Cow genome map


           Conread name:
           rhlv23b_j22.y1
        

               Conread position:
               334-586
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               335-520
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               335-578
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               339-492
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               339-503
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               339-518
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               340-558
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               340-577
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               182, 23
               

               Conread position:
               341-506
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               151, 168
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               158, 15
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               151, 22
               

               Conread position:
               342-507
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               342-586
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               346-492
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               346-492
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               346-492
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               346-509
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               346-519
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               346-520
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               346-576
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               16, 151
               

               Conread position:
               346-577
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               150, 21
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 154
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               125, 20
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               161, 91
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               148, 46
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               143, 59
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 35
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               146, 20
               

               Conread position:
               346-584
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               143, 36
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               147, 21
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               130, 108
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               150, 21
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               148, 17
               

               Conread position:
               347-506
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               347-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               347-586
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               147, 85
               

               Conread position:
               347-586
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               183, 161
               

               Conread position:
               348-505
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               349-580
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 197
               

               Conread position:
               350-586
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               351-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               351-586
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               17, 130
               

               Conread position:
               351-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               351-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               352-580
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               352-586
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 171
               

               Conread position:
               353-586
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               353-586
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               354-586
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               354-586
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               147, 13
               

               Conread position:
               355-580
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               355-586
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               355-586
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 12
               

               Conread position:
               355-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 77
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               356-586
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               105, 154
               

               Conread position:
               356-586
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               357-576
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               144, 83
               

               Conread position:
               357-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               137, 12
               

               Conread position:
               357-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 183
               

               Conread position:
               357-586
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               358-576
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               358-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 137
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               141, 69
               

               Conread position:
               359-580
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 179
               

               Conread position:
               359-584
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               361-586
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 114
               

               Conread position:
               362-552
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               136, 165
               

               Conread position:
               362-586
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               142, 10
               

               Conread position:
               362-586
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               192, 130
               

               Conread position:
               362-586
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               363-586
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               159, 6
               

               Conread position:
               363-586
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 68
               

               Conread position:
               363-586
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               131, 194
               

               Conread position:
               364-554
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               46, 90
               

               Conread position:
               364-580
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               146, 5
               

               Conread position:
               364-586
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               369-583
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               377-573
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               117, 54
               

               Conread position:
               379-586
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               379-586
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               382-576
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               384-586
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               395-583
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               396-583
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               396-583
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               396-586
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               412-580
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               436-586
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               438-586
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               85, 0
               
Show alignments to all cow chromosomes.