277 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 149 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 51, 35 |
Conread position: | 378-586 |
Cow position: | chr27:13204430-13204224 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 107, 55 |
Conread position: | 381-586 |
Cow position: | chr27:24223922-24223714 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 12, 60 |
Conread position: | 382-580 |
Cow position: | chr27:26323415-26323207 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 87, 19 |
Conread position: | 384-586 |
Cow position: | chr27:22547434-22547629 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 139 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 385-580 |
Cow position: | chr27:24693377-24693183 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 139 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 111, 57 |
Conread position: | 389-586 |
Cow position: | chr27:19576363-19576564 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 390-574 |
Cow position: | chr27:26504261-26504075 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 139 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 104, 42 |
Conread position: | 395-576 |
Cow position: | chr27:15859343-15859528 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 96, 37 |
Conread position: | 395-586 |
Cow position: | chr27:11134040-11133847 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 106, 41 |
Conread position: | 398-578 |
Cow position: | chr27:27528870-27529047 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 86, 7 |
Conread position: | 399-586 |
Cow position: | chr27:2949377-2949557 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 132 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 404-586 |
Cow position: | chr27:20325089-20324898 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 98, 89 |
Conread position: | 416-583 |
Cow position: | chr27:3498484-3498318 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 117 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 422-586 |
Cow position: | chr27:31183503-31183329 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 126 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 441-583 |
Cow position: | chr27:28062290-28062432 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.