Cow genome map

Conread name: rhlv23b_j22.y1

Conread position: 334-586
Cow position: chr28:12430554-12430807 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 42

Conread position: 335-520
Cow position: chr28:7498199-7498012 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 159, 13

Conread position: 335-578
Cow position: chr28:10964371-10964600 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 339-492
Cow position: chr28:27161374-27161223 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 339-503
Cow position: chr28:2862819-2862982 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 9

Conread position: 339-518
Cow position: chr28:11752189-11752008 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 340-558
Cow position: chr28:22345973-22346199 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 152, 0

Conread position: 340-577
Cow position: chr28:9684378-9684144 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 182, 23

Conread position: 341-506
Cow position: chr28:7865281-7865447 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 29

Conread position: 341-583
Cow position: chr28:19564275-19564036 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 168

Conread position: 341-586
Cow position: chr28:10863830-10863598 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 158, 15

Conread position: 341-586
Cow position: chr28:20759745-20759491 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 151, 22

Conread position: 342-507
Cow position: chr28:33051989-33052158 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 342-586
Cow position: chr28:4185858-4186105 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 53

Conread position: 346-492
Cow position: chr28:2762154-2762299 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 346-492
Cow position: chr28:2960873-2960726 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 346-492
Cow position: chr28:5128771-5128624 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 346-509
Cow position: chr28:16246108-16245941 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 88

Conread position: 346-519
Cow position: chr28:12070195-12070365 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 46

Conread position: 346-520
Cow position: chr28:2131966-2131789 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 148, 0

Conread position: 346-576
Cow position: chr28:3914672-3914897 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 16, 151

Conread position: 346-577
Cow position: chr28:4045808-4046037 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 150, 21

Conread position: 346-580
Cow position: chr28:5139036-5138803 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 154

Conread position: 346-580
Cow position: chr28:11079267-11079496 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 125, 20

Conread position: 346-580
Cow position: chr28:11527300-11527063 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 161, 91

Conread position: 346-580
Cow position: chr28:11884559-11884335 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 346-580
Cow position: chr28:21844916-21845147 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 148, 46

Conread position: 346-580
Cow position: chr28:24966345-24966582 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 59

Conread position: 346-580
Cow position: chr28:25128844-25129080 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 87

Conread position: 346-583
Cow position: chr28:777632-777875 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 346-583
Cow position: chr28:4016493-4016722 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 346-583
Cow position: chr28:5074549-5074322 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 346-583
Cow position: chr28:8787500-8787738 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 35

Conread position: 346-583
Cow position: chr28:13474261-13474498 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 20

Conread position: 346-584
Cow position: chr28:1099701-1099477 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 30

Conread position: 346-586
Cow position: chr28:3445522-3445277 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 143, 36

Conread position: 346-586
Cow position: chr28:3492824-3492585 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 21

Conread position: 346-586
Cow position: chr28:5437127-5436884 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 130, 108

Conread position: 346-586
Cow position: chr28:10589063-10588831 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 133, 0

Conread position: 346-586
Cow position: chr28:11426581-11426346 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 146, 17

Conread position: 346-586
Cow position: chr28:21868416-21868659 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 150, 21

Conread position: 346-586
Cow position: chr28:29416759-29416523 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 86

Conread position: 346-586
Cow position: chr28:30937709-30937481 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 346-586
Cow position: chr28:31841384-31841144 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 148, 17

Conread position: 347-506
Cow position: chr28:4438671-4438830 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 141, 16

Conread position: 347-583
Cow position: chr28:22813221-22813447 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 25

Conread position: 347-586
Cow position: chr28:11422854-11422617 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 147, 85

Conread position: 347-586
Cow position: chr28:17949154-17948915 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 183, 161

Conread position: 348-505
Cow position: chr28:8022141-8021986 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 349-580
Cow position: chr28:4834883-4834647 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 197

Conread position: 350-586
Cow position: chr28:4884291-4884051 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 16

Conread position: 351-583
Cow position: chr28:24082233-24082469 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 148, 0

Conread position: 351-586
Cow position: chr28:3023952-3023714 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 17, 130

Conread position: 351-586
Cow position: chr28:4158918-4159166 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 145, 0

Conread position: 351-586
Cow position: chr28:10615983-10615748 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 6, 22

Conread position: 352-580
Cow position: chr28:11585238-11585013 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 157, 0

Conread position: 352-586
Cow position: chr28:20124748-20124983 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 171

Conread position: 353-586
Cow position: chr28:11816702-11816482 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 142

Conread position: 353-586
Cow position: chr28:17739788-17740027 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 66

Conread position: 354-586
Cow position: chr28:8347695-8347936 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 119

Conread position: 354-586
Cow position: chr28:9285403-9285175 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 147, 13

Conread position: 355-580
Cow position: chr28:25056933-25057152 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 116, 0

Conread position: 355-586
Cow position: chr28:7009012-7008779 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 355-586
Cow position: chr28:9636489-9636255 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 139, 12

Conread position: 355-586
Cow position: chr28:9705620-9705858 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 139, 77

Conread position: 356-583
Cow position: chr28:4070935-4071157 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 54, 109

Conread position: 356-583
Cow position: chr28:12991104-12991334 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 16

Conread position: 356-586
Cow position: chr28:3411019-3410787 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 154

Conread position: 356-586
Cow position: chr28:10977808-10978040 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 196

Conread position: 357-576
Cow position: chr28:16346562-16346346 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 83

Conread position: 357-583
Cow position: chr28:5254844-5255070 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 137, 12

Conread position: 357-583
Cow position: chr28:16370114-16369890 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 139, 183

Conread position: 357-586
Cow position: chr28:29989150-29988906 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 358-576
Cow position: chr28:26531306-26531089 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 16

Conread position: 358-583
Cow position: chr28:4013054-4013282 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 9

Conread position: 358-586
Cow position: chr28:3740845-3741071 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 137

Conread position: 358-586
Cow position: chr28:3746168-3746399 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 9

Conread position: 358-586
Cow position: chr28:4090084-4089859 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 141, 69

Conread position: 359-580
Cow position: chr28:4181970-4182197 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 179

Conread position: 359-584
Cow position: chr28:6975212-6975433 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 146, 0

Conread position: 361-586
Cow position: chr28:11346514-11346287 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 114

Conread position: 362-552
Cow position: chr28:4809753-4809943 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 165

Conread position: 362-586
Cow position: chr28:7132112-7131889 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 142, 10

Conread position: 362-586
Cow position: chr28:9740440-9740660 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 192, 130

Conread position: 362-586
Cow position: chr28:11828982-11828757 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 128, 38

Conread position: 363-586
Cow position: chr28:4006762-4006983 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 159, 6

Conread position: 363-586
Cow position: chr28:5205246-5205453 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 68

Conread position: 363-586
Cow position: chr28:7350629-7350852 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 131, 194

Conread position: 364-554
Cow position: chr28:10775737-10775541 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 90

Conread position: 364-580
Cow position: chr28:16919191-16918978 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 146, 5

Conread position: 364-586
Cow position: chr28:22332501-22332734 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 369-583
Cow position: chr28:8304228-8304441 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 41, 60

Conread position: 377-573
Cow position: chr28:4364833-4364637 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 54

Conread position: 379-586
Cow position: chr28:7557743-7557525 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 379-586
Cow position: chr28:8396326-8396527 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 382-576
Cow position: chr28:16879567-16879760 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 384-586
Cow position: chr28:30902122-30902323 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 395-583
Cow position: chr28:10890728-10890543 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 396-583
Cow position: chr28:4876451-4876637 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 396-583
Cow position: chr28:16362526-16362342 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 396-586
Cow position: chr28:9109224-9109413 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 412-580
Cow position: chr28:3678386-3678555 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 436-586
Cow position: chr28:27787614-27787766 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 438-586
Cow position: chr28:24238427-24238282 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 0

Show alignments to all cow chromosomes.